Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_L22
(1471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 35 0.17
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 35 0.17
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.17
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.17
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.17
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 33 0.39
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 33 0.39
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.51
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.51
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.51
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.90
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.90
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.90
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 2.1
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 2.1
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 31 2.7
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 2.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.6
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 30 4.8
U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-li... 30 4.8
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 4.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 8.3
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 8.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 8.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 8.3
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 29 8.3
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical protein
C34D4.11 protein.
Length = 136
Score = 34.7 bits (76), Expect = 0.17
Identities = 24/75 (32%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = -2
Query: 1431 WGGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGR-XVXSXGGXXAXQ 1255
WGG G G G G G R G G GG G GR GG
Sbjct: 48 WGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGG 107
Query: 1254 GGVXXXGXXAXXGRG 1210
GG G GRG
Sbjct: 108 GGGRGGGGGGGGGRG 122
Score = 31.9 bits (69), Expect = 1.2
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = -2
Query: 1443 GGXVWGGXGX-GXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGRXVXSXGGX 1267
GG GG G G GG G G G G GGG GR G GG
Sbjct: 65 GGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGG 124
Query: 1266 XAXQGG 1249
+GG
Sbjct: 125 GGGRGG 130
Score = 31.9 bits (69), Expect = 1.2
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -2
Query: 1443 GGXVWGGXGXGXGGRXXGXXXXGXRRGXXXFXGAGG 1336
GG GG G G GGR G G R G G GG
Sbjct: 97 GGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGG 132
Score = 31.1 bits (67), Expect = 2.1
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = -2
Query: 1443 GGXVWGGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGRXVXSXGGXX 1264
GG WG G G G G G + G GGG GR G GG
Sbjct: 51 GGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGG--GNGGGGRGGGGGGGGGRGGGG 108
Query: 1263 AXQGGVXXXGXXAXXGRG 1210
+GG G G G
Sbjct: 109 GGRGGGGGGGGGRGGGGG 126
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 34.7 bits (76), Expect = 0.17
Identities = 24/83 (28%), Positives = 25/83 (30%), Gaps = 3/83 (3%)
Frame = +2
Query: 1214 RPXXAXXPXXXTPPCXAXXPPXLXTXRPXXXRPXXHGXGRPPPAPXKXXXPLRXPKXXXP 1393
RP A P A P + P P PAP P R P
Sbjct: 176 RPVPARPTPYIERPVPARPAPYIERPEPARPAPYIERPVPARPAPYIEPTPARPAPYIEP 235
Query: 1394 XXRPPXPXPXPPHTXP---PXTT 1453
P P P PP T P P TT
Sbjct: 236 STAKPQPRPQPPRTRPYVAPSTT 258
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.17
Identities = 33/126 (26%), Positives = 34/126 (26%), Gaps = 7/126 (5%)
Frame = +2
Query: 1085 PPPXLXTXPXXGXXXPXXXXXXGGXTXXXXXXXXXXXXGXNXPRPXXAXXPXXXT----- 1249
PPP + P G P G G P P P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 1250 PPCXAXXPPXLXTXRPXXX-RPXXHGXGRPPPAPX-KXXXPLRXPKXXXPXXRPPXPXPX 1423
PP PP P P G G PPP P K P R P P P P
Sbjct: 300 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP-PTGR 358
Query: 1424 PPHTXP 1441
PP P
Sbjct: 359 PPRGGP 364
Score = 33.5 bits (73), Expect = 0.39
Identities = 29/123 (23%), Positives = 32/123 (26%), Gaps = 2/123 (1%)
Frame = +3
Query: 1089 PPYXXPXPPAVXAXXXXPXXKGAXXXXXXPXXXXXPXAXTXXALRXPRAXXXXPPP--AX 1262
PP P PP P G+ P P T P PP +
Sbjct: 232 PPAGSPPPPP--PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 289
Query: 1263 PXXRXXXKXPGPTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPXXPTPXX 1442
P R P P P TG + PPP P P P P P
Sbjct: 290 PPPRAGSPPPPPPPRGSPPTG--SLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 347
Query: 1443 PTP 1451
P
Sbjct: 348 SPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.17
Identities = 33/126 (26%), Positives = 34/126 (26%), Gaps = 7/126 (5%)
Frame = +2
Query: 1085 PPPXLXTXPXXGXXXPXXXXXXGGXTXXXXXXXXXXXXGXNXPRPXXAXXPXXXT----- 1249
PPP + P G P G G P P P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 1250 PPCXAXXPPXLXTXRPXXX-RPXXHGXGRPPPAPX-KXXXPLRXPKXXXPXXRPPXPXPX 1423
PP PP P P G G PPP P K P R P P P P
Sbjct: 321 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP-PTGR 379
Query: 1424 PPHTXP 1441
PP P
Sbjct: 380 PPRGGP 385
Score = 33.5 bits (73), Expect = 0.39
Identities = 29/123 (23%), Positives = 32/123 (26%), Gaps = 2/123 (1%)
Frame = +3
Query: 1089 PPYXXPXPPAVXAXXXXPXXKGAXXXXXXPXXXXXPXAXTXXALRXPRAXXXXPPP--AX 1262
PP P PP P G+ P P T P PP +
Sbjct: 253 PPAGSPPPPP--PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 310
Query: 1263 PXXRXXXKXPGPTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPXXPTPXX 1442
P R P P P TG + PPP P P P P P
Sbjct: 311 PPPRAGSPPPPPPPRGSPPTG--SLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 368
Query: 1443 PTP 1451
P
Sbjct: 369 SPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.17
Identities = 33/126 (26%), Positives = 34/126 (26%), Gaps = 7/126 (5%)
Frame = +2
Query: 1085 PPPXLXTXPXXGXXXPXXXXXXGGXTXXXXXXXXXXXXGXNXPRPXXAXXPXXXT----- 1249
PPP + P G P G G P P P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 1250 PPCXAXXPPXLXTXRPXXX-RPXXHGXGRPPPAPX-KXXXPLRXPKXXXPXXRPPXPXPX 1423
PP PP P P G G PPP P K P R P P P P
Sbjct: 306 PPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP-PTGR 364
Query: 1424 PPHTXP 1441
PP P
Sbjct: 365 PPRGGP 370
Score = 33.5 bits (73), Expect = 0.39
Identities = 29/123 (23%), Positives = 32/123 (26%), Gaps = 2/123 (1%)
Frame = +3
Query: 1089 PPYXXPXPPAVXAXXXXPXXKGAXXXXXXPXXXXXPXAXTXXALRXPRAXXXXPPP--AX 1262
PP P PP P G+ P P T P PP +
Sbjct: 238 PPAGSPPPPP--PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP 295
Query: 1263 PXXRXXXKXPGPTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPXXPTPXX 1442
P R P P P TG + PPP P P P P P
Sbjct: 296 PPPRAGSPPPPPPPRGSPPTG--SLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG 353
Query: 1443 PTP 1451
P
Sbjct: 354 SPP 356
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.39
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +2
Query: 1334 PPPAPXKXXXPLRXPKXXXPXXRPPXPXPXPPHTXPP 1444
P PAP P P + P P P PPH PP
Sbjct: 108 PAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPP 144
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = +2
Query: 1211 PRPXXAXXPXXXTP-PCXAXXPPXLXTXRPXXXRPXXHGXGRPPPAPXKXXXPLRXPKXX 1387
P P A P P P P P P H PPPAP P+
Sbjct: 110 PAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPH-YPPPPPAPHSAYIDHSAPRPA 168
Query: 1388 XPXXRPPXPXPXPPHTXPP 1444
P P P P PP
Sbjct: 169 YIEHSAPPPQPQYPQQQPP 187
Score = 30.3 bits (65), Expect = 3.6
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +1
Query: 1318 PRXXAPXPRPXKXXXXPPXXXXXRAXXPPTXXTAPPXPHXXXXHHT 1455
P+ P P P + PP PP PP PH H+
Sbjct: 118 PQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHS 163
Score = 29.1 bits (62), Expect = 8.3
Identities = 26/105 (24%), Positives = 28/105 (26%), Gaps = 2/105 (1%)
Frame = +3
Query: 807 PASXAPPXXPXPXKXTPXXADPXPKXHPIPXCXDXPXXXEXPXXXXXAXXXXX-AKKPXS 983
P APP P P P A P P P P P A P
Sbjct: 45 PQQTAPPPPPAPY---PQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAP 101
Query: 984 XPQNHXXXXGPPXXSX-SXKXXXXXXXDXPPXXXXPPPYXXPXPP 1115
PQ+ PP P PPP+ P PP
Sbjct: 102 YPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPP 146
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 33.5 bits (73), Expect = 0.39
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = +3
Query: 1230 RAXXXXPPPAXPXXRXXXKXPGPTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXP 1394
+A PPP P + P P P P T PPP PS P P
Sbjct: 64 KATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTPSKSLKTPTP 118
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.51
Identities = 27/111 (24%), Positives = 28/111 (25%), Gaps = 2/111 (1%)
Frame = +3
Query: 1068 PPXXXXPPPYXXPXPPAVXAXXXXPXXKGAXXXXXXPXXXXXPXAXTXXALRXPRAXXXX 1247
PP P P PP P P P P
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP-GMGGM 333
Query: 1248 PPPAXPXXRXXXKXPGPTPHXPXXTGXG--AXPPPXQXXXXPSXXXXXPXP 1394
PPP P R P P P G G PPP + PS P P
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +2
Query: 1271 PPXLXTXRPXXXRPXXHGXGRPPPAPXKXXXPLRXPKXXXPXXRPPXPXPXPPHTXPP 1444
PP T P P RPPP P P P P R P P P PP
Sbjct: 266 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWP---PPPPPPPGRTPGPPGMPGMPPPP 320
Score = 29.5 bits (63), Expect = 6.3
Identities = 29/129 (22%), Positives = 32/129 (24%), Gaps = 2/129 (1%)
Frame = +3
Query: 1071 PXXXXPPPYXXPXPPAVX-AXXXXPXXKGAXXXXXXPXXXXXPXAXTXXALRXPRAXXXX 1247
P PPP P PP + P P P T P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG----PPGMPGM 316
Query: 1248 PPPAXPXXRXXXKXPG-PTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPX 1424
PPP P G P P P G PPP + P P + P
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 376
Query: 1425 XPTPXXPTP 1451
P P
Sbjct: 377 GHGMIPPPP 385
Score = 29.1 bits (62), Expect = 8.3
Identities = 23/84 (27%), Positives = 24/84 (28%), Gaps = 6/84 (7%)
Frame = +2
Query: 1211 PRPXXAXXPXXXTPPCXAXXPPXLXTXRPXXXRPXXHGX----GRPPPAPXKXXXPLRXP 1378
P P P PP P P P G G PPP P P P
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348
Query: 1379 KXXXPXXRPPXPX--PXPPHTXPP 1444
P P P PP + PP
Sbjct: 349 PPPPPRYPSAGPGMYPPPPPSRPP 372
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 33.1 bits (72), Expect = 0.51
Identities = 17/51 (33%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +2
Query: 1295 PXXXRPXXHGXGRPPPAPXKXXX--PLRXPKXXXPXXRPPXPXPXPPHTXP 1441
P + G PPP P + P R P P PP P PP T P
Sbjct: 126 PPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP 176
Score = 30.3 bits (65), Expect = 3.6
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +2
Query: 1295 PXXXRPXXHGXGRPPPAPXKXXXPLRXPKXXXPXXRPPXPXPXPPHTXPPXT 1450
P R G PPP P P P P RPP P P PP T
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRV-PRTPPPRSPPPRRPPMTPPSPQR-RPPRT 174
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.51
Identities = 27/111 (24%), Positives = 28/111 (25%), Gaps = 2/111 (1%)
Frame = +3
Query: 1068 PPXXXXPPPYXXPXPPAVXAXXXXPXXKGAXXXXXXPXXXXXPXAXTXXALRXPRAXXXX 1247
PP P P PP P P P P
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP-GMGGM 343
Query: 1248 PPPAXPXXRXXXKXPGPTPHXPXXTGXG--AXPPPXQXXXXPSXXXXXPXP 1394
PPP P R P P P G G PPP + PS P P
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
Score = 31.5 bits (68), Expect = 1.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +2
Query: 1271 PPXLXTXRPXXXRPXXHGXGRPPPAPXKXXXPLRXPKXXXPXXRPPXPXPXPPHTXPP 1444
PP T P P RPPP P P P P R P P P PP
Sbjct: 276 PPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWP---PPPPPPPGRTPGPPGMPGMPPPP 330
Score = 29.5 bits (63), Expect = 6.3
Identities = 29/129 (22%), Positives = 32/129 (24%), Gaps = 2/129 (1%)
Frame = +3
Query: 1071 PXXXXPPPYXXPXPPAVX-AXXXXPXXKGAXXXXXXPXXXXXPXAXTXXALRXPRAXXXX 1247
P PPP P PP + P P P T P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPG----PPGMPGM 326
Query: 1248 PPPAXPXXRXXXKXPG-PTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPX 1424
PPP P G P P P G PPP + P P + P
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPS 386
Query: 1425 XPTPXXPTP 1451
P P
Sbjct: 387 GHGMIPPPP 395
Score = 29.1 bits (62), Expect = 8.3
Identities = 23/84 (27%), Positives = 24/84 (28%), Gaps = 6/84 (7%)
Frame = +2
Query: 1211 PRPXXAXXPXXXTPPCXAXXPPXLXTXRPXXXRPXXHGX----GRPPPAPXKXXXPLRXP 1378
P P P PP P P P G G PPP P P P
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358
Query: 1379 KXXXPXXRPPXPX--PXPPHTXPP 1444
P P P PP + PP
Sbjct: 359 PPPPPRYPSAGPGMYPPPPPSRPP 382
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.90
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +3
Query: 1248 PPPAXPXXRXXXKXPGPTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPXX 1427
PPP P P P P TG G PPP P P P P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITG-GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 1428 PTP 1436
P P
Sbjct: 774 PPP 776
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 1290 PGPTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPXXPTPXXPTP 1451
P P P P TG G PPP P P P P P P P
Sbjct: 713 PPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.90
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +3
Query: 1248 PPPAXPXXRXXXKXPGPTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPXX 1427
PPP P P P P TG G PPP P P P P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITG-GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 1428 PTP 1436
P P
Sbjct: 774 PPP 776
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 1290 PGPTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPXXPTPXXPTP 1451
P P P P TG G PPP P P P P P P P
Sbjct: 713 PPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.90
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = +3
Query: 1248 PPPAXPXXRXXXKXPGPTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPXX 1427
PPP P P P P TG G PPP P P P P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITG-GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 1428 PTP 1436
P P
Sbjct: 357 PPP 359
Score = 29.9 bits (64), Expect = 4.8
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 1290 PGPTPHXPXXTGXGAXPPPXQXXXXPSXXXXXPXPXXAHXXHXPXXPTPXXPTP 1451
P P P P TG G PPP P P P P P P P
Sbjct: 296 PPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = -2
Query: 1428 GGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGRXVXSXGGXXAXQGG 1249
GG G G GG G G G G GGG G G G A GG
Sbjct: 129 GGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGG 188
Query: 1248 VXXXGXXAXXGRG 1210
G + G G
Sbjct: 189 GGCGGGGSSGGGG 201
Score = 29.1 bits (62), Expect = 8.3
Identities = 23/79 (29%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = -2
Query: 1443 GGXVWGGXGXGXG-GRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGRXVXSXGGX 1267
GG GG G G G G G G GG P P G G GG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG 94
Query: 1266 XAXQGGVXXXGXXAXXGRG 1210
GG G G G
Sbjct: 95 GGCGGGGGCGGGGGGCGGG 113
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/73 (30%), Positives = 23/73 (31%)
Frame = -2
Query: 1428 GGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGRXVXSXGGXXAXQGG 1249
GG G G GG G G G G GGG G G G A GG
Sbjct: 129 GGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGG 188
Query: 1248 VXXXGXXAXXGRG 1210
G + G G
Sbjct: 189 GGCGGGGSSGGGG 201
Score = 29.1 bits (62), Expect = 8.3
Identities = 23/79 (29%), Positives = 23/79 (29%), Gaps = 1/79 (1%)
Frame = -2
Query: 1443 GGXVWGGXGXGXG-GRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGRXVXSXGGX 1267
GG GG G G G G G G GG P P G G GG
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG 94
Query: 1266 XAXQGGVXXXGXXAXXGRG 1210
GG G G G
Sbjct: 95 GGCGGGGGCGGGGGGCGGG 113
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 31.1 bits (67), Expect = 2.1
Identities = 22/78 (28%), Positives = 22/78 (28%)
Frame = -2
Query: 1443 GGXVWGGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGRXVXSXGGXX 1264
GG WGG G GG G G G GGG W G G
Sbjct: 64 GGGDWGGNNGG-GGNWGGNGGGRGDWGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNND 122
Query: 1263 AXQGGVXXXGXXAXXGRG 1210
GG G G G
Sbjct: 123 GGWGGNNGGGGGGRGGGG 140
Score = 29.9 bits (64), Expect = 4.8
Identities = 21/76 (27%), Positives = 21/76 (27%), Gaps = 2/76 (2%)
Frame = -2
Query: 1431 WGGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPW--XXGRXXXGRXVXSXGGXXAX 1258
WGG G G G G G G GG W G GR GG
Sbjct: 88 WGGNGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRG 147
Query: 1257 QGGVXXXGXXAXXGRG 1210
G G G G
Sbjct: 148 PPGSNGGGDWGGNGGG 163
Score = 29.5 bits (63), Expect = 6.3
Identities = 23/74 (31%), Positives = 23/74 (31%)
Frame = -2
Query: 1431 WGGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGRXVXSXGGXXAXQG 1252
WGG G G G G G G GGGR G G GG G
Sbjct: 32 WGGWGGNRWGGGGGPGGWGNNGGGG--WGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWG 89
Query: 1251 GVXXXGXXAXXGRG 1210
G G GRG
Sbjct: 90 G-NGGGGRGGGGRG 102
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical protein
ZC518.2 protein.
Length = 984
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/70 (24%), Positives = 20/70 (28%)
Frame = +2
Query: 1235 PXXXTPPCXAXXPPXLXTXRPXXXRPXXHGXGRPPPAPXKXXXPLRXPKXXXPXXRPPXP 1414
P PP PP + + P P PAP P P + P
Sbjct: 126 PAVSRPPAFPTPPPSVGSAAPSIQPPIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAP 185
Query: 1415 XPXPPHTXPP 1444
P P PP
Sbjct: 186 RPQAPAAYPP 195
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical protein
T28C6.1 protein.
Length = 281
Score = 30.7 bits (66), Expect = 2.7
Identities = 24/65 (36%), Positives = 24/65 (36%)
Frame = -2
Query: 1443 GGXVWGGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGRXVXSXGGXX 1264
GG GG G GGR G G RG GAGG G G S GG
Sbjct: 53 GGGRGGGRGGSGGGRGGG---SGGGRGGSGGAGAGGSGSGSGGWGGQDGG---SSAGGWG 106
Query: 1263 AXQGG 1249
QGG
Sbjct: 107 GSQGG 111
Score = 29.1 bits (62), Expect = 8.3
Identities = 20/73 (27%), Positives = 22/73 (30%)
Frame = -2
Query: 1428 GGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGRXXXGRXVXSXGGXXAXQGG 1249
G G GG+ G G G GGGR G + S GG GG
Sbjct: 129 GSGQGGWGGQQGGNSNAGGWGGSQGGQNGGGGRGGSGGQGGWGGSQDGGSQGGWGGQNGG 188
Query: 1248 VXXXGXXAXXGRG 1210
GRG
Sbjct: 189 GQGGNQGGGGGRG 201
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +2
Query: 1334 PPPAPXKXXXPLRXPKXXXPXXRPPXPXPXPPHTXP 1441
PPP P + P P P PP P P PP P
Sbjct: 57 PPPCPAQFCPP---PPICPPPPPPPMPCPPPPPPMP 89
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical protein
F58G11.2 protein.
Length = 960
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -2
Query: 1443 GGXVWGGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGG 1333
GG V+G G G GG G G G F G+GGG
Sbjct: 826 GGGVFG--GGGRGGDFGGSGNFGGSGGGGSFGGSGGG 860
>U29096-1|AAA68406.1| 105|Caenorhabditis elegans Neuropeptide-like
protein protein32 protein.
Length = 105
Score = 29.9 bits (64), Expect = 4.8
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -2
Query: 1443 GGXVWGGXGXGXGGRXXGXXXXGXRRGXXXFXGAG 1339
GG +GG G G GGR G G RG F G G
Sbjct: 68 GGRGYGGRGGGWGGRGGGWGRGGGGRG---FYGGG 99
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.9 bits (64), Expect = 4.8
Identities = 31/129 (24%), Positives = 35/129 (27%), Gaps = 1/129 (0%)
Frame = -1
Query: 1450 GVGXXGVGXXGXWXXWAXXGXGXFXXXEGXXXFXXGGGXAPXPVXXGXXGVGPGXXQXXR 1271
G G G G G + G G G + GGG G G+G G
Sbjct: 120 GGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGG 179
Query: 1270 XXGXAGGGXXXXARGXRRAXXVXAXGSXXXXGXXXXXXAPXXXGXXXXAXTAG-GXGXQX 1094
G GGG G G G G + G G G
Sbjct: 180 DGGYGGGGFGGGGMGGYGG----GMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGP 235
Query: 1093 GGGXXXXGG 1067
GGG GG
Sbjct: 236 GGGYGMGGG 244
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical protein
C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 1337 PPAPXKXXXPLRXPKXXXPXXRPPXPXPXPPHTXP 1441
PP P + P P+ PP P P PP P
Sbjct: 467 PPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATP 501
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 29.1 bits (62), Expect = 8.3
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = +2
Query: 1334 PPPAPXKXXXPLRXPKXXX--PXXRPPXPXPXPPHTXPP 1444
PP P P R P P RPP P P PP PP
Sbjct: 243 PPGPPGPPGPPTRRPPGPPGPPTRRPPGP-PGPPTRRPP 280
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 8.3
Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = +2
Query: 1334 PPPAPXKXXXPLRXPKXXXPXXR--PPXPXPXPPHTXPP 1444
PPP P P+ P+ P PP P P PP PP
Sbjct: 40 PPPLPCPPP-PICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 8.3
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +2
Query: 1337 PPAPXKXXXPLRXPKXXXPXXRPPXPXPXPPHTXP 1441
PP P + P P+ PP P P PP P
Sbjct: 474 PPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATP 508
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.1 bits (62), Expect = 8.3
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = -2
Query: 1428 GGXGXGXGGRXXGXXXXGXRRGXXXFXGAGGGRPXPWXXGR-XXXGRXVXSXGGXXAXQG 1252
GG G G GG G G G G GGG G G + GG QG
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQG 114
Query: 1251 G 1249
G
Sbjct: 115 G 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,717,178
Number of Sequences: 27780
Number of extensions: 205175
Number of successful extensions: 1621
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1223
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4214704590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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