Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_L09
(1347 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0417 - 25052305-25052398,25052583-25052672,25052740-250529... 184 1e-46
07_03_0920 - 22603868-22603964,22604110-22604222,22604281-226044... 183 2e-46
04_04_1134 + 31137326-31137337,31137964-31138004,31138089-311381... 183 2e-46
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 176 3e-44
04_04_1135 + 31140032-31140043,31140552-31140592,31140680-311407... 171 1e-42
07_03_0919 - 22594980-22595111,22595398-22595427,22595522-225955... 128 7e-30
08_02_0383 - 16539472-16539633,16543044-16543205 44 2e-04
04_04_1693 + 35404336-35404515,35405732-35406019,35406189-354062... 37 0.042
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 32 1.2
02_05_0389 + 28551649-28551903,28552328-28552402,28552482-285526... 30 4.8
08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213... 29 8.4
>04_04_0417 -
25052305-25052398,25052583-25052672,25052740-25052905,
25053547-25053647,25053735-25053775,25054170-25054181
Length = 167
Score = 184 bits (448), Expect = 1e-46
Identities = 95/151 (62%), Positives = 109/151 (72%), Gaps = 12/151 (7%)
Frame = +2
Query: 59 MADQTEKAFQKQATVFLNRKGGMKXKDM-----RHHKNVGLGFKTPREAIEGTYIDKKCP 223
MA+QTE+AF KQ VFL K K K R KN+GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTERAFLKQPKVFLCPKKTTKGKKPGKGGNRFWKNIGLGFKTPREAIEGTYIDKKCP 60
Query: 224 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR-------FEKRHRNMSVHLS 382
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R +EKRH N+ H+S
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNLVAGYEKRHSNIPAHIS 120
Query: 383 PCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 475
PCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 PCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 150
>07_03_0920 -
22603868-22603964,22604110-22604222,22604281-22604429,
22604732-22604832,22604917-22604957,22605584-22605595
Length = 170
Score = 183 bits (446), Expect = 2e-46
Identities = 95/153 (62%), Positives = 110/153 (71%), Gaps = 14/153 (9%)
Frame = +2
Query: 59 MADQTEKAFQKQATVFLNRKGGMKXKDM-----RHHKNVGLGFKTPREAIEGTYIDKKCP 223
MA+QTEKAF KQ VFL+ K K K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 224 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRNMSVH 376
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EKRH N+ H
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120
Query: 377 LSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 475
+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 VSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 152
>04_04_1134 +
31137326-31137337,31137964-31138004,31138089-31138189,
31138489-31138637,31138696-31138808,31138954-31139050
Length = 170
Score = 183 bits (446), Expect = 2e-46
Identities = 95/153 (62%), Positives = 110/153 (71%), Gaps = 14/153 (9%)
Frame = +2
Query: 59 MADQTEKAFQKQATVFLNRKGGMKXKDM-----RHHKNVGLGFKTPREAIEGTYIDKKCP 223
MA+QTEKAF KQ VFL+ K K K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 224 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN---------RFEKRHRNMSVH 376
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R+EKRH N+ H
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQGANLPPCRYEKRHSNIPAH 120
Query: 377 LSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 475
+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 VSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 152
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 176 bits (429), Expect = 3e-44
Identities = 79/111 (71%), Positives = 92/111 (82%)
Frame = +2
Query: 143 RHHKNVGLGFKTPREAIEGTYIDKKCPFTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLH 322
R KN+GLGFKTPREAIEGTYIDKKCPFTG VSIRGRI+ G KM RTI++RR+YLH
Sbjct: 25 RFWKNIGLGFKTPREAIEGTYIDKKCPFTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLH 84
Query: 323 YLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 475
++ KY R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNV+KV
Sbjct: 85 FVKKYQRYEKRHSNIPAHISPCFR-VKEGDHVIIGQCRPLSKTVRFNVIKV 134
>04_04_1135 +
31140032-31140043,31140552-31140592,31140680-31140780,
31141113-31141419,31141565-31141661
Length = 185
Score = 171 bits (416), Expect = 1e-42
Identities = 95/168 (56%), Positives = 110/168 (65%), Gaps = 29/168 (17%)
Frame = +2
Query: 59 MADQTEKAFQKQATVFLNRKGGMKXKDM-----RHHKNVGLGFKTPREAIEGTYIDKKCP 223
MA+QTEKAF KQ VFL+ K K K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 224 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYN--------------------- 340
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRQVNNYGFYLCFFSFFFPISD 120
Query: 341 ---RFEKRHRNMSVHLSPCFRDVEIGDIVTIGECRPLSKTVRFNVLKV 475
R+EKRH N+ H+SPCFR V+ GD V IG+CRPLSKTVRFNVLKV
Sbjct: 121 LGCRYEKRHSNIPAHVSPCFR-VKEGDHVIIGQCRPLSKTVRFNVLKV 167
>07_03_0919 -
22594980-22595111,22595398-22595427,22595522-22595587,
22596021-22596107,22596868-22596921,22597696-22597762,
22598099-22598215,22598536-22598637,22598784-22598902,
22598966-22599049,22599220-22599354,22599470-22599505,
22599581-22599700,22600557-22600645,22601507-22601596,
22601629-22601802,22602135-22602235,22602323-22602363,
22602872-22602883
Length = 551
Score = 128 bits (310), Expect = 7e-30
Identities = 63/100 (63%), Positives = 73/100 (73%), Gaps = 5/100 (5%)
Frame = +2
Query: 59 MADQTEKAFQKQATVFLNRKGGMKXKDM-----RHHKNVGLGFKTPREAIEGTYIDKKCP 223
MA+QTEKAF KQ VFL+ K K K R K++GLGFKTPREAIEGTYIDKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60
Query: 224 FTGNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNR 343
FTG VSIRGRI+ G KM RTI++RR+YLH++ KY R
Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQR 100
>08_02_0383 - 16539472-16539633,16543044-16543205
Length = 107
Score = 44.4 bits (100), Expect = 2e-04
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +2
Query: 257 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 436
+ G+V KMQ+++V+ D L + YNR+ KR H D IGD V + R
Sbjct: 4 VVGIVVSNKMQKSVVVAVDRLFHHKMYNRYVKRTSKFMAHDET--EDCNIGDRVKLDPSR 61
Query: 437 PLSKTVRFNVLKV 475
PLSK + V ++
Sbjct: 62 PLSKRKHWVVAEI 74
>04_04_1693 + 35404336-35404515,35405732-35406019,35406189-35406278,
35406487-35406564,35406638-35406718,35407300-35407350,
35407788-35407933,35408169-35408235,35408328-35408387,
35408472-35408501,35408776-35408835,35408936-35409052,
35409790-35409903,35410068-35410166,35410572-35410697,
35410774-35410848,35410958-35411029,35411167-35411277,
35411760-35411843,35413149-35413256,35414207-35414308,
35414393-35414455,35414524-35414598,35414901-35414972,
35415063-35415187,35415251-35415302,35415380-35415448,
35415525-35415540,35415941-35415989,35416607-35417180
Length = 1077
Score = 36.7 bits (81), Expect = 0.042
Identities = 23/68 (33%), Positives = 33/68 (48%)
Frame = +2
Query: 257 LTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGDIVTIGECR 436
LTG V K +T+ + L PKY R E+ + H P ++GD+V + R
Sbjct: 972 LTGRVVTTKADKTVGVEVVRLAPHPKYKRRERIKKKYQAH-DPD-NQFKVGDVVELRRSR 1029
Query: 437 PLSKTVRF 460
P+SKT F
Sbjct: 1030 PISKTKHF 1037
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 31.9 bits (69), Expect = 1.2
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -2
Query: 446 WTKVCIRRSLQYHQSPRP*SKATNARTYSCAVSRTY 339
W C RR Y +SP P + R+YS + SR+Y
Sbjct: 129 WKNRCYRRGRSYSRSPSPRRGRSRGRSYSRSRSRSY 164
>02_05_0389 +
28551649-28551903,28552328-28552402,28552482-28552605,
28552692-28552978,28553147-28553482,28553813-28553869,
28554156-28554382,28554465-28554627,28554912-28554938
Length = 516
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -3
Query: 154 LMVTHVLPLHATFPVQENGGLFLKRFLCLIRHFA*QXKEGNL 29
++V +PL ++ + + +FL+ LC+ H KEGNL
Sbjct: 221 ILVESTIPLMQSYSEKRSHKIFLESLLCMESHCKIHVKEGNL 262
>08_02_1442 +
27120604-27120890,27121029-27121166,27121280-27121382,
27121877-27122036,27122927-27123114,27123203-27124770,
27124882-27125869,27126595-27127098,27127347-27127433,
27127753-27127821,27128012-27128041
Length = 1373
Score = 29.1 bits (62), Expect = 8.4
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = -3
Query: 211 VNVGTLNRLSGSFEA*TDILMVTHVLPLHATFPVQENGGLFLKR 80
++ G L ++SGSF+ T + + LPL+ V E FL+R
Sbjct: 772 ISEGELKQISGSFKGTTSLRTLLMELPLYRGLEVLELRSFFLER 815
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,534,537
Number of Sequences: 37544
Number of extensions: 266593
Number of successful extensions: 542
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4236833328
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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