Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_K24
(1298 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.009
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.037
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.61
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.5
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 7.5
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.009
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +3
Query: 777 KXPPPXPP-XXXPRXXKKXPPXXPP-XXXGGXPPXXPXXGXXXXGGXXPPP 923
K PPP PP P P PP GG PP P G G PPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.3 bits (60), Expect = 2.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 771 PPKXPPPXPPXXXPRXXKKXPPXXPPXXXGGXPPXXP 881
P P P PP P PP PP G PP P
Sbjct: 744 PAPAPIPVPP-PAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +2
Query: 824 KXXPPXXPXXXXGXPPXXP---PXGXPPXGGGXPPPXXGGXXXKXPP 955
K PP P P P P P GG PPP G PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP 776
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.037
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +3
Query: 777 KXPPPXPPXXXPRXXKKXPPXXPPXXXGGXPPXXPXXGXXXXGGXXPPPXGGGXXKXPPP 956
K PPP PP R + PP PP P G PP G PPP
Sbjct: 309 KRPPPPPPPS--RRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 33.9 bits (74), Expect = 0.049
Identities = 22/79 (27%), Positives = 29/79 (36%), Gaps = 14/79 (17%)
Frame = +1
Query: 688 PPPXKKKKXXPPXGGGK-------PPXXXKKNXG----XPPK---XPPRAPXFXXPXXKK 825
PPP ++ + PP G G PP + N PP+ PP P P +
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR 374
Query: 826 KXPPXXPXGXXGGPPXXPP 882
+ PP PP PP
Sbjct: 375 QPPPLSSSRAVSNPPAPPP 393
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 2/64 (3%)
Frame = +2
Query: 770 PPQ--KXPPXPPXXXXPXXKKXXPPXXPXXXXGXPPXXPPXGXPPXGGGXPPPXXGGXXX 943
PPQ PP PP P + PP PP PP P PP
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPP-APPPAIPGRSAPALPPLGNASRT 412
Query: 944 KXPP 955
PP
Sbjct: 413 STPP 416
Score = 32.3 bits (70), Expect = 0.15
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Frame = +2
Query: 758 KTXXPPQKXPPXPPXXXXPXXKKXXPPXXPXXXXGXPPXXPPXG-XPPXGGGXP--PP 922
+T PP PP P P PP P PP P PP G P PP
Sbjct: 411 RTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPP 468
Score = 29.9 bits (64), Expect = 0.80
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 3/74 (4%)
Frame = +3
Query: 741 PXGXXKKXXXPPKXPPP-XPPXXXPRXXKKXPPXXPPXXXGG--XPPXXPXXGXXXXGGX 911
P G + PP PP PP P PP P PP P G
Sbjct: 405 PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Query: 912 XPPPXGGGXXKXPP 953
PP PP
Sbjct: 465 AAPPLPPAAPAPPP 478
Score = 29.5 bits (63), Expect = 1.1
Identities = 14/39 (35%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Frame = +3
Query: 771 PPKXPPPXPPXXXPRXXKKXPPXXPPXXXG--GXPPXXP 881
PP P PP P PP PP G PP P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSP 271
Score = 29.1 bits (62), Expect = 1.4
Identities = 19/75 (25%), Positives = 20/75 (26%), Gaps = 3/75 (4%)
Frame = +3
Query: 741 PXGXXKKXXXPPKXPPPX---PPXXXPRXXKKXPPXXPPXXXGGXPPXXPXXGXXXXGGX 911
P G PP+ P PP PP PP G P P G
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTST 414
Query: 912 XPPPXGGGXXKXPPP 956
P P PP
Sbjct: 415 PPVPTPPSLPPSAPP 429
Score = 28.7 bits (61), Expect = 1.9
Identities = 17/64 (26%), Positives = 19/64 (29%)
Frame = +1
Query: 691 PPXKKKKXXPPXGGGKPPXXXKKNXGXPPKXPPRAPXFXXPXXKKKXPPXXPXGXXGGPP 870
PP + P G PP + PP PP P P PP PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP----ALPPLGNASRTSTPP 416
Query: 871 XXPP 882
P
Sbjct: 417 VPTP 420
Score = 27.9 bits (59), Expect = 3.2
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +2
Query: 785 PPXPPXXXXPXXKKXXPPXXPXXXXGXPPXXPPXGXPPXGGGXPPPXXGGXXXKXPP 955
PP PP P P PP PP P G PPP PP
Sbjct: 337 PPPPPP---PRSNAAGSIPLPPQGRSAPPPPPPRSAPST-GRQPPPLSSSRAVSNPP 389
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/53 (28%), Positives = 16/53 (30%), Gaps = 2/53 (3%)
Frame = +2
Query: 770 PPQKXPPXPPXXXXPXXKKXXPPXXPXXXXGXPPXXPPXGXP--PXGGGXPPP 922
P + P PP P P PP PP P P G PP
Sbjct: 396 PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 26.2 bits (55), Expect = 9.9
Identities = 13/46 (28%), Positives = 13/46 (28%)
Frame = +2
Query: 785 PPXPPXXXXPXXKKXXPPXXPXXXXGXPPXXPPXGXPPXGGGXPPP 922
PP PP PP PP P PP PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP 433
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.11
Identities = 19/42 (45%), Positives = 19/42 (45%)
Frame = -1
Query: 881 GGXXGGPPXXPXGXXGGXFFXXXGXXXXGARGGXFGGXPXFF 756
GG GGPP P G G F G G GG FGG P F
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFGGEG-HHHGGHGG-FGGGPGGF 233
Score = 30.3 bits (65), Expect = 0.61
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = -3
Query: 918 GGXPPPXGGXPXGGXXGG---XPXXXXGXXGGXFFFXXGXXKXGGXGGXFWGG 769
GG PP GG G GG G GG F G GG G F GG
Sbjct: 198 GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 881 GGXXGGPPXXPXGXXGGXFFXXXGXXXXGARGGXFGGXP 765
GG GG P G GG G G G FGG P
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.61
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +2
Query: 770 PPQKXPPXPPXXXXPXXKKXXPPXXPXXXXGXPPXXPPXGXPPXGGGXPPPXXGGXXXKX 949
P PP P P P P P P PP PPP K
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKA-PPIPSSLPPPAQPAAPVKS 183
Query: 950 PP 955
PP
Sbjct: 184 PP 185
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/63 (25%), Positives = 20/63 (31%)
Frame = +1
Query: 691 PPXKKKKXXPPXGGGKPPXXXKKNXGXPPKXPPRAPXFXXPXXKKKXPPXXPXGXXGGPP 870
PP + + PP P + P P +AP P PP P PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAP----PIPSSLPPPAQPAAPVKSPP 185
Query: 871 XXP 879
P
Sbjct: 186 SAP 188
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/45 (33%), Positives = 15/45 (33%), Gaps = 3/45 (6%)
Frame = +2
Query: 773 PQKXPPXP---PXXXXPXXKKXXPPXXPXXXXGXPPXXPPXGXPP 898
P K PP P P P PP P PP P PP
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 1.4
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 771 PPKXPPPXPPXXXPRXXKKXPPXXPP 848
PP PPP PP + PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 9.9
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 866 PPXXPPXGXPPXGGGXPPPXXG 931
PP PP G P PPP G
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPG 31
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +2
Query: 773 PQKXPPXPPXXXXPXXKKXXPPXXPXXXXGXPPXXPPXGXPPXGGGXPP 919
P PP P P P P PP PP P PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 28.3 bits (60), Expect = 2.5
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 770 PPQKXPPXPPXXXXPXXKKXXPPXXPXXXXGXPPXXPPXGXP 895
PPQ P PP P PP P G PP PP P
Sbjct: 1699 PPQMSAPTPP---PPPMSVPPPPSAPPMPAG-PPSAPPPPLP 1736
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 3/47 (6%)
Frame = +2
Query: 788 PXPPXXXXPXXKKXXPPXXPXXXXGXPPXXPPXGXPP---XGGGXPP 919
P P P P P G PP PP PP G PP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 26.2 bits (55), Expect = 9.9
Identities = 14/44 (31%), Positives = 14/44 (31%), Gaps = 2/44 (4%)
Frame = +2
Query: 773 PQKXPPXPPXXXXPXXKKXX--PPXXPXXXXGXPPXXPPXGXPP 898
P PP P P K P P PP P G PP
Sbjct: 1079 PSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/42 (26%), Positives = 15/42 (35%)
Frame = +1
Query: 688 PPPXKKKKXXPPXGGGKPPXXXKKNXGXPPKXPPRAPXFXXP 813
PPP ++ PP P + PP+ P P P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPPVQAYP 247
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.313 0.150 0.504
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,327,090
Number of Sequences: 5004
Number of extensions: 33690
Number of successful extensions: 149
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 709422546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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