Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L12
         (1317 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   0.95 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   1.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   1.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   1.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   1.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    24   2.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   2.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   2.9  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   6.7  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 25.4 bits (53), Expect = 0.95
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +3

Query: 525 TNIWHEHSRFQQSE 566
           T+ WH HS FQ+S+
Sbjct: 174 THFWHSHSGFQRSD 187


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 444 FWNNWLWDEHIWDWFIW 494
           F N+++  +H W W +W
Sbjct: 454 FLNDFISHQHAWIWLLW 470


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 444 FWNNWLWDEHIWDWFIW 494
           F N+++  +H W W +W
Sbjct: 454 FLNDFISHQHAWIWLLW 470


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 444 FWNNWLWDEHIWDWFIW 494
           F N+++  +H W W +W
Sbjct: 454 FLNDFISHQHAWIWLLW 470


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +3

Query: 444 FWNNWLWDEHIWDWFIW 494
           F N+++  +H W W +W
Sbjct: 454 FLNDFISHQHAWIWLLW 470


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 444 FWNNWLWDEHIWDWFIWNWIQYICECSTNIW 536
           F  ++L  +H W W +W   Q     S +IW
Sbjct: 208 FLQDFLSHQHAWIWLVWLLSQ--AWISVHIW 236


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 444 FWNNWLWDEHIWDWFIWNWIQYICECSTNIW 536
           F  ++L  +H W W +W   Q     S +IW
Sbjct: 441 FLQDFLSHQHAWIWLVWLLSQ--AWISVHIW 469


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +3

Query: 444 FWNNWLWDEHIWDWFIWNWIQYICECSTNIW 536
           F  ++L  +H W W +W   Q     S +IW
Sbjct: 441 FLQDFLSHQHAWIWLVWLLSQ--AWISVHIW 469


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -1

Query: 798 PLC*NLIPFVAEHTAVEHGRD*RLVGCRWR 709
           PLC  L     E     H  D R++GC  R
Sbjct: 239 PLCERLFEASREEYVTRHLIDGRIIGCDQR 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,084
Number of Sequences: 336
Number of extensions: 3954
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 38946419
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)