Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L03
         (1291 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0144 - 1038547-1039650                                           31   2.0  
01_07_0062 - 40826287-40826985                                         30   3.4  
03_06_0559 + 34719296-34719410,34719519-34719577,34719664-347213...    29   6.0  
03_02_0636 + 9998211-9998657                                           29   8.0  

>02_01_0144 - 1038547-1039650
          Length = 367

 Score = 31.1 bits (67), Expect = 2.0
 Identities = 35/122 (28%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
 Frame = +2

Query: 398 MTRSSGQGYNLHQPYIMLLVSRLQVHRLVTAIERITPSLIHEISVTVLLPPTPREIHLET 577
           + RS+ +   L    + LL+ RL  HR V A   +   L H    +   PP P  + L  
Sbjct: 91  LARSAARTIPLPPHSLSLLLRRLARHRSVAAARGLLAEL-HPSPASP--PPRPALLALSD 147

Query: 578 *KIRRR--RRFCQV*WLQATMPVPSIVPTYPTLSLRTNTARRPTGVKMVITRLKMKQMVP 751
              RR   R   Q+  + A   V +  P Y  L      A  P GV  V+ R+K   + P
Sbjct: 148 AVCRRGEPREIAQLLPVLADHGVKADAPVYNALMKAHCAASDPAGVLGVLRRMKDDGVEP 207

Query: 752 TL 757
            L
Sbjct: 208 DL 209


>01_07_0062 - 40826287-40826985
          Length = 232

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
 Frame = +1

Query: 553 ATGNTSRDLEDSPQKKILSGLMAPGDYASTV-YSPNVS----YALSSDEYGSPAYRSQDG 717
           A    S     SP   +   L+APGD  ST   SP +     Y++    Y S     +DG
Sbjct: 129 AAAAASSPAPSSPGFMVRDELLAPGDECSTPGLSPLLGTTGGYSVRVSNYSSE--EEEDG 186

Query: 718 DYSTQDEADGTNATSTKAQAAI 783
           DY   D   G  A   +A+  I
Sbjct: 187 DYGHADGGGGGEAVDDEAEEFI 208


>03_06_0559 +
           34719296-34719410,34719519-34719577,34719664-34721322,
           34722421-34722562,34722645-34723330
          Length = 886

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 586 SPQKKILSGLMAPGDYASTVYSPNVSYALSSDEYGSPAYRSQDGDY 723
           +P  K LSG   P       +  N S   +S E  S  + S DGDY
Sbjct: 487 APVDKPLSGYRLPNHLVEKQFMKNASSVPNSSETSSAKFDSIDGDY 532


>03_02_0636 + 9998211-9998657
          Length = 148

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 147 LVHVWTHFGMSGVATSKMFLKLNSR 221
           L+  W HFG  G+ T + F K+N R
Sbjct: 98  LLKKWVHFGYIGLWTGQSFTKMNDR 122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,638,868
Number of Sequences: 37544
Number of extensions: 415454
Number of successful extensions: 1106
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4015679940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)