BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_L02
(1240 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089333-1|AAL90071.2| 433|Drosophila melanogaster AT14053p pro... 320 3e-87
AE014296-3569|AAF51741.1| 396|Drosophila melanogaster CG7619-PA... 311 1e-84
S79502-1|AAB35145.1| 396|Drosophila melanogaster 26S protease r... 307 2e-83
AY047574-1|AAK77306.1| 438|Drosophila melanogaster GH08526p pro... 44 4e-04
AE014296-3739|AAF51879.2| 438|Drosophila melanogaster CG11115-P... 44 4e-04
BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p pro... 29 9.9
AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase... 29 9.9
AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA... 29 9.9
>AY089333-1|AAL90071.2| 433|Drosophila melanogaster AT14053p
protein.
Length = 433
Score = 320 bits (785), Expect = 3e-87
Identities = 163/233 (69%), Positives = 183/233 (78%), Gaps = 2/233 (0%)
Frame = +1
Query: 103 KNTKMVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN 282
KNTKMVLESTMIC DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N
Sbjct: 34 KNTKMVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSN 93
Query: 283 -VEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSP 459
VEVLATLTSD GRI SK+H VQP G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP
Sbjct: 94 TVEVLATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSP 153
Query: 460 VNTDEKELVKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSVP 639
+N +E +LVK AKRLKKEKVN D+VSFG+ NN +LT F+N LNGKD + GSHLVSVP
Sbjct: 154 INHEEGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFINALNGKDGT--GSHLVSVP 211
Query: 640 AGGCVVLSEALITS-XXXXXXXXXXXXXXXXXFEFGVDPNVDPELALALRVSM 795
G VLS+AL++S FEFGVDPN DPELALALRVSM
Sbjct: 212 RGS--VLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDPELALALRVSM 262
>AE014296-3569|AAF51741.1| 396|Drosophila melanogaster CG7619-PA
protein.
Length = 396
Score = 311 bits (764), Expect = 1e-84
Identities = 159/229 (69%), Positives = 179/229 (78%), Gaps = 2/229 (0%)
Frame = +1
Query: 115 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 291
MVLESTMIC DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N VEV
Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEV 60
Query: 292 LATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNTD 471
LATLTSD GRI SK+H VQP G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N +
Sbjct: 61 LATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHE 120
Query: 472 EKELVKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSVPAGGC 651
E +LVK AKRLKKEKVN D+VSFG+ NN +LT F+N LNGKD + GSHLVSVP G
Sbjct: 121 EGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFINALNGKDGT--GSHLVSVPRGS- 177
Query: 652 VVLSEALITS-XXXXXXXXXXXXXXXXXFEFGVDPNVDPELALALRVSM 795
VLS+AL++S FEFGVDPN DPELALALRVSM
Sbjct: 178 -VLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDPELALALRVSM 225
>S79502-1|AAB35145.1| 396|Drosophila melanogaster 26S protease
regulatory complexnon-ATPase subunit protein.
Length = 396
Score = 307 bits (754), Expect = 2e-83
Identities = 158/229 (68%), Positives = 178/229 (77%), Gaps = 2/229 (0%)
Frame = +1
Query: 115 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 291
MVLESTMI DNSD+ RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+TL+N VEV
Sbjct: 1 MVLESTMISFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEV 60
Query: 292 LATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNTD 471
LATLTSD GRI SK+H VQP G+INLLTGIRIAHL LKHRQGKNHKMRIVVFVGSP+N +
Sbjct: 61 LATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHE 120
Query: 472 EKELVKLAKRLKKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGGSHLVSVPAGGC 651
E +LVK AKRLKKEKVN D+VSFG+ NN +LT F+N LNGKD + GSHLVSVP G
Sbjct: 121 EGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFINALNGKDGT--GSHLVSVPRGS- 177
Query: 652 VVLSEALITS-XXXXXXXXXXXXXXXXXFEFGVDPNVDPELALALRVSM 795
VLS+AL++S FEFGVDPN DPELALALRVSM
Sbjct: 178 -VLSDALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDPELALALRVSM 225
>AY047574-1|AAK77306.1| 438|Drosophila melanogaster GH08526p
protein.
Length = 438
Score = 44.0 bits (99), Expect = 4e-04
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Frame = +1
Query: 103 KNTKMVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA- 279
+N ++ + +D S+ M D PTRL+ + L NP + +GL+ L
Sbjct: 55 QNRLGMMRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKA 114
Query: 280 -NVEVLATLTSDVG---RIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMR-IVV 444
E + LT + + L V + +L G+ +A +LK +H R IV+
Sbjct: 115 KRAEKVTELTGTSRVHLKALESLANVSLTSEPSLQNGLDLALKSLK--VVPSHASREIVI 172
Query: 445 FVGSPVNTDEKELVKLAKRLKKEKVNCDVVSFGED 549
+GS D ++ LKKE + C V+S +
Sbjct: 173 IMGSLTTCDPVDINLTIDELKKEGIRCSVISLSAE 207
>AE014296-3739|AAF51879.2| 438|Drosophila melanogaster CG11115-PA
protein.
Length = 438
Score = 44.0 bits (99), Expect = 4e-04
Identities = 39/155 (25%), Positives = 66/155 (42%), Gaps = 6/155 (3%)
Frame = +1
Query: 103 KNTKMVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLA- 279
+N ++ + +D S+ M D PTRL+ + L NP + +GL+ L
Sbjct: 55 QNRLGMMRHMFVVLDCSESMSVPDLKPTRLRCTVKLLELFIEEFFDQNPISQLGLIALKA 114
Query: 280 -NVEVLATLTSDVG---RIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMR-IVV 444
E + LT + + L V + +L G+ +A +LK +H R IV+
Sbjct: 115 KRAEKVTELTGTSRVHLKALESLANVSLTSEPSLQNGLDLALKSLK--VVPSHASREIVI 172
Query: 445 FVGSPVNTDEKELVKLAKRLKKEKVNCDVVSFGED 549
+GS D ++ LKKE + C V+S +
Sbjct: 173 IMGSLTTCDPVDINLTIDELKKEGIRCSVISLSAE 207
>BT003614-1|AAO39617.1| 1221|Drosophila melanogaster GH12153p
protein.
Length = 1221
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 139 CVDNSDYMRNGDFLPTRL-QAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSD 312
CV Y TRL Q QD + + +K N NN +LTL +E +AT S+
Sbjct: 134 CVSEYVYYDEVAISLTRLLQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 192
>AF033104-1|AAB95091.3| 1924|Drosophila melanogaster 89B helicase
protein.
Length = 1924
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 139 CVDNSDYMRNGDFLPTRL-QAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSD 312
CV Y TRL Q QD + + +K N NN +LTL +E +AT S+
Sbjct: 836 CVSEYVYYDEVAISLTRLLQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 894
>AE014297-2129|AAF55260.2| 1929|Drosophila melanogaster CG4261-PA
protein.
Length = 1929
Score = 29.5 bits (63), Expect = 9.9
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 139 CVDNSDYMRNGDFLPTRL-QAQQDAVNLVCHSKTRSNPENNVGLLTLANVEVLATLTSD 312
CV Y TRL Q QD + + +K N NN +LTL +E +AT S+
Sbjct: 842 CVSEYVYYDEVAISLTRLLQEAQDFIATLKQNKIPINDFNNAKILTLDQIEAVATTLSE 900
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 44,441,220
Number of Sequences: 53049
Number of extensions: 866523
Number of successful extensions: 1949
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1938
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6621259125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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