Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L12
         (1317 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70284-13|CAB54280.1|  639|Caenorhabditis elegans Hypothetical p...    37   0.028
Z70284-12|CAB54278.1|  549|Caenorhabditis elegans Hypothetical p...    37   0.028
Z70284-11|CAA94281.1|  612|Caenorhabditis elegans Hypothetical p...    37   0.028

>Z70284-13|CAB54280.1|  639|Caenorhabditis elegans Hypothetical
           protein K07F5.13c protein.
          Length = 639

 Score = 37.1 bits (82), Expect = 0.028
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +1

Query: 724 HEALVAAVFNCCVFGDERDQVLAKWNLIQAQWGTGQAYYXRNHPPLTLTXQ-NPXCRFKA 900
           +   V AV +  +FG++ D V+AK N + A  G G+A Y   +  L+ + + N   RF  
Sbjct: 255 YHPFVKAVGDPKLFGNDNDGVVAKLNQVAAGLGVGKAPYKDGNQLLSFSMEGNLFERFVG 314

Query: 901 XGYSXLCXKEXKDGHV 948
            GY+ +  +   +G V
Sbjct: 315 IGYNRISERTDDEGFV 330


>Z70284-12|CAB54278.1|  549|Caenorhabditis elegans Hypothetical
           protein K07F5.13b protein.
          Length = 549

 Score = 37.1 bits (82), Expect = 0.028
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +1

Query: 724 HEALVAAVFNCCVFGDERDQVLAKWNLIQAQWGTGQAYYXRNHPPLTLTXQ-NPXCRFKA 900
           +   V AV +  +FG++ D V+AK N + A  G G+A Y   +  L+ + + N   RF  
Sbjct: 165 YHPFVKAVGDPKLFGNDNDGVVAKLNQVAAGLGVGKAPYKDGNQLLSFSMEGNLFERFVG 224

Query: 901 XGYSXLCXKEXKDGHV 948
            GY+ +  +   +G V
Sbjct: 225 IGYNRISERTDDEGFV 240


>Z70284-11|CAA94281.1|  612|Caenorhabditis elegans Hypothetical
           protein K07F5.13a protein.
          Length = 612

 Score = 37.1 bits (82), Expect = 0.028
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
 Frame = +1

Query: 724 HEALVAAVFNCCVFGDERDQVLAKWNLIQAQWGTGQAYYXRNHPPLTLTXQ-NPXCRFKA 900
           +   V AV +  +FG++ D V+AK N + A  G G+A Y   +  L+ + + N   RF  
Sbjct: 228 YHPFVKAVGDPKLFGNDNDGVVAKLNQVAAGLGVGKAPYKDGNQLLSFSMEGNLFERFVG 287

Query: 901 XGYSXLCXKEXKDGHV 948
            GY+ +  +   +G V
Sbjct: 288 IGYNRISERTDDEGFV 303


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,162,440
Number of Sequences: 27780
Number of extensions: 334742
Number of successful extensions: 697
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3683964012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)