Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_L02
         (1240 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   7.3  
AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    23   7.3  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = +1

Query: 505 KKEKVNCDVVSFGEDSENNPLLTTFVNTLNGKDTSTGG 618
           KK+  +CD + +       PL T  V          GG
Sbjct: 565 KKQPSDCDTLEYRNGEVTTPLFTPAVGVAAASAGGAGG 602


>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 14/60 (23%), Positives = 26/60 (43%)
 Frame = +3

Query: 33  FLRFIVRIELPXVVFALINXSLLKKY*NGLRKYYDLCGQ**LHEKWRFLADTTASSAGCC 212
           FL FI+ +++   V+A I       + N   KY ++     L+ + +   D    +  CC
Sbjct: 87  FLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLNSESKDFIDFIQKNLQCC 146


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 268,337
Number of Sequences: 438
Number of extensions: 5194
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42262176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)