Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_K19
         (1234 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0D6X0 Cluster: Os07g0429600 protein; n=6; Oryza sativa...    35   5.0  
UniRef50_A6BKE6 Cluster: Putative uncharacterized protein; n=2; ...    34   8.7  

>UniRef50_Q0D6X0 Cluster: Os07g0429600 protein; n=6; Oryza
           sativa|Rep: Os07g0429600 protein - Oryza sativa subsp.
           japonica (Rice)
          Length = 107

 Score = 34.7 bits (76), Expect = 5.0
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 569 SRTLAGCGYCPSENGKTVCVGCYSGRRTSI*CAS*TSFPLLAA 441
           S T A CG C S   K  CVGC +   ++  C +   FP + A
Sbjct: 24  SATAAQCGCCISSRAKACCVGCIAAGGSNSVCKNTCRFPCILA 66


>UniRef50_A6BKE6 Cluster: Putative uncharacterized protein; n=2;
           Clostridiales|Rep: Putative uncharacterized protein -
           Dorea longicatena DSM 13814
          Length = 442

 Score = 33.9 bits (74), Expect = 8.7
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +2

Query: 314 YTWVNHTVLMLLFQIFWKVSQISDYLKGRSVEKPKNELQL 433
           YTWVN    +L   + + V+ I DY +G  V KP+    L
Sbjct: 337 YTWVNELCQVLSENVDYAVNHIRDYYRGIEVSKPQGTYML 376


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 943,594,160
Number of Sequences: 1657284
Number of extensions: 18257442
Number of successful extensions: 41005
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40992
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 124315585013
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)