Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_K16
         (1326 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            30   0.13 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.93 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.2  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   2.1  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    26   2.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 30.3 bits (65), Expect = 0.13
 Identities = 13/32 (40%), Positives = 13/32 (40%)
 Frame = +3

Query: 453 PPPPPPXKXXPPPXXGGGGGXXPPXGGGXXXP 548
           P PPPP    PPP    GG    P G     P
Sbjct: 583 PAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 25.8 bits (54), Expect = 2.8
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +2

Query: 794 PPSPPXXXGXPXPTPPGXXPPP 859
           PP PP   G     PP   PPP
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPP 551



 Score = 25.8 bits (54), Expect = 2.8
 Identities = 14/44 (31%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
 Frame = +2

Query: 797 PSPPXXXGXPXPTPPGXXPPPXGGXXPXRGGGXKPP-PXXXGGG 925
           P+       P P P G  P P  G       G +PP P   G G
Sbjct: 577 PNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFG 620



 Score = 25.8 bits (54), Expect = 2.8
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = -2

Query: 923 PPPXXXGGVXPPPPGXGXPPPXGGEXPXGG 834
           PPP       PPPP  G PP      P GG
Sbjct: 581 PPP-----APPPPPPMGPPPSPLAGGPLGG 605



 Score = 24.6 bits (51), Expect = 6.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 1195 GGXFXXPPPPPP 1230
            GG    PPPPPP
Sbjct: 525  GGPLGPPPPPPP 536



 Score = 24.6 bits (51), Expect = 6.5
 Identities = 14/41 (34%), Positives = 14/41 (34%), Gaps = 4/41 (9%)
 Frame = +2

Query: 794 PPSPPXXXGXPXPTPPGXXPPPXGGXXPXRG----GGXKPP 904
           PP PP     P P   G    P G   P       GG  PP
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 792 PPPPPPXXXGXPXXPPXG 845
           P PPPP   G P  P  G
Sbjct: 583 PAPPPPPPMGPPPSPLAG 600


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.93
 Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
 Frame = -2

Query: 998 GXPPGXKXFFXXXG-GPQKXFXXXXXPPPXXXGGVXPPPPGXGXPPPXGGEXPXG 837
           G PPG +        GP +       P P   GG+ P PP  G P P   + P G
Sbjct: 184 GMPPGPQMMRPPGNVGPPRT-GTPTQPQPPRPGGMYPQPP--GVPMPMRPQMPPG 235



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
 Frame = +2

Query: 797 PSPPXXXGXPXPTPPGXXPPPXGG----XXPXRGGGXKPPP 907
           P+P    G     PPG   PP  G      P R GG  P P
Sbjct: 181 PNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQP 221



 Score = 24.2 bits (50), Expect = 8.6
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +3

Query: 792 PPPPPPXXXGXPXXPPXG 845
           P PP P   G P  PP G
Sbjct: 298 PRPPMPMQGGAPGGPPQG 315


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 1.2
 Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
 Frame = +3

Query: 474 KXXPPPXXGGGGGXXPPXGGG--XXXPXKGGG 563
           K   P   GGG G   P GGG     P  GGG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGG 227



 Score = 26.2 bits (55), Expect = 2.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = -3

Query: 838 GGXXGXPXXXGGGGGG 791
           GG  G P   GGGGGG
Sbjct: 216 GGSSGGPGPGGGGGGG 231



 Score = 25.4 bits (53), Expect = 3.7
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +2

Query: 839 PGXXPPPXGGXXPXRGGGXKPPPXXXGGG 925
           PG      GG  P  GGG    P   GGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGG 228


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP protein.
          Length = 151

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 20/77 (25%), Positives = 21/77 (27%)
 Frame = -2

Query: 1073 GPPPPXXFFXXPPXXPXFFXXFXXXGXPPGXKXFFXXXGGPQKXFXXXXXPPPXXXGGVX 894
            GPP P      PP               PG         GP         PPP     + 
Sbjct: 70   GPPKPN--ISIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPTMG 127

Query: 893  PPPPGXGXPPPXGGEXP 843
             PP G G  PP     P
Sbjct: 128  MPPMGLGMRPPVMSAAP 144



 Score = 25.0 bits (52), Expect = 4.9
 Identities = 14/33 (42%), Positives = 14/33 (42%)
 Frame = +3

Query: 450 GPPPPPPXKXXPPPXXGGGGGXXPPXGGGXXXP 548
           GP PPP     PPP      G  PP G G   P
Sbjct: 107 GPLPPPMMGMRPPPMMVPTMG-MPPMGLGMRPP 138


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = -1

Query: 924 PPPXXXGGGFXPPPRXGXXPPXGGGXXPGGVGXG 823
           PP    G    P P  G     G G   GG+G G
Sbjct: 78  PPQTSLGLSHGPSPGAGGTGSGGSGGGSGGIGSG 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.308    0.149    0.490 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 821,146
Number of Sequences: 2352
Number of extensions: 17026
Number of successful extensions: 58
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 153280125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)