Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_K24
         (1298 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    32   0.042
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.22 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   8.4  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 31.9 bits (69), Expect = 0.042
 Identities = 28/105 (26%), Positives = 33/105 (31%), Gaps = 3/105 (2%)
 Frame = +1

Query: 583 PXKRGGTPXKKFXKKXPQRXQXXKRXGXGGFTXXXP-PPXKKKKXXPPXGGGKPPXXXKK 759
           P + GG   +      P R Q       G      P PP  +    PP  G  PP     
Sbjct: 211 PPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPN 270

Query: 760 NXGXP-PKXPPRAPXFXXPXXKKKX-PPXXPXGXXGGPPXXPPXG 888
             G P P+  P+              PP  P    GG P  PP G
Sbjct: 271 PMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPPQG 315



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 16/62 (25%), Positives = 18/62 (29%)
 Frame = +2

Query: 770 PPQKXPPXPPXXXXPXXKKXXPPXXPXXXXGXPPXXPPXGXPPXGGGXPPPXXGGXXXKX 949
           PP+   P  P    P      PP  P       P  PP   P    G  P        + 
Sbjct: 200 PPRTGTPTQPQPPRPGGMYPQPPGVPMPMR---PQMPPGAVPGMQPGMQPRPPSAQGMQR 256

Query: 950 PP 955
           PP
Sbjct: 257 PP 258



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 16/58 (27%), Positives = 18/58 (31%)
 Frame = +3

Query: 783 PPPXPPXXXPRXXKKXPPXXPPXXXGGXPPXXPXXGXXXXGGXXPPPXGGGXXKXPPP 956
           PP       P    + PP  PP   GG  P          GG   P    G  + P P
Sbjct: 248 PPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQNSNLSGGM--PSGMVGPPRPPMP 303


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 0.22
 Identities = 18/50 (36%), Positives = 18/50 (36%)
 Frame = +3

Query: 771 PPKXPPPXPPXXXPRXXKKXPPXXPPXXXGGXPPXXPXXGXXXXGGXXPP 920
           PP  PPP PP   P       P   P   G  PP     G    GG  PP
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGP--AGSRPPLPNLLG---FGGAAPP 625



 Score = 27.1 bits (57), Expect = 1.2
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -3

Query: 933 PPXXGGGXPPPXGGXPXGGXXGGXP 859
           PP   G  P P  G P GG  G  P
Sbjct: 587 PPPPMGPPPSPLAGGPLGGPAGSRP 611



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
 Frame = +3

Query: 798 PXXXPRXXKKXPPXXPPXXXGGXPPXXPXXGXXXXG--GXXPP-PXGGGXXKXPPP 956
           P   P      PP  PP      PP  P  G    G  G  PP P   G     PP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 6/60 (10%)
 Frame = +1

Query: 721 PXGGGKPPXXXKKNXGXPPKX--PP----RAPXFXXPXXKKKXPPXXPXGXXGGPPXXPP 882
           P G   PP         PP+   PP    RAP F     + + P   P      PP  PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPP 586


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 8.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 536 GGGGGXPPPXXGXXGXPXKGG 598
           G GGG P    G  G P  GG
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGG 226


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.313    0.150    0.504 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,125
Number of Sequences: 2352
Number of extensions: 12914
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149601402
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)