Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L03
         (1291 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28409-4|AAC46590.2|  394|Caenorhabditis elegans Saposin-like pr...    31   1.8  
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ...    30   4.1  
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ...    30   4.1  
Z81510-1|CAB04160.1|  367|Caenorhabditis elegans Hypothetical pr...    29   9.5  
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr...    29   9.5  

>U28409-4|AAC46590.2|  394|Caenorhabditis elegans Saposin-like
           protein family protein11 protein.
          Length = 394

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 13/42 (30%), Positives = 27/42 (64%)
 Frame = +2

Query: 629 TMPVPSIVPTYPTLSLRTNTARRPTGVKMVITRLKMKQMVPT 754
           T+ +P+I+PT PT  ++  T + P  + + +  +K+ ++VPT
Sbjct: 106 TIKIPNILPTLPT--IKVPTIKIPDIIPITLPTIKIPEVVPT 145


>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
            protein Y47D3B.5b protein.
          Length = 1136

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
 Frame = +1

Query: 511  SHSRDLGNSPLTANATGNTSRDLEDSPQKKILSGLMAPGDYA----STVYSPNVSYALSS 678
            S +  LG+   T++   +TS D E +  KKI   L+AP   A    ST YSP   +   S
Sbjct: 886  SQASSLGSDVFTSSNPSSTSDDSEKN-HKKIKKTLIAPNMTASVSMSTQYSPPPGFDRLS 944

Query: 679  DEYGSPAYRSQDGDYSTQDEADGT 750
            + + + A  S      T    D T
Sbjct: 945  EPHSTRARSSSTSGMGTSIFEDET 968


>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
            protein Y47D3B.5a protein.
          Length = 1088

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
 Frame = +1

Query: 511  SHSRDLGNSPLTANATGNTSRDLEDSPQKKILSGLMAPGDYA----STVYSPNVSYALSS 678
            S +  LG+   T++   +TS D E +  KKI   L+AP   A    ST YSP   +   S
Sbjct: 886  SQASSLGSDVFTSSNPSSTSDDSEKN-HKKIKKTLIAPNMTASVSMSTQYSPPPGFDRLS 944

Query: 679  DEYGSPAYRSQDGDYSTQDEADGT 750
            + + + A  S      T    D T
Sbjct: 945  EPHSTRARSSSTSGMGTSIFEDET 968


>Z81510-1|CAB04160.1|  367|Caenorhabditis elegans Hypothetical
           protein F21D9.1 protein.
          Length = 367

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 19/60 (31%), Positives = 26/60 (43%)
 Frame = +2

Query: 44  FXFLSSNEIVFSKIITVLNFKRKLCKYYSSANTTFSACLDPFRYEWGGHIENVPETKLKN 223
           F  L    I+F K    ++  R +CK  SS  +T +     F  EW   I+   E KL N
Sbjct: 81  FPLLYQRIIIFEKKNDFVSVYRAMCKKKSSDPSTLAKYSVHFWVEWFYKIDKFGERKLVN 140


>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical
           protein C46A5.4 protein.
          Length = 1432

 Score = 28.7 bits (61), Expect = 9.5
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 499 HHAKSHSRDLGNSPLTANATG 561
           HHA S   D GN PL+ N+TG
Sbjct: 616 HHAFSLPDDYGNCPLSCNSTG 636


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,702,264
Number of Sequences: 27780
Number of extensions: 342339
Number of successful extensions: 932
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3610322468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)