Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L23
         (1222 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY095068-1|AAM11396.1|  110|Drosophila melanogaster RE14985p pro...   211   2e-54
AE014296-608|AAF47744.1|  110|Drosophila melanogaster CG17737-PA...   211   2e-54
U01182-1|AAC03566.1| 1256|Drosophila melanogaster flightless-I p...    30   7.4  
AF132184-1|AAD34772.1| 1256|Drosophila melanogaster unknown prot...    30   7.4  
AF017777-2|AAC28407.1| 1256|Drosophila melanogaster flightless p...    30   7.4  
AE014298-3118|AAF50830.2| 1256|Drosophila melanogaster CG1484-PA...    30   7.4  

>AY095068-1|AAM11396.1|  110|Drosophila melanogaster RE14985p
           protein.
          Length = 110

 Score =  211 bits (515), Expect = 2e-54
 Identities = 95/110 (86%), Positives = 103/110 (93%)
 Frame = +1

Query: 175 MSIQXLNTFDPFADAIKSSEDDVQXGLVHVRIQQRNGRKXLTTVQGLSSEYDLKKIVRAC 354
           MSIQ LNT DPFADAIK ++DD+Q GLVH+RIQQRNGRK LTTVQGLS+EYDLKKIVR+C
Sbjct: 1   MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSC 60

Query: 355 KKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 504
           KKEFACNGTV+EHPEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHGF
Sbjct: 61  KKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110


>AE014296-608|AAF47744.1|  110|Drosophila melanogaster CG17737-PA
           protein.
          Length = 110

 Score =  211 bits (515), Expect = 2e-54
 Identities = 95/110 (86%), Positives = 103/110 (93%)
 Frame = +1

Query: 175 MSIQXLNTFDPFADAIKSSEDDVQXGLVHVRIQQRNGRKXLTTVQGLSSEYDLKKIVRAC 354
           MSIQ LNT DPFADAIK ++DD+Q GLVH+RIQQRNGRK LTTVQGLS+EYDLKKIVR+C
Sbjct: 1   MSIQNLNTRDPFADAIKGNDDDIQDGLVHIRIQQRNGRKTLTTVQGLSAEYDLKKIVRSC 60

Query: 355 KKEFACNGTVVEHPEYGEVLQLQGDQRENICQWLTKSGLVKPEQLKVHGF 504
           KKEFACNGTV+EHPEYGEVLQLQGDQRENICQWLTK GL KP+QLKVHGF
Sbjct: 61  KKEFACNGTVIEHPEYGEVLQLQGDQRENICQWLTKVGLAKPDQLKVHGF 110


>U01182-1|AAC03566.1| 1256|Drosophila melanogaster flightless-I
           protein.
          Length = 1256

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 731 NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 823
           N  +N+I +IP  LF+ L D++FL+  +N +
Sbjct: 129 NLSNNQIESIPTPLFIHLTDLLFLDLSHNRL 159


>AF132184-1|AAD34772.1| 1256|Drosophila melanogaster unknown
           protein.
          Length = 1256

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 731 NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 823
           N  +N+I +IP  LF+ L D++FL+  +N +
Sbjct: 129 NLSNNQIESIPTPLFIHLTDLLFLDLSHNRL 159


>AF017777-2|AAC28407.1| 1256|Drosophila melanogaster flightless
           protein.
          Length = 1256

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 731 NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 823
           N  +N+I +IP  LF+ L D++FL+  +N +
Sbjct: 129 NLSNNQIESIPTPLFIHLTDLLFLDLSHNRL 159


>AE014298-3118|AAF50830.2| 1256|Drosophila melanogaster CG1484-PA
           protein.
          Length = 1256

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = +2

Query: 731 NNQSNEIVNIPNSLFLFLYDIVFLNCCNNSI 823
           N  +N+I +IP  LF+ L D++FL+  +N +
Sbjct: 129 NLSNNQIESIPTPLFIHLTDLLFLDLSHNRL 159


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,246,905
Number of Sequences: 53049
Number of extensions: 687905
Number of successful extensions: 1491
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1491
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6499020495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)