Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L08
         (1320 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.55 
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    23   6.7  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    23   6.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.55
 Identities = 15/54 (27%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
 Frame = +1

Query: 79  FFXLFFFXXXLFFFXLXFXFFXXFFFFXXXFFFFF--FXXXXXXXLFFFXFFFF 234
           F    FF   +++F   F  F     F    + FF  F       LF   F FF
Sbjct: 136 FVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFF 189



 Score = 24.6 bits (51), Expect = 1.7
 Identities = 11/52 (21%), Positives = 18/52 (34%)
 Frame = +2

Query: 80  FXFCFFFXXXCFFFXSFFXFFXXFFFXXXXFFFFFXXXXLXXCFFFFXFFFF 235
           F  C  +      F   F  F   F     +F++     L   +F++ F  F
Sbjct: 72  FLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIF 123



 Score = 23.8 bits (49), Expect = 2.9
 Identities = 10/66 (15%), Positives = 19/66 (28%)
 Frame = +2

Query: 35  PHVVXXXXXXXXXXXFXFCFFFXXXCFFFXSFFXFFXXFFFXXXXFFFFFXXXXLXXCFF 214
           P ++           F + F      ++F   F  F          ++F        C +
Sbjct: 88  PFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIY 147

Query: 215 FFXFFF 232
           +F   F
Sbjct: 148 YFYCAF 153



 Score = 23.4 bits (48), Expect = 3.8
 Identities = 8/30 (26%), Positives = 13/30 (43%)
 Frame = +1

Query: 88  LFFFXXXLFFFXLXFXFFXXFFFFXXXFFF 177
           +++F   LFF    + F+  F  F     F
Sbjct: 133 IYYFVVPLFFLLCIYYFYCAFIIFTVHLLF 162



 Score = 23.4 bits (48), Expect = 3.8
 Identities = 10/47 (21%), Positives = 14/47 (29%)
 Frame = +2

Query: 80  FXFCFFFXXXCFFFXSFFXFFXXFFFXXXXFFFFFXXXXLXXCFFFF 220
           F  C ++    F   +    F    +     F  F    L  C F F
Sbjct: 142 FLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIF 188



 Score = 23.0 bits (47), Expect = 5.1
 Identities = 8/48 (16%), Positives = 16/48 (33%)
 Frame = +3

Query: 93  FFXFXFVFFXSXFXFFFXXFFFXFXXFFFFFXXXXXXXAFFFXFFFFF 236
           +F + F+     + F++    F     F           FF    ++F
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYF 149



 Score = 22.2 bits (45), Expect = 8.9
 Identities = 9/48 (18%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
 Frame = +1

Query: 94  FFXXXLFFFXLXFXFFXXFFFFXXXFFFFF-FXXXXXXXLFFFXFFFF 234
           F    + F    + F+  F      ++F++ F       LF    ++F
Sbjct: 89  FIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYF 136



 Score = 22.2 bits (45), Expect = 8.9
 Identities = 10/55 (18%), Positives = 18/55 (32%)
 Frame = +1

Query: 70  FXXFFXLFFFXXXLFFFXLXFXFFXXFFFFXXXFFFFFFXXXXXXXLFFFXFFFF 234
           +  +  + F    LF   + +     FF     +F+  F       LF    + F
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHF 169



 Score = 22.2 bits (45), Expect = 8.9
 Identities = 10/54 (18%), Positives = 18/54 (33%)
 Frame = +1

Query: 70  FXXFFXLFFFXXXLFFFXLXFXFFXXFFFFXXXFFFFFFXXXXXXXLFFFXFFF 231
           F  F     F   +++F +   F    ++F   F  F         ++ F   F
Sbjct: 120 FIIFTVHLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAF 173


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 136 FFXXFFFFXXXFFFFF 183
           F   F+FF   FF+FF
Sbjct: 235 FGVSFYFFISTFFYFF 250


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 22.6 bits (46), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 136 FFXXFFFFXXXFFFFF 183
           F   F+FF   FF+FF
Sbjct: 231 FGVSFYFFISTFFYFF 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,546
Number of Sequences: 336
Number of extensions: 1647
Number of successful extensions: 30
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 39049180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)