Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_L07
(1306 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 50 5e-06
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 50 5e-06
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 50 5e-06
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 42 7e-04
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 40 0.003
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 40 0.003
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 38 0.021
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 37 0.036
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 37 0.036
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.59
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 33 0.59
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.59
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.59
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.77
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.77
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.77
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 1.0
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 31 1.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 2.4
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 4.1
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 4.1
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 5.5
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 5.5
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 29 5.5
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 29 7.2
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 29 7.2
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 7.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 7.2
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 7.2
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 29 7.2
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 29 7.2
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 7.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 9.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 49.6 bits (113), Expect = 5e-06
Identities = 31/89 (34%), Positives = 33/89 (37%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP 866
P G PP PPP P P G + G P P P PP G PPPP
Sbjct: 716 PPGLPPITGGPPPPPP----------PGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPP 764
Query: 865 XGGXPPXFXXPXXGXXEAPPFPXXKXGXF 779
GG PP P G + P P G F
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/66 (37%), Positives = 25/66 (37%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP 866
P G PP PPP P G P G P P P PP G GG PPPP
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP--PPGGFKGGPPPPPP 789
Query: 865 XGGXPP 848
G P
Sbjct: 790 PGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 49.6 bits (113), Expect = 5e-06
Identities = 31/89 (34%), Positives = 33/89 (37%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP 866
P G PP PPP P P G + G P P P PP G PPPP
Sbjct: 716 PPGLPPITGGPPPPPP----------PGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPP 764
Query: 865 XGGXPPXFXXPXXGXXEAPPFPXXKXGXF 779
GG PP P G + P P G F
Sbjct: 765 PGGCPPPPPPPPPGGFKGGPPPPPPPGMF 793
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/66 (37%), Positives = 25/66 (37%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP 866
P G PP PPP P G P G P P P PP G GG PPPP
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP--PPGGFKGGPPPPPP 789
Query: 865 XGGXPP 848
G P
Sbjct: 790 PGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 49.6 bits (113), Expect = 5e-06
Identities = 31/89 (34%), Positives = 33/89 (37%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP 866
P G PP PPP P P G + G P P P PP G PPPP
Sbjct: 299 PPGLPPITGGPPPPPP----------PGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPP 347
Query: 865 XGGXPPXFXXPXXGXXEAPPFPXXKXGXF 779
GG PP P G + P P G F
Sbjct: 348 PGGCPPPPPPPPPGGFKGGPPPPPPPGMF 376
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/66 (37%), Positives = 25/66 (37%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP 866
P G PP PPP P G P G P P P PP G GG PPPP
Sbjct: 315 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP--PPGGFKGGPPPPPP 372
Query: 865 XGGXPP 848
G P
Sbjct: 373 PGMFAP 378
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 42.3 bits (95), Expect = 7e-04
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPP-- 872
P G PP F P P P G S G P P P PP G G F P
Sbjct: 162 PSGGPPG-LFDPSGAPPSGGPPGPFGPSGAPP-SGGPPGPFNPSEAPPSGGPTGPFDPSG 219
Query: 871 -PPXGGXPPXFXXPXXGXXEAPPFPXXKXG 785
PP GG P F PP P G
Sbjct: 220 APPSGGPPGPFNPSGAPPSGGPPGPFDPSG 249
Score = 42.3 bits (95), Expect = 7e-04
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPP-- 872
P G PP F P P P G S G P P P PP G G F P
Sbjct: 222 PSGGPPGP-FNPSGAPPSGGPPGPFDPSGAPP-SGGPPGPFNPSGAPPSGGPPGPFDPSG 279
Query: 871 -PPXGGXPPXFXXPXXGXXEAPPFPXXKXG 785
PP GG P F PP P G
Sbjct: 280 APPSGGPPGPFDPSGAPPSGGPPGPFDPSG 309
Score = 42.3 bits (95), Expect = 7e-04
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPP-- 872
P G PP F P P P G S G P P P PP G G F P
Sbjct: 282 PSGGPPGP-FDPSGAPPSGGPPGPFDPSGAQP-SGGPPGPFNPSGAPPSGGPPGPFDPSG 339
Query: 871 -PPXGGXPPXFXXPXXGXXEAPPFPXXKXG 785
PP GG P F PP P G
Sbjct: 340 APPSGGPPGPFNPSGAPPSGGPPGPFDPSG 369
Score = 42.3 bits (95), Expect = 7e-04
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPP-- 872
P G PP F P P P G S G P P P PP G G F P
Sbjct: 327 PSGGPPGP-FDPSGAPPSGGPPGPFNPSGAPP-SGGPPGPFDPSGAPPSGGPPGPFDPSG 384
Query: 871 -PPXGGXPPXFXXPXXGXXEAPPFPXXKXG 785
PP GG P F PP P G
Sbjct: 385 APPSGGPPGPFDPSGAPPSGGPPGPFNPSG 414
Score = 42.3 bits (95), Expect = 7e-04
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPP-- 872
P G PP F P P P G S G P P P PP G G F P
Sbjct: 432 PSGGPPGP-FNPSGAPPSGGPPGPFNPSGAPP-SGGPPGPFNPSGAPPSGGPPGPFDPSG 489
Query: 871 -PPXGGXPPXFXXPXXGXXEAPPFPXXKXG 785
PP GG P F PP P G
Sbjct: 490 APPSGGPPGPFNPSGAPPSGGPPGPFDPSG 519
Score = 41.9 bits (94), Expect = 0.001
Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPP-- 872
P G PP F P P P G S G P P P PP G G F P
Sbjct: 372 PSGGPPGP-FDPSGAPPSGGPPGPFDPSGAPP-SGGPPGPFNPSGAPPSGGPPGPFNPSG 429
Query: 871 -PPXGGXPPXFXXPXXGXXEAPPFPXXKXG 785
PP GG P F PP P G
Sbjct: 430 APPSGGPPGPFNPSGAPPSGGPPGPFNPSG 459
Score = 41.5 bits (93), Expect = 0.001
Identities = 29/85 (34%), Positives = 29/85 (34%), Gaps = 3/85 (3%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPP-- 872
P G PP F P P P G S G P P P PP G G F P
Sbjct: 447 PSGGPPGP-FNPSGAPPSGGPPGPFNPSGAPP-SGGPPGPFDPSGAPPSGGPPGPFNPSG 504
Query: 871 -PPXGGXPPXFXXPXXGXXEAPPFP 800
PP GG P F PP P
Sbjct: 505 APPSGGPPGPFDPSGAPPSGMPPVP 529
Score = 36.3 bits (80), Expect = 0.048
Identities = 20/52 (38%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Frame = -1
Query: 946 SXGGPXPXXPXXXPPXGXXGGXFPP---PPXGGXPPXFXXPXXGXXEAPPFP 800
S G P P P PP G G F P PP GG P F PP P
Sbjct: 148 SGGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGP 199
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 40.3 bits (90), Expect = 0.003
Identities = 23/80 (28%), Positives = 24/80 (30%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP 866
P G PP PP P G P P PP G PPPP
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Query: 865 XGGXPPXFXXPXXGXXEAPP 806
G PP P +PP
Sbjct: 303 PRGSPPTGSLPPPQAGGSPP 322
Score = 37.9 bits (84), Expect = 0.016
Identities = 25/77 (32%), Positives = 26/77 (33%)
Frame = -1
Query: 1030 PXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPPXGGXP 851
P PPP P G + G P P PP G PPPP GG P
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP--PPTGSPPPPPAGGSP 289
Query: 850 PXFXXPXXGXXEAPPFP 800
P P G PP P
Sbjct: 290 P---PPRAGSPPPPPPP 303
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/81 (25%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXX-----GGXFPPP 869
PP + PPP P + P P P PP G GG PP
Sbjct: 265 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 324
Query: 868 PXGGXPPXFXXPXXGXXEAPP 806
G PP +PP
Sbjct: 325 GTGSPPPPPRQKRQAPERSPP 345
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 40.3 bits (90), Expect = 0.003
Identities = 23/80 (28%), Positives = 24/80 (30%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP 866
P G PP PP P G P P PP G PPPP
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Query: 865 XGGXPPXFXXPXXGXXEAPP 806
G PP P +PP
Sbjct: 324 PRGSPPTGSLPPPQAGGSPP 343
Score = 37.9 bits (84), Expect = 0.016
Identities = 25/77 (32%), Positives = 26/77 (33%)
Frame = -1
Query: 1030 PXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPPXGGXP 851
P PPP P G + G P P PP G PPPP GG P
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP--PPTGSPPPPPAGGSP 310
Query: 850 PXFXXPXXGXXEAPPFP 800
P P G PP P
Sbjct: 311 P---PPRAGSPPPPPPP 324
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/81 (25%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXX-----GGXFPPP 869
PP + PPP P + P P P PP G GG PP
Sbjct: 286 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 345
Query: 868 PXGGXPPXFXXPXXGXXEAPP 806
G PP +PP
Sbjct: 346 GTGSPPPPPRQKRQAPERSPP 366
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 40.3 bits (90), Expect = 0.003
Identities = 23/80 (28%), Positives = 24/80 (30%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP 866
P G PP PP P G P P PP G PPPP
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Query: 865 XGGXPPXFXXPXXGXXEAPP 806
G PP P +PP
Sbjct: 309 PRGSPPTGSLPPPQAGGSPP 328
Score = 37.9 bits (84), Expect = 0.016
Identities = 25/77 (32%), Positives = 26/77 (33%)
Frame = -1
Query: 1030 PXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPPXGGXP 851
P PPP P G + G P P PP G PPPP GG P
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP--PPTGSPPPPPAGGSP 295
Query: 850 PXFXXPXXGXXEAPPFP 800
P P G PP P
Sbjct: 296 P---PPRAGSPPPPPPP 309
Score = 31.1 bits (67), Expect = 1.8
Identities = 21/81 (25%), Positives = 24/81 (29%), Gaps = 5/81 (6%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXX-----GGXFPPP 869
PP + PPP P + P P P PP G GG PP
Sbjct: 271 PPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 330
Query: 868 PXGGXPPXFXXPXXGXXEAPP 806
G PP +PP
Sbjct: 331 GTGSPPPPPRQKRQAPERSPP 351
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 37.5 bits (83), Expect = 0.021
Identities = 30/83 (36%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Frame = -1
Query: 1045 PXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP 866
P PP F PPP G P G GGP PP G GG PPPP
Sbjct: 382 PQSGPPGA-FAPPPSAFGAPQGPGG-PGGYGPPPPGGPGAPGSYG-PPQGGPGGFGPPPP 438
Query: 865 XGG---XPPXFXXPXXGXXEAPP 806
G PP P G APP
Sbjct: 439 GGPGAYGPPPTGFPPVG---APP 458
Score = 32.7 bits (71), Expect = 0.59
Identities = 23/86 (26%), Positives = 26/86 (30%), Gaps = 1/86 (1%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPPXG-G 857
P + F PP P P P P G GG PPPP G G
Sbjct: 359 PSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPG 418
Query: 856 XPPXFXXPXXGXXEAPPFPXXKXGXF 779
P + P G P P G +
Sbjct: 419 APGSYGPPQGGPGGFGPPPPGGPGAY 444
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/90 (23%), Positives = 23/90 (25%)
Frame = -1
Query: 1078 GXKPNXXXXXXPXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPX 899
G P P PP + P P+G G P P PP
Sbjct: 286 GFAPPQQFGGPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQ 345
Query: 898 GXXGGXFPPPPXGGXPPXFXXPXXGXXEAP 809
G G P P F P AP
Sbjct: 346 GSFGAPPPQQFHAPSPQSFGGPPPPVSSAP 375
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 36.7 bits (81), Expect = 0.036
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 849 GGXPPXGGGGXKPPXXPXGGXXXGKXGXGPPXEKXXXPLGXP 974
GG P GGG PP P GG G G P + P G P
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 36.7 bits (81), Expect = 0.036
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +3
Query: 849 GGXPPXGGGGXKPPXXPXGGXXXGKXGXGPPXEKXXXPLGXP 974
GG P GGG PP P GG G G P + P G P
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRP 656
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 33.5 bits (73), Expect = 0.34
Identities = 25/80 (31%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP--XG 860
P F PPP P G P G P P PP G PPPP G
Sbjct: 59 PKPSFFIPPPVPNGFIPPPPG-PGGIPP-----PPPMFAGGIPPPPPMMGGIPPPPPMFG 112
Query: 859 GXPPXFXXPXXGXXEAPPFP 800
PP G PP P
Sbjct: 113 APPPPPPPSGLGVAPQPPRP 132
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.59
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +3
Query: 801 GKGGASXXPXX--GXXKXGGXPPXGGGGXKPPXXPXGGXXXGKXG 929
G GG + P G GG GGGG PP P GG G G
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 32.7 bits (71), Expect = 0.59
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +3
Query: 801 GKGGASXXPXX--GXXKXGGXPPXGGGGXKPPXXPXGGXXXGKXG 929
G GG + P G GG GGGG PP P GG G G
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 32.7 bits (71), Expect = 0.59
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -2
Query: 552 PPXXXXXXXPPXGXXKXXPPPQNPGXGVFXXGXGXXPXKPXPXXPGXGG 406
PP P PPP P G+ G G P P P G GG
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 32.7 bits (71), Expect = 0.59
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -2
Query: 552 PPXXXXXXXPPXGXXKXXPPPQNPGXGVFXXGXGXXPXKPXPXXPGXGG 406
PP P PPP P G+ G G P P P G GG
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.77
Identities = 28/84 (33%), Positives = 28/84 (33%), Gaps = 6/84 (7%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP---- 866
PP PPP P P G G P P P P G G PPPP
Sbjct: 290 PPSSGMWPPPPPPPPGRTPG--PPGMP----GMPPPPPPSRFGPPGMGGMPPPPPPGMRY 343
Query: 865 XGG--XPPXFXXPXXGXXEAPPFP 800
GG PP P G PP P
Sbjct: 344 PGGMPPPPPPRYPSAGPGMYPPPP 367
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPX--PXXPXXXPPXGXXG-GXFPPPP 866
PP PPP P P + GP P P PP G G PPPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.77
Identities = 28/84 (33%), Positives = 28/84 (33%), Gaps = 6/84 (7%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPP---- 866
PP PPP P P G G P P P P G G PPPP
Sbjct: 300 PPSSGMWPPPPPPPPGRTPG--PPGMP----GMPPPPPPSRFGPPGMGGMPPPPPPGMRY 353
Query: 865 XGG--XPPXFXXPXXGXXEAPPFP 800
GG PP P G PP P
Sbjct: 354 PGGMPPPPPPRYPSAGPGMYPPPP 377
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 3/59 (5%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPX--PXXPXXXPPXGXXG-GXFPPPP 866
PP PPP P P + GP P P PP G G PPPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.3 bits (70), Expect = 0.77
Identities = 28/102 (27%), Positives = 29/102 (28%), Gaps = 8/102 (7%)
Frame = -1
Query: 1087 FXXGXKPNXXXXXXPXGXPPXKXFXPPPX---PXXXXXXXXGXPRGXXXFSXGGPXPXXP 917
F P P PP PPP P P F+ G P P
Sbjct: 702 FNLNAPPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFG 761
Query: 916 XXXPPXGXXGGXFPPPPXGG-----XPPXFXXPXXGXXEAPP 806
P FPPPP GG PP F G PP
Sbjct: 762 RGAGPMSS----FPPPPRGGMHHMPPPPSFRGGRGGHGGPPP 799
Score = 29.1 bits (62), Expect = 7.2
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Frame = -1
Query: 907 PPXGXXG-GXFPPPPXGGXPPXFXXPXXG-XXEAPPFPXXKXG 785
PP G G PPPP G PP P G PP P + G
Sbjct: 708 PPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQG 750
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 31.9 bits (69), Expect = 1.0
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = -1
Query: 1078 GXKPNXXXXXXPXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPX 899
G PN G P PPP P G S G P P P PP
Sbjct: 498 GHAPNPPPPPPLLGIAPMSTNAPPPPPMP----------GMAPLSTGAPTPPPP---PPV 544
Query: 898 GXXGGXFPPPP 866
G G PPPP
Sbjct: 545 GMANGGPPPPP 555
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 31.5 bits (68), Expect = 1.4
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -1
Query: 940 GGPXPXXPXXXPPXGXXGGXFPPPPXGGXP-PXFXXPXXG 824
G P P PP GG PPPP P P + P G
Sbjct: 32 GAPPPPPACAPPPAPACGGGAPPPPAYAAPAPSYGAPAGG 71
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -1
Query: 973 GXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPPXGGXPPXFXXPXXG 824
G P G GG PP G PPP GG PP P G
Sbjct: 1553 GPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPG 1602
Score = 29.9 bits (64), Expect = 4.1
Identities = 29/117 (24%), Positives = 33/117 (28%), Gaps = 2/117 (1%)
Frame = +2
Query: 407 PPXPGXXGXGFXGXXPXPXKKTPXPGFWGGGXXFXXPXGGXWXXXKXGGKPXKKXXXKGX 586
PP G F G P P + P P G P G +G
Sbjct: 1496 PPMRGGPPM-FRGGPPGPGRGMPSPMMRGSSMRGGFPQRGGGPGMGPSQYYHDSPQNRGP 1554
Query: 587 KXGXXPQK-GXXGGXYPXXPPPK-KKXKKXXPXXXGGKPPXXXKXPXXXP*KNPWGP 751
G P G G PPP+ + P GG PP P P N P
Sbjct: 1555 PMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPP 1611
Score = 29.9 bits (64), Expect = 4.1
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = -1
Query: 1078 GXKPNXXXXXXPXGXPPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPX 899
G P+ P P PPP G P GP P P
Sbjct: 1538 GMGPSQYYHDSPQNRGPPMGGLPPPH-GGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPRL 1596
Query: 898 GXXGGXFPPPPXGGXPP 848
G PPPP GG PP
Sbjct: 1597 GMPPPG-PPPPNGGPPP 1612
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.9 bits (64), Expect = 4.1
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 10/71 (14%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXX----------PXXXPPXGXXGG 884
PP PPP P P G GG P P PP G
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGY 732
Query: 883 XFPPPPXGGXP 851
+PPPP G P
Sbjct: 733 GYPPPPQPGHP 743
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like protein
protein.
Length = 789
Score = 29.9 bits (64), Expect = 4.1
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 10/71 (14%)
Frame = -1
Query: 1033 PPXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXX----------PXXXPPXGXXGG 884
PP PPP P P G GG P P PP G
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGY 732
Query: 883 XFPPPPXGGXP 851
+PPPP G P
Sbjct: 733 GYPPPPQPGHP 743
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 801 GKGGASXXPXXGXXKXGGXPPXGGGGXKPPXXPXGGXXXGKXGXG 935
G GG P G GG P GG G PP G G G G
Sbjct: 176 GHGGMGGPPGHGGQ--GGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +3
Query: 786 PXFXLGKGGASXXPXXGXXKXGGXPPXGGGGXKPPXXPXGGXXXGKXGXGPPXEKXXXPL 965
P +G GG P G G PP GG PP G G G G P P
Sbjct: 154 PPPLMGGGGDPRGPPGGM----GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPG 209
Query: 966 G 968
G
Sbjct: 210 G 210
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 5.5
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +3
Query: 801 GKGGASXXPXXGXXKXGGXPPXGGGGXKPPXXPXGGXXXGKXGXG 935
G GG P G GG P GG G PP G G G G
Sbjct: 456 GHGGMGGPPGHGGQ--GGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
Score = 28.7 bits (61), Expect = 9.5
Identities = 20/61 (32%), Positives = 21/61 (34%)
Frame = +3
Query: 786 PXFXLGKGGASXXPXXGXXKXGGXPPXGGGGXKPPXXPXGGXXXGKXGXGPPXEKXXXPL 965
P +G GG P G G PP GG PP G G G G P P
Sbjct: 434 PPPLMGGGGDPRGPPGGM----GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPG 489
Query: 966 G 968
G
Sbjct: 490 G 490
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/80 (26%), Positives = 24/80 (30%)
Frame = -1
Query: 1030 PXKXFXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPPPXGGXP 851
P + + PPP P F G P P G FP PP P
Sbjct: 95 PPRGYPPPPPQGADTWRGAPPPAHHGHFGPPGHHFQGPPQHFPPGPPRPHFPGPPGPHRP 154
Query: 850 PXFXXPXXGXXEAPPFPXXK 791
P P +AP P K
Sbjct: 155 PE-HYPGPPRPQAPAAPPPK 173
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical protein
B0035.1b protein.
Length = 341
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = -1
Query: 1045 PXGXPPXKX-FXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPP 869
P G PP + PP P G P P P PP G G +PPP
Sbjct: 130 PSGPPPPSMAYGMPPMPSGMMPPR-GMPGAYPPPRGYPPAPAPGVYMPPPGMPGA-YPPP 187
Query: 868 --PXGGXPP 848
P G PP
Sbjct: 188 RMPIGHGPP 196
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical protein
B0035.1a protein.
Length = 298
Score = 29.1 bits (62), Expect = 7.2
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Frame = -1
Query: 1045 PXGXPPXKX-FXPPPXPXXXXXXXXGXPRGXXXFSXGGPXPXXPXXXPPXGXXGGXFPPP 869
P G PP + PP P G P P P PP G G +PPP
Sbjct: 130 PSGPPPPSMAYGMPPMPSGMMPPR-GMPGAYPPPRGYPPAPAPGVYMPPPGMPGA-YPPP 187
Query: 868 --PXGGXPP 848
P G PP
Sbjct: 188 RMPIGHGPP 196
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 934 PXPXXPXXXP-PXGXXGGXFPPPPXGGXPP 848
P P P P P GG PPPP G PP
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPP 800
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 602 PQKGXXGGXYPXXPPPKKKXKKXXP-XXXGGKPPXXXKXPXXXP*KNPWGP 751
P+K GG P PPP + + P +PP P P + P P
Sbjct: 128 PRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSP 178
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 7.2
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -1
Query: 940 GGPXPXXPXXXPPXGXXGGXFPPPPXGGXPP 848
GG P P PP G PPPP PP
Sbjct: 30 GGCAPAAPACAPPPPPMCGCAPPPPPPPPPP 60
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 919 PXXXPPXGXXGGXFPPPPXGGXPPXFXXPXXGXXEAPPFP 800
P PP G GG PPPP PP A P P
Sbjct: 660 PMPVPPPGGLGGFMPPPP---PPPPMPGDLSSLLAAAPPP 696
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 29.1 bits (62), Expect = 7.2
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 919 PXXXPPXGXXGGXFPPPPXGGXPPXFXXPXXGXXEAPPFP 800
P PP G GG PPPP PP A P P
Sbjct: 660 PMPVPPPGGLGGFMPPPP---PPPPMPGDLSSLLAAAPPP 696
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 29.1 bits (62), Expect = 7.2
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Frame = -1
Query: 934 PXPXXPXXXP-PXGXXGGXFPPPPXGGXPP 848
P P P P P GG PPPP G PP
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLGIIPP 800
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +3
Query: 801 GKGGASXXPXXGXXKXGGXPPXGGGGXKPPXXPXGGXXXGKXGXG 935
G GG G GG GGG PP P G G G G
Sbjct: 27 GGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.149 0.508
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,629,886
Number of Sequences: 27780
Number of extensions: 308311
Number of successful extensions: 1033
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3642337300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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