Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L13
         (1328 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0479 + 3606663-3607448                                           31   2.7  
02_05_0686 - 30900748-30902167,30903442-30904742                       30   4.7  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    29   6.2  
03_01_0515 - 3864796-3865425                                           29   6.2  

>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
 Frame = +3

Query: 717 FPKXPPPXEXXKXSTPXXKGXXPQXRXXXXXFPXXXPPGXXX-KKTPPXXXGXXPPXPXK 893
           FP  PPP        P   G  PQ R      P   PPG       PP   G  PP P  
Sbjct: 197 FPGGPPPPPGPFMRGPPPMGP-PQVRPG---MPGGPPPGMRPGMPPPPFRPGMPPPPPGP 252

Query: 894 KXGGXXP 914
           +  G  P
Sbjct: 253 QQPGQNP 259



 Score = 29.1 bits (62), Expect = 8.3
 Identities = 19/69 (27%), Positives = 20/69 (28%)
 Frame = +3

Query: 732 PPXEXXKXSTPXXKGXXPQXRXXXXXFPXXXPPGXXXKKTPPXXXGXXPPXPXKKXGGXX 911
           PP    +   P      P  R      P   PPG      PP   G  PP P     G  
Sbjct: 159 PPVAYPQVVRPPPGQMPPPMRPPQMPIPFQRPPG-----VPPAFPGGPPPPPGPFMRGPP 213

Query: 912 PKXTPXXXP 938
           P   P   P
Sbjct: 214 PMGPPQVRP 222


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 16/57 (28%), Positives = 17/57 (29%)
 Frame = +3

Query: 825 PPGXXXKKTPPXXXGXXPPXPXKKXGGXXPKXTPXXXPXXEKXXXXKKXGXXXKPPR 995
           PP    K  PP      PP P    G   P       P        KK G    PP+
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPK 383



 Score = 29.1 bits (62), Expect = 8.3
 Identities = 16/50 (32%), Positives = 16/50 (32%)
 Frame = +2

Query: 824 PPRXXXKKNPPXXXXXGPPXPX*KXGXXXPKXHPPKXPPXGKXXXXKKXG 973
           PP    K  PP     GPP P    G   P   PP     G      K G
Sbjct: 336 PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
 Frame = -3

Query: 630  LGGTXXPPXFGXWPXXXSGRXXXPPPPXGEXXGAP----KXXXLXPXVXPFXFSGKNXPP 463
            +GG   PP     P    G    PPPP G   G P          P   P    G   PP
Sbjct: 1145 IGGVPPPP-----PVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPP 1199

Query: 462  LPP 454
             PP
Sbjct: 1200 TPP 1202


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 15/46 (32%), Positives = 17/46 (36%)
 Frame = -3

Query: 591 PXXXSGRXXXPPPPXGEXXGAPKXXXLXPXVXPFXFSGKNXPPLPP 454
           P   +G    PPPP      +P    L P   P   S    PP PP
Sbjct: 62  PPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPP 107


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,163,292
Number of Sequences: 37544
Number of extensions: 379703
Number of successful extensions: 556
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 502
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4166995416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)