Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_L14
(1278 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 203 9e-51
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 107 5e-22
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 89 3e-16
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 73 2e-11
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 66 2e-09
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 59 2e-07
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 57 1e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 54 8e-06
UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2... 40 0.14
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 40 0.14
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 40 0.18
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 203 bits (495), Expect = 9e-51
Identities = 96/118 (81%), Positives = 98/118 (83%)
Frame = +2
Query: 557 SKRPXTVKRPXCWXFSIGSAPLTSITKIDAQVRGGKTRQDYKDTRRFPLEAPSCALLFRP 736
SK+ T FSIGSAPLTSITKIDAQVRGG+TRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 737 CRLPDTCPPFSLREAWGFLIAHAVGISVRCRSXAPSWXGCTNPPXSPTGGXYXVXIVL 910
CRLPDTCPPFSLREAW FLIAHAVGISVRCRS APSW CTNPP SPT Y V IVL
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVL 119
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 107 bits (258), Expect = 5e-22
Identities = 65/112 (58%), Positives = 70/112 (62%)
Frame = +2
Query: 413 GALPXPRSLTRCARSFGXGERXQLTQXX*YGYPXNQGITQEXTCEQKASKRPXTVKRPXC 592
G +P PRSLTR ARSFG GER +LT G E T + SK RP
Sbjct: 34 GDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEEI---RPRR 81
Query: 593 WXFSIGSAPLTSITKIDAQVRGGKTRQDYKDTRRFPLEAPSCALLFRPCRLP 748
FSIGSAPLTSI K DAQ+ GG+TRQDYKD RRFPL APSCALLF P LP
Sbjct: 82 SRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 88.6 bits (210), Expect = 3e-16
Identities = 42/54 (77%), Positives = 45/54 (83%)
Frame = +2
Query: 575 VKRPXCWXFSIGSAPLTSITKIDAQVRGGKTRQDYKDTRRFPLEAPSCALLFRP 736
V+ P FSIGSAPLTSITK DAQ+ GG+TRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 72.5 bits (170), Expect = 2e-11
Identities = 33/37 (89%), Positives = 34/37 (91%)
Frame = +1
Query: 715 VRSPVPTLPFTGYLSAFLPSGSVGLSHSSRCRYLSXV 825
+RSPVPTLP TGYLSAFLPSGSV LSHSSRCRYLS V
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 65.7 bits (153), Expect = 2e-09
Identities = 35/71 (49%), Positives = 42/71 (59%)
Frame = -3
Query: 910 QXDXYXIXXTXRAXRGVXAPXPAWSXRPTPX*DTYSVSYEKAPRFPKGERRTGIR*TAGS 731
Q D Y + RA RGV A PAWS RP P DT SVSYEKAPRFPKG++ + +G
Sbjct: 12 QDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV---SGK 68
Query: 730 EQESARGSFQG 698
Q R + +G
Sbjct: 69 RQGRNRRAHEG 79
Score = 50.4 bits (115), Expect = 1e-04
Identities = 26/48 (54%), Positives = 30/48 (62%)
Frame = -1
Query: 792 RKPHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL*SCRVLPPLT 649
+ P + +K QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 52 KAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 59.3 bits (137), Expect = 2e-07
Identities = 35/87 (40%), Positives = 39/87 (44%)
Frame = +2
Query: 650 VRGGKTRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWGFLIAHAVGISVRCR 829
VR G+TRQD K P P PPFSL + + GIS RCR
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 830 SXAPSWXGCTNPPXSPTGGXYXVXIVL 910
S APSW NPP SPT Y V + L
Sbjct: 83 SFAPSWAVSKNPPFSPTAAPYPVTVHL 109
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 56.8 bits (131), Expect = 1e-06
Identities = 29/36 (80%), Positives = 29/36 (80%)
Frame = +1
Query: 433 LTDSLRXVVRXXRAVSAHSXXVIRLSTXSGDNAGXN 540
LTDSLR VVR RAVSAHS VIRLST SGDNAG N
Sbjct: 23 LTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKN 58
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 54.0 bits (124), Expect = 8e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +2
Query: 506 YPXNQGITQEXTCEQKASKRPXTVKRPXCWXFSIGSAPLTSITKIDAQVRGGKTRQDYKD 685
+P N I + + + + P T F S PLT+ITKI Q + +T+ +YK
Sbjct: 38 HPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKY 97
Query: 686 TRRFPLEAPSCALLFRP 736
T FPL++PS +LLF P
Sbjct: 98 TTPFPLQSPSYSLLFPP 114
>UniRef50_P03846 Cluster: Putative uncharacterized protein 1; n=2;
cellular organisms|Rep: Putative uncharacterized protein
1 - Escherichia coli
Length = 47
Score = 39.9 bits (89), Expect = 0.14
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = -3
Query: 910 QXDXYXIXXTXRAXRGVXAPXPAWSXRPTPX*DT 809
Q + Y I + RA RGV A PAWS RPTP DT
Sbjct: 12 QVNSYRIRRSSRAERGVLAYSPAWSERPTPSRDT 45
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 39.9 bits (89), Expect = 0.14
Identities = 18/30 (60%), Positives = 19/30 (63%)
Frame = -3
Query: 910 QXDXYXIXXTXRAXRGVXAPXPAWSXRPTP 821
Q D Y I + RA RGV A PAWS RPTP
Sbjct: 12 QDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 39.5 bits (88), Expect = 0.18
Identities = 24/57 (42%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 365 CXNESANARGXAVXXXGALPXPRSLTRCARSFGXGERXQL-TQXX*YGYPXNQGITQ 532
C + A AR AV ALP RS TRC RS G G + YG P QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 722,867,308
Number of Sequences: 1657284
Number of extensions: 11992600
Number of successful extensions: 27849
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 26696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27819
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 130389636398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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