Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L06
         (1321 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   1.6  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   8.6  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 12/34 (35%), Positives = 12/34 (35%)
 Frame = -2

Query: 729 PXPPPXNPGXXXFXGGXGXGXPXXNPXXPXXXGF 628
           P PPP  P      GG   G     P  P   GF
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGF 619



 Score = 25.8 bits (54), Expect = 2.8
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 1107 PXPPXGGXPXPXXGXPPGG 1051
            P PP G  P P  G P GG
Sbjct: 587  PPPPMGPPPSPLAGGPLGG 605


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 8.6
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = +1

Query: 1060 GXSXXGXGXPPXGGGGXXPPXXXXGGXXG 1146
            G    G G P  GGG    P    GG  G
Sbjct: 203  GGGGSGGGAPGGGGGSSGGPGPGGGGGGG 231



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = +1

Query: 1027 GXGGXXLXXPXGXSXXGXGXPPXGGGG 1107
            G GG     P G      G  P GGGG
Sbjct: 203  GGGGSGGGAPGGGGGSSGGPGPGGGGG 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.155    0.546 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,314
Number of Sequences: 2352
Number of extensions: 11516
Number of successful extensions: 26
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 152462631
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)