Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L15
         (1281 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    61   7e-08
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    57   9e-07
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    51   7e-05
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ...    46   0.002
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE...    40   0.10 
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h...    40   0.18 
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    36   3.0  

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 60.9 bits (141), Expect = 7e-08
 Identities = 30/49 (61%), Positives = 30/49 (61%)
 Frame = +2

Query: 566 RXXIGSXPLTXIXKIDXXVGGGXXRXXYXXTXRXPLEXPSCALLXXPCR 712
           R  IGS PLT I KID  V GG  R  Y  T R PLE PSCALL  PCR
Sbjct: 15  RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCR 63



 Score = 48.8 bits (111), Expect = 3e-04
 Identities = 23/42 (54%), Positives = 23/42 (54%)
 Frame = +3

Query: 669 PWXPPRALXCXXPAVLXDTCPPFSLREGWRFXIPXAVXISXR 794
           P   P       P  L DTCPPFSLRE WRF I  AV IS R
Sbjct: 49  PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVR 90


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 57.2 bits (132), Expect = 9e-07
 Identities = 40/108 (37%), Positives = 45/108 (41%)
 Frame = +2

Query: 383 GXLPLPXSMXRCPXSXGCGQRXXLPQXR*YGXPQNRGXXXEXXCHQXASXRPXTVXRPGC 562
           G +PLP S+ R   S GCG+R        Y      G   E      +        RP  
Sbjct: 34  GDIPLPRSLTRYARSFGCGER--------YRLTDGDGNFLEDTRKTLSKEE----IRPRR 81

Query: 563 WRXXIGSXPLTXIXKIDXXVGGGXXRXXYXXTXRXPLEXPSCALLXXP 706
            R  IGS PLT I K D  + GG  R  Y    R PL  PSCALL  P
Sbjct: 82  SRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 50.8 bits (116), Expect = 7e-05
 Identities = 25/47 (53%), Positives = 26/47 (55%)
 Frame = +2

Query: 566 RXXIGSXPLTXIXKIDXXVGGGXXRXXYXXTXRXPLEXPSCALLXXP 706
           R  IGS PLT I K D  + GG  R  Y  T R PL  PSCALL  P
Sbjct: 51  RFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides capillosus ATCC 29799|Rep: Putative
           uncharacterized protein - Bacteroides capillosus ATCC
           29799
          Length = 37

 Score = 46.0 bits (104), Expect = 0.002
 Identities = 21/27 (77%), Positives = 22/27 (81%)
 Frame = +2

Query: 716 TGYLSAXLPSGRVALXHTSRCXYLXSV 796
           TGYLSA LPSG VAL H+SRC YL SV
Sbjct: 11  TGYLSAFLPSGSVALSHSSRCRYLSSV 37


>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
           Myxococcus xanthus
          Length = 486

 Score = 40.3 bits (90), Expect = 0.10
 Identities = 24/54 (44%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +2

Query: 335 CINESATPRGEAXGVXGXLPLPXSMXRCPXSXGCGQRXXL-PQXR*YGXPQNRG 493
           CI + AT R EA  V   LPL  S  RC  S GCG         R YG PQ +G
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319


>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
           Alpha-hemolysin - Aeromonas hydrophila
          Length = 59

 Score = 39.5 bits (88), Expect = 0.18
 Identities = 22/30 (73%), Positives = 22/30 (73%)
 Frame = +1

Query: 415 LPSVVRLRPAXSPPSXAVIRXSTESGDXAG 504
           L SVVRLR A S  S AVIR STESGD AG
Sbjct: 27  LRSVVRLRRAVSAHSKAVIRLSTESGDNAG 56


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 35.5 bits (78), Expect = 3.0
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -1

Query: 843 ERGXXXHSPAXSEGXTTXLRYXQREV*XSATLPEGRXADRYPVKRQGXXXRAHEG 679
           ERG   +SPA SE               +   P+G+ A++   KRQG   RAHEG
Sbjct: 25  ERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEG 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,822,017
Number of Sequences: 1657284
Number of extensions: 6421708
Number of successful extensions: 6918
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 6607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6909
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 130794573157
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)