Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L14
         (1278 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903     31   1.9  
06_03_0218 + 18219956-18220555                                         30   4.5  

>04_03_0196 - 12533947-12534470,12536577-12537039,12537673-12537903
          Length = 405

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = -1

Query: 792 RKPHASRREKGGQVSGKRQGRNRRAHEGASRGK 694
           R+PH SRRE+ G  S  + G ++ A+   S+ K
Sbjct: 128 RQPHRSRRERDGNGSDGKSGSSQAANRNVSKDK 160


>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 21/63 (33%), Positives = 27/63 (42%)
 Frame = -1

Query: 870 NGGXVHPXQLGAXDLHRTEIPTA*AMRKPHASRREKGGQVSGKRQGRNRRAHEGASRGKR 691
           NGG     ++ A    +T  P     R+    R E  G  + KR+GR R    G  RGKR
Sbjct: 81  NGGLTEGEEVAARPREKTARPDGARARRER--RLEAAG--AEKREGRRRGGSSGGLRGKR 136

Query: 690 LVS 682
             S
Sbjct: 137 RAS 139


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,556,253
Number of Sequences: 37544
Number of extensions: 372514
Number of successful extensions: 981
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)