Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_L02
(1240 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067211-11|AAK66019.1| 346|Caenorhabditis elegans Proteasome r... 241 9e-64
Z30662-4|CAA83139.3| 376|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z81076-7|CAB03058.1| 411|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z81076-6|CAB03054.1| 387|Caenorhabditis elegans Hypothetical pr... 33 0.42
Z81076-5|CAB03055.1| 389|Caenorhabditis elegans Hypothetical pr... 33 0.42
AF043706-5|ABP57808.1| 536|Caenorhabditis elegans Hypothetical ... 31 1.7
AF043706-3|ABP57807.1| 534|Caenorhabditis elegans Hypothetical ... 31 1.7
U29244-19|AAC71098.1| 95|Caenorhabditis elegans Hypothetical p... 29 9.0
>AF067211-11|AAK66019.1| 346|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 10 protein.
Length = 346
Score = 241 bits (589), Expect = 9e-64
Identities = 129/233 (55%), Positives = 167/233 (71%), Gaps = 6/233 (2%)
Frame = +1
Query: 115 MVLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN-VEV 291
MV ESTMICVDNS+YMRNGDF PTRLQ+QQDAVNLV K R+NPEN VG+L++AN V+V
Sbjct: 1 MVQESTMICVDNSEYMRNGDFQPTRLQSQQDAVNLVTQCKLRANPENAVGILSMANSVQV 60
Query: 292 LATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNTD 471
L++L+++ GR+M K H ++P G N + GI+IAHLALKHRQ +NHKMR+V+F+GSP+
Sbjct: 61 LSSLSTEQGRLMMKNHSIEPFGKCNFIAGIKIAHLALKHRQNRNHKMRVVLFIGSPLEEI 120
Query: 472 E-KELVKLAKRLKKEKVNCDVVSFGE-DSENNPLLTTFVNTLNGKDTSTGGSHLVSVPAG 645
E ELVK+AK++KKEKV CDV+ FGE +S+ + +TFV+TLNGK+ S GS L+ VP G
Sbjct: 121 EMNELVKIAKKMKKEKVLCDVIMFGENESDGHEKFSTFVDTLNGKEGS--GSSLIVVPQG 178
Query: 646 GCVVLSEALITS---XXXXXXXXXXXXXXXXXFEFGVDPNVDPELALALRVSM 795
L++AL+ S FG+D DP+LALALRVSM
Sbjct: 179 SS--LTDALLQSSVCKNEDGQAAFGGGGNGMDNAFGMDVENDPDLALALRVSM 229
>Z30662-4|CAA83139.3| 376|Caenorhabditis elegans Hypothetical
protein T16H12.4 protein.
Length = 376
Score = 40.3 bits (90), Expect = 0.003
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 6/150 (4%)
Frame = +1
Query: 118 VLESTMICVDNSDYMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLTLAN--VEV 291
++ MI +D S +M + P+R A+ NP +GL+T + +
Sbjct: 61 IMRHVMIVIDCSRFMTSKAMPPSRFVVVMKALQTFLDRFFEQNPIAQIGLITCKDRKADR 120
Query: 292 LATLTSDVGRIMSKLHRVQP---NGDINLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPV 462
L +T ++ + L+ + GD +L +++A LK G H R VV V S +
Sbjct: 121 LTMMTGNIRVLKESLNTLTEAFCGGDFSLQNALQLACANLKGMPG--HVSREVVLVISAL 178
Query: 463 NT-DEKELVKLAKRLKKEKVNCDVVSFGED 549
+T D + + +K+ + C + +
Sbjct: 179 STIDPGNIYSTIETMKRMNIRCSAIGLSAE 208
>Z81076-7|CAB03058.1| 411|Caenorhabditis elegans Hypothetical
protein F35C5.6 protein.
Length = 411
Score = 33.1 bits (72), Expect = 0.42
Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +1
Query: 274 LANVEVLATLTSDVGRIMSKLHRVQPNGDINLLTGIRIAHLALKHRQGK----NHKMRIV 441
+A++ +L ++ + S L++V + D L GI A L+ + N+K +V
Sbjct: 117 VADLNLLQSIDDLYQSVFSTLNQVSNSDDSFLAKGIGAAENVLQSGRTNGVRSNYKRLVV 176
Query: 442 VFVGSPVNTDEKELVKLAKRLKKEKVNCDVVSFGEDSE 555
V+ + E + + +A RLK V V+F +D +
Sbjct: 177 VYASAYKGEGELDPIPVADRLKSSGVVVSTVAFDQDGD 214
>Z81076-6|CAB03054.1| 387|Caenorhabditis elegans Hypothetical
protein F35C5.5b protein.
Length = 387
Score = 33.1 bits (72), Expect = 0.42
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Frame = +1
Query: 259 VGLLTLANVEVLATLTSDVGR------IMSKLHRVQPNG-----DINLLTGIRIAHLAL- 402
VGL+T N E AT+ +D+ R + S + ++ PN D+ L GI A L
Sbjct: 80 VGLVTY-NTE--ATIQADLNRFQSPDDLFSTVFQILPNDLSTSEDVFLAKGIGAAEQLLA 136
Query: 403 ---KHRQGKNHKMRIVVFVGSPVNTDEKELVKLAKRLKKEKVNCDVVSFGEDSE 555
K+ KN+K ++V+ + + E++ +A+RLK V+ V+F + +
Sbjct: 137 AGRKNNTRKNYKQMVIVYASAYNDEGEEDPRPIAERLKASGVSIATVAFDQTGD 190
>Z81076-5|CAB03055.1| 389|Caenorhabditis elegans Hypothetical
protein F35C5.5a protein.
Length = 389
Score = 33.1 bits (72), Expect = 0.42
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 15/114 (13%)
Frame = +1
Query: 259 VGLLTLANVEVLATLTSDVGR------IMSKLHRVQPNG-----DINLLTGIRIAHLAL- 402
VGL+T N E AT+ +D+ R + S + ++ PN D+ L GI A L
Sbjct: 80 VGLVTY-NTE--ATIQADLNRFQSPDDLFSTVFQILPNDLSTSEDVFLAKGIGAAEQLLA 136
Query: 403 ---KHRQGKNHKMRIVVFVGSPVNTDEKELVKLAKRLKKEKVNCDVVSFGEDSE 555
K+ KN+K ++V+ + + E++ +A+RLK V+ V+F + +
Sbjct: 137 AGRKNNTRKNYKQMVIVYASAYNDEGEEDPRPIAERLKASGVSIATVAFDQTGD 190
>AF043706-5|ABP57808.1| 536|Caenorhabditis elegans Hypothetical
protein ZC123.4b protein.
Length = 536
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -2
Query: 771 KLWVHIGIYSKFERRQTRARRACSITTYQRTCYQSLRKHNTASGRHRHKVTSPSR 607
K+ HIG++ E + R +CS++ ++R ++ HR SP R
Sbjct: 4 KITSHIGVWFGLEEAERPMRASCSLSMIHHPQLTAVRSSKSSENLHRITTMSPQR 58
>AF043706-3|ABP57807.1| 534|Caenorhabditis elegans Hypothetical
protein ZC123.4a protein.
Length = 534
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = -2
Query: 771 KLWVHIGIYSKFERRQTRARRACSITTYQRTCYQSLRKHNTASGRHRHKVTSPSR 607
K+ HIG++ E + R +CS++ ++R ++ HR SP R
Sbjct: 4 KITSHIGVWFGLEEAERPMRASCSLSMIHHPQLTAVRSSKSSENLHRITTMSPQR 58
>U29244-19|AAC71098.1| 95|Caenorhabditis elegans Hypothetical
protein ZK1248.17 protein.
Length = 95
Score = 28.7 bits (61), Expect = 9.0
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 364 NLLTGIRIAHLALKHRQGKNHKMRIVVFVGSPVNTDEKELVKLAKRLKKEKVNCDVVSFG 543
++ T RI LK++ ++ + G P + KE V LA V+CD +FG
Sbjct: 17 HMTTSTRITSRFLKNKTTNMKRLGVDPPCGVP---EPKEDVLLA-------VSCDAFAFG 66
Query: 544 EDSENNPLLTT-FVNTLNG 597
+D NN +T + NT +G
Sbjct: 67 QDDTNNDRITVEWTNTPDG 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,547,298
Number of Sequences: 27780
Number of extensions: 440300
Number of successful extensions: 1026
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1022
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3432936682
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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