Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_L21
(1326 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 44 4e-05
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 43 8e-05
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.004
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 0.008
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.029
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.27
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.47
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.4
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 44.4 bits (100), Expect = 4e-05
Identities = 39/170 (22%), Positives = 46/170 (27%), Gaps = 9/170 (5%)
Frame = +1
Query: 541 PPPXPPXTXKRGXKXGXKXGPNPXXGGXPXPPXKGGXPXKXPXPQXXPKXPXPXKGGGKX 720
PPP PP + + K G + P PP + P P P P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 721 XKKKXPPPXXXKK---NXXXXXXXXXXXXXXXXPPXXPPXK--PPPXPPPXXXXXGXKKK 885
+ PPP + N PP + PP P P
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPS 430
Query: 886 XXXXXPPXXGXGG-XPPPXPP--XXGNPXXGXXP-PPPXXXGXXXPPPPP 1023
PP G PP PP P P PP PPP P
Sbjct: 431 LPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 38.7 bits (86), Expect = 0.002
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +2
Query: 824 PPXNPPXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXXGXGTPXXGXPPPPXPXGGX 1003
PP PP KK+ P PP G PP + PPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 1004 KXPPPPXG 1027
P PP G
Sbjct: 350 SIPLPPQG 357
Score = 28.7 bits (61), Expect = 1.9
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 6/73 (8%)
Frame = +2
Query: 812 PPXP-PPXNPPXPPPXXXXXXXXK-KKXXPXXPPXGXGGGXPPPTXXGXGT----PXXGX 973
PP P PP PP PP P PP PP G P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 974 PPPPXPXGGXKXP 1012
PPP P P
Sbjct: 475 APPPAPAPAPAAP 487
Score = 27.9 bits (59), Expect = 3.3
Identities = 24/95 (25%), Positives = 25/95 (26%), Gaps = 8/95 (8%)
Frame = +2
Query: 812 PPXPPPXN-----PPXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXXGXGTPXXGX- 973
PP PPP N PP PP P PPP+
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPP-----LPPPSSRVSAAALAANK 308
Query: 974 --PPPPXPXGGXKXPPPPXGXXXXXXEXKXXGXPP 1072
PPPP P PP G PP
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 43.2 bits (97), Expect = 8e-05
Identities = 26/64 (40%), Positives = 26/64 (40%)
Frame = +1
Query: 832 KPPPXPPPXXXXXGXKKKXXXXXPPXXGXGGXPPPXPPXXGNPXXGXXPPPPXXXGXXXP 1011
K PP PPP PP GG PPP PP G G PPPP P
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPP-PPPPG--VAGAGPPPP-------P 779
Query: 1012 PPPP 1023
PPPP
Sbjct: 780 PPPP 783
Score = 37.1 bits (82), Expect = 0.005
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 4/64 (6%)
Frame = +2
Query: 839 PXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXX----GXGTPXXGXPPPPXPXGGXK 1006
P PPP P PP GG PPP G G P PPP GG +
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSR 791
Query: 1007 XPPP 1018
P
Sbjct: 792 YYAP 795
Score = 32.3 bits (70), Expect = 0.15
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 928 PPPXPPXXGNPXXGXXP-----PPPXXXGXXXPPPPPG 1026
PPP PP P P P P G PPPPPG
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Score = 31.1 bits (67), Expect = 0.36
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 504 PPPXGXXGXXXXPPPXPPXNXKKGG 578
PPP G G PPP PP GG
Sbjct: 765 PPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 30.7 bits (66), Expect = 0.47
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Frame = +2
Query: 821 PPPXNPPXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXXGXGTPXXGXPPPPXPXGG 1000
P P P K P P P P P G PPPP P G
Sbjct: 710 PSPLLPDVSDTVEEQQKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Query: 1001 --XKXPPPP 1021
PPPP
Sbjct: 770 VAGAGPPPP 778
Score = 30.3 bits (65), Expect = 0.62
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 823 PPXKPPPXPPPXXXXXGXKKKXXXXXPPXXGXGGXPPPXPP 945
P P P PPP G PP G PPP PP
Sbjct: 744 PAPAPIPVPPPAPIMGG---PPPPPPPPGVAGAGPPPPPPP 781
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Frame = +1
Query: 541 PPPXPPXTXKRGXKXGX--KXGPNPXXGGXPXPPXKGGXPXKXPXPQXXPKXPXPXKGGG 714
PPP PP P P GG P PP G P P P P GG
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGP-PPPPPPPPAVSAGGS 790
Query: 715 K 717
+
Sbjct: 791 R 791
Score = 28.3 bits (60), Expect = 2.5
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 957 VPXPXXVGGGXPPPXPXGGXXG 892
VP P + GG PPP P G G
Sbjct: 751 VPPPAPIMGGPPPPPPPPGVAG 772
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 811 PPXXPPXKPPPXPPPXXXXXGXKKKXXXXXPPXXGXGGXPPPXPPXXGNP 960
PP P PP PPP G PP GG P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 999 PPXGXGGGGXPXXGVPXPXXVGGGXPPPXP 910
PP GG P P P G G PPP P
Sbjct: 753 PPAPIMGGPPPPP--PPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 7.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -1
Query: 1020 GGGGXXXPPXGXGGGGXPXXGVPXPXXVGGG 928
GG PP G G G P P P GG
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.5 bits (83), Expect = 0.004
Identities = 25/74 (33%), Positives = 26/74 (35%), Gaps = 4/74 (5%)
Frame = +2
Query: 812 PPXPPPXN--PPXPPPXXXXXXXXKKKXXPXXPPXGXGGGX--PPPTXXGXGTPXXGXPP 979
PP P P + PP P P P P G PP T TP G PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 980 PPXPXGGXKXPPPP 1021
P P K PP P
Sbjct: 1229 VPVPTA--KAPPVP 1240
Score = 35.5 bits (78), Expect = 0.017
Identities = 22/74 (29%), Positives = 23/74 (31%), Gaps = 4/74 (5%)
Frame = +2
Query: 812 PPXPPPX--NPPXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXXG--XGTPXXGXPP 979
PP P P PP P P P P P P+ P G PP
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 980 PPXPXGGXKXPPPP 1021
P P G PPP
Sbjct: 1181 VPKPAAGVPPVPPP 1194
Score = 34.3 bits (75), Expect = 0.038
Identities = 38/162 (23%), Positives = 38/162 (23%), Gaps = 1/162 (0%)
Frame = +1
Query: 541 PPPXPPXTXKRGXKXGXKXGPNPXXGGXPXPPXKGGXPXKXPXPQXXPKXPXPXKGGGKX 720
P P P K P P G P P P P P P P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 721 XKKKXPPPXXXKKNXXXXXXXXXXXXXXXXPPXXPPXKPPPXPPPXXXXXGXKKKXXXXX 900
PP P P PP PPP K
Sbjct: 1153 PAPSGAPPV---PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK------- 1202
Query: 901 PPXXGXGGXPPP-XPPXXGNPXXGXXPPPPXXXGXXXPPPPP 1023
P G PPP P P G PP P P P P
Sbjct: 1203 -PSVGVPPVPPPSTAPPVPTPSAG-LPPVPVPTAKAPPVPAP 1242
Score = 33.1 bits (72), Expect = 0.088
Identities = 25/91 (27%), Positives = 25/91 (27%), Gaps = 4/91 (4%)
Frame = +2
Query: 812 PPXPPPX--NPPXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXXGXGTPXXGXP--P 979
PP P P PP P P P P G PP G P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP--APSSGIPPVPKPAAGVPPVPPPSEA 1197
Query: 980 PPXPXGGXKXPPPPXGXXXXXXEXKXXGXPP 1072
PP P PP P G PP
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 31.1 bits (67), Expect = 0.36
Identities = 19/71 (26%), Positives = 19/71 (26%)
Frame = +1
Query: 811 PPXXPPXKPPPXPPPXXXXXGXKKKXXXXXPPXXGXGGXPPPXPPXXGNPXXGXXPPPPX 990
PP P PP P P K P G P P P P PP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 991 XXGXXXPPPPP 1023
PP P
Sbjct: 1143 PKPSVAAPPVP 1153
Score = 29.9 bits (64), Expect = 0.82
Identities = 21/92 (22%), Positives = 21/92 (22%), Gaps = 2/92 (2%)
Frame = +2
Query: 812 PPXPPPX--NPPXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXXGXGTPXXGXPPPP 985
PP P P PP P P P P P P PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 986 XPXGGXKXPPPPXGXXXXXXEXKXXGXPPXXK 1081
P P P G PP K
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Score = 29.1 bits (62), Expect = 1.4
Identities = 26/96 (27%), Positives = 27/96 (28%), Gaps = 6/96 (6%)
Frame = +2
Query: 812 PPXPPPXN-PPXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXXGX-GTPXX----GX 973
PP P P PP P P P PP P+ G P G
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 974 PPPPXPXGGXKXPPPPXGXXXXXXEXKXXGXPPXXK 1081
PP P P PP P G PP K
Sbjct: 1092 PPVPKP--SVAAPPVPKPSVAVPPVPAPSGAPPVPK 1125
Score = 27.1 bits (57), Expect = 5.8
Identities = 17/67 (25%), Positives = 18/67 (26%), Gaps = 2/67 (2%)
Frame = +2
Query: 824 PPXNPPXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXXGXGT--PXXGXPPPPXPXG 997
P PP P P P P P P+ P PP P P G
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 998 GXKXPPP 1018
P P
Sbjct: 1120 APPVPKP 1126
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.5 bits (63), Expect(2) = 0.008
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 919 GGXPPPXPPXXGNPXXGXXPPPP 987
G PPP PP P PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPP 29
Score = 28.3 bits (60), Expect = 2.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 923 GXPPPTXXGXGTPXXGXPPPPXPXGGXK 1006
G PPP G PPPP P G K
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPGYVK 34
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 811 PPXXPPXKPPPXPPPXXXXXGXKKKXXXXXPPXXG 915
PP PP PP PP G KK P G
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSG 45
Score = 27.5 bits (58), Expect = 4.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 504 PPPXGXXGXXXXPPPXPPXNXKK 572
PPP G PPP PP KK
Sbjct: 13 PPPPGFEPPSQPPPPPPPGYVKK 35
Score = 27.1 bits (57), Expect = 5.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 940 PPXXGNPXXGXXPPPPXXXGXXXPPPPPG 1026
PP GNP PP PPPPPG
Sbjct: 5 PP--GNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 7.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 527 PPXPXGGGGFFXGXXXPPPPPXG 459
PP P GF PPPPP G
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPG 31
Score = 25.8 bits (54), Expect(2) = 0.008
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +1
Query: 823 PPXKPPPXPPP 855
PP PPP PPP
Sbjct: 5 PPGNPPPPPPP 15
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 34.7 bits (76), Expect = 0.029
Identities = 26/70 (37%), Positives = 26/70 (37%)
Frame = -1
Query: 1020 GGGGXXXPPXGXGGGGXPXXGVPXPXXVGGGXPPPXPXGGXXGXXFFFXXXXXXXXGGGX 841
GGG PP G GG G G G P G G F GGG
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF--GGGPGGFGGGL 251
Query: 840 GGFXGGGXGG 811
GGF GGG GG
Sbjct: 252 GGF-GGGPGG 260
Score = 33.5 bits (73), Expect = 0.067
Identities = 26/74 (35%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
Frame = -2
Query: 1022 GGGGGXXXPXXXGGGGXXPXXG-FPXXGGXGGGXPPXPXXGGXXXXFFFFXPXXXXXGGG 846
G GG G GG P G F GG GG GG F GGG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 845 XG--GGFXGGXXGG 810
G GG GG GG
Sbjct: 244 PGGFGGGLGGFGGG 257
Score = 33.5 bits (73), Expect = 0.067
Identities = 29/75 (38%), Positives = 29/75 (38%), Gaps = 6/75 (8%)
Frame = -1
Query: 1017 GGGXXXPPXGXGG-GGXPXXGVPXPXXVG----GGXPPPXPXG-GXXGXXFFFXXXXXXX 856
GGG PP G GG GG G G GG P G G G
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGG 253
Query: 855 XGGGXGGFXGGGXGG 811
GGG GGF GGG GG
Sbjct: 254 FGGGPGGF-GGGPGG 267
Score = 30.3 bits (65), Expect = 0.62
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 557 GGXGGGXXXXPPXPXGGGGF 498
GG GGG PP P G GGF
Sbjct: 191 GGFGGGSGGPPPGPGGFGGF 210
Score = 27.1 bits (57), Expect = 5.8
Identities = 28/80 (35%), Positives = 28/80 (35%), Gaps = 1/80 (1%)
Frame = -2
Query: 713 PPPFXGXGXXGXXWGXGFFXGXPPFXGGXGXPPXXGFGPX-FXPXXXPLFXVXGGXGGGX 537
PPP G G G G G F G GG G G GP F GG GGG
Sbjct: 200 PPP--GPGGFG---GFGGFGGEGHHHGGHGG---FGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 536 XXXPPXPXGGGGFFXGXXXP 477
P G GG G P
Sbjct: 252 GGFGGGPGGFGGGPGGHGGP 271
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 31.5 bits (68), Expect = 0.27
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 876 KKKKXXPXPPXXGXGGXXPPXPXXXGEPXXGXXPPPPXXXGXXXTPPPP 1022
K + P PP G P P EP PPP PPPP
Sbjct: 215 KPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 31.1 bits (67), Expect = 0.36
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 894 PXPPXXGXGGXXPPXPXXXGEPXXGXXPPPPXXXGXXXTPPPP 1022
P PP G P P EP PPP PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 31.1 bits (67), Expect = 0.36
Identities = 27/100 (27%), Positives = 27/100 (27%), Gaps = 4/100 (4%)
Frame = +1
Query: 736 PPPXXXKKNXXXXXXXXXXXXXXXXPPXXPPXKPPPX----PPPXXXXXGXKKKXXXXXP 903
PPP K PP PP P PPP G P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHMPP----P 262
Query: 904 PXXGXGGXPPPXPPXXGNPXXGXXPPPPXXXGXXXPPPPP 1023
P G P PP P PPP PPPP
Sbjct: 263 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 31.1 bits (67), Expect = 0.36
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 894 PXPPXXGXGGXXPPXPXXXGEPXXGXXPPPPXXXGXXXTPPPP 1022
P PP G P P EP PPP PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 31.1 bits (67), Expect = 0.36
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 894 PXPPXXGXGGXXPPXPXXXGEPXXGXXPPPPXXXGXXXTPPPP 1022
P PP G P P EP PPP PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 31.1 bits (67), Expect = 0.36
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 894 PXPPXXGXGGXXPPXPXXXGEPXXGXXPPPPXXXGXXXTPPPP 1022
P PP G P P EP PPP PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 31.1 bits (67), Expect = 0.36
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 894 PXPPXXGXGGXXPPXPXXXGEPXXGXXPPPPXXXGXXXTPPPP 1022
P PP G P P EP PPP PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 31.1 bits (67), Expect = 0.36
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 894 PXPPXXGXGGXXPPXPXXXGEPXXGXXPPPPXXXGXXXTPPPP 1022
P PP G P P EP PPP PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 31.1 bits (67), Expect = 0.36
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 894 PXPPXXGXGGXXPPXPXXXGEPXXGXXPPPPXXXGXXXTPPPP 1022
P PP G P P EP PPP PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 29.9 bits (64), Expect = 0.82
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +1
Query: 811 PPXXPPXKPPPXPPPXXXXXGXKKKXXXXXPPXXGXGGXPPPXPPXXGNPXXGXXPPPPX 990
P P + P PPP G PP G P PP P PPP
Sbjct: 198 PAHHEPGEHMP-PPPMHHKPGEHMPP----PPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 252
Query: 991 XXGXXXPPPPP 1023
PPPP
Sbjct: 253 HEPGEHMPPPP 263
Score = 29.9 bits (64), Expect = 0.82
Identities = 20/71 (28%), Positives = 21/71 (29%)
Frame = +1
Query: 811 PPXXPPXKPPPXPPPXXXXXGXKKKXXXXXPPXXGXGGXPPPXPPXXGNPXXGXXPPPPX 990
PP KP PP + PP G P PP P PPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHH--EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 265
Query: 991 XXGXXXPPPPP 1023
PPPP
Sbjct: 266 HEPGEHMPPPP 276
Score = 29.9 bits (64), Expect = 0.82
Identities = 27/107 (25%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Frame = +1
Query: 715 KXXKKKXPPPXXXKKNXXXXXXXXXXXXXXXXPPXXPPXKPPPX----PPPXXXXXGXKK 882
K + PPP + PP PP P PPP G
Sbjct: 215 KPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP--PPMHHEPGEHMPPPPMHHEPGEHM 272
Query: 883 KXXXXXPPXXGXGGXPPPXPPXXGNPXXGXXPPPPXXXGXXXPPPPP 1023
PP G P PP P PPP PPPP
Sbjct: 273 PP----PPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +1
Query: 811 PPXXPPXKPPPXPPPXXXXXGXKKKXXXXXPPXXGXGGXPPPXPPXXGNPXXGXXPPPPX 990
P P + P PPP G PP G P PP P PPP
Sbjct: 263 PMHHEPGEHMP-PPPMHHEPGEHMPP----PPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 317
Query: 991 XXGXXXPPPPP 1023
PPPP
Sbjct: 318 HEPGEHMPPPP 328
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/71 (29%), Positives = 22/71 (30%)
Frame = +1
Query: 811 PPXXPPXKPPPXPPPXXXXXGXKKKXXXXXPPXXGXGGXPPPXPPXXGNPXXGXXPPPPX 990
P P + P PPP G PP G P PP P PPP
Sbjct: 276 PMHHEPGEHMP-PPPMHHEPGEHMPP----PPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 330
Query: 991 XXGXXXPPPPP 1023
PPPP
Sbjct: 331 HEPGEHMPPPP 341
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 30.7 bits (66), Expect = 0.47
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +2
Query: 812 PPXPPPXNPPXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXXGXGTPXXGXPPPPXP 991
PP P P PPP K P P P PP P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 992 XGGXKXPPPP 1021
K PPPP
Sbjct: 199 ---PKVPPPP 205
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +2
Query: 824 PPXNPPXPPPXXXXXXXXKKKXXPXXPPXGXGGGXPPPTXXGXGTPXXGXPPPPXPXGGX 1003
PP P P P P PP P P+ P PPP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPS-KAPPIP-SSLPPPAQPAAPV 181
Query: 1004 KXPP 1015
K PP
Sbjct: 182 KSPP 185
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/67 (26%), Positives = 19/67 (28%)
Frame = +1
Query: 826 PXKPPPXPPPXXXXXGXKKKXXXXXPPXXGXGGXPPPXPPXXGNPXXGXXPPPPXXXGXX 1005
P P PP + PP PP PP P PPPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSA--PPPPLPASSA 1740
Query: 1006 XPPPPPG 1026
P PG
Sbjct: 1741 PSVPNPG 1747
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 4.4
Identities = 14/55 (25%), Positives = 16/55 (29%)
Frame = +1
Query: 823 PPXKPPPXPPPXXXXXGXKKKXXXXXPPXXGXGGXPPPXPPXXGNPXXGXXPPPP 987
PP PPP P + PP P +P PPPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPP 243
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 5.8
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 853 GGGXGGVXGGGXGG 812
GGG GG GGG GG
Sbjct: 29 GGGRGGARGGGRGG 42
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.306 0.147 0.491
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,958,695
Number of Sequences: 5004
Number of extensions: 56459
Number of successful extensions: 399
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 727307148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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