Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_K15
(1275 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0058 + 17548945-17548947,17549234-17549281,17549618-175496... 305 4e-83
01_03_0277 + 14496298-14496300,14496875-14496952,14497061-144972... 305 4e-83
02_01_0047 - 316960-317397,317647-317744,317837-318017,318122-31... 304 1e-82
04_04_0040 + 22322839-22324173 33 0.48
08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378 31 1.9
07_03_1757 + 29250163-29250349,29250612-29250813,29250898-292510... 30 4.5
05_02_0043 + 5964749-5966406,5966725-5966791,5967174-5967329,596... 30 4.5
12_02_0735 - 22636835-22639502,22639755-22640734 29 5.9
11_06_0087 - 19919224-19922304 29 5.9
04_03_1015 - 21734381-21736534 29 5.9
06_01_0083 - 659510-661267,661577-662384,662700-663646 29 7.8
>05_04_0058 +
17548945-17548947,17549234-17549281,17549618-17549695,
17549952-17550132,17550223-17550320,17550827-17551258
Length = 279
Score = 305 bits (749), Expect = 4e-83
Identities = 141/231 (61%), Positives = 175/231 (75%)
Frame = +1
Query: 205 PSTGPHKLRACLPLVLFLRXRLKSALXGNAVLKIVXQRLIKVDGXVRPDPTYPAGFMDVV 384
PS+GPHK R CLPL+L LR RLK AL V+ I+ QR + VDG VR D TYPAGFMDVV
Sbjct: 47 PSSGPHKARECLPLILILRNRLKYALTYREVISILMQRHVMVDGKVRTDKTYPAGFMDVV 106
Query: 385 SIEQPNELFRLIYXVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP 564
SI + E FRL+Y KGRF +H I E+AK+KLCKV+ V G K +P+L T+DGRTIRYP
Sbjct: 107 SIAKTGENFRLLYDTKGRFRLHSIKDEDAKFKLCKVRSVQFGQKGIPFLNTNDGRTIRYP 166
Query: 565 DPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHI 744
DPLIK ND+I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I SRE+H GSF+ +H+
Sbjct: 167 DPLIKANDTIKIDLETNKIVDFIKFDVGNIVMVTGGRNTGRVGVIKSREKHKGSFETIHV 226
Query: 745 KDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAXKVA 897
+D+ GH FATR+ NVF IGK K ++SLP+GKGI+L+I EE KR A A
Sbjct: 227 EDALGHQFATRMGNVFTIGKERKPWVSLPKGKGIKLSIIEEARKRNAEAAA 277
>01_03_0277 +
14496298-14496300,14496875-14496952,14497061-14497241,
14497348-14497445,14497542-14497979
Length = 265
Score = 305 bits (749), Expect = 4e-83
Identities = 139/232 (59%), Positives = 177/232 (76%)
Frame = +1
Query: 205 PSTGPHKLRACLPLVLFLRXRLKSALXGNAVLKIVXQRLIKVDGXVRPDPTYPAGFMDVV 384
PS+GPHK R CLPL+L +R RLK AL V+ I+ QR + VDG VR D TYPAGFMDV+
Sbjct: 31 PSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVI 90
Query: 385 SIEQPNELFRLIYXVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP 564
SI + E +RL+Y KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRTIRYP
Sbjct: 91 SIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYP 150
Query: 565 DPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHI 744
DPLIK ND+I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H+
Sbjct: 151 DPLIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 210
Query: 745 KDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAXKVAA 900
+D+ GH FATRL NVF IGKG K ++SLP+GKGI+L+I EE+ KR A AA
Sbjct: 211 EDALGHAFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQAA 262
>02_01_0047 -
316960-317397,317647-317744,317837-318017,318122-318199,
319023-319025
Length = 265
Score = 304 bits (746), Expect = 1e-82
Identities = 138/232 (59%), Positives = 177/232 (76%)
Frame = +1
Query: 205 PSTGPHKLRACLPLVLFLRXRLKSALXGNAVLKIVXQRLIKVDGXVRPDPTYPAGFMDVV 384
PS+GPHK R CLPL+L +R RLK AL V+ I+ QR + VDG VR D TYPAGFMDV+
Sbjct: 31 PSSGPHKSRECLPLILIIRNRLKYALTYREVISILMQRHVLVDGKVRTDKTYPAGFMDVI 90
Query: 385 SIEQPNELFRLIYXVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP 564
SI + E +RL+Y KGRF + + E+AK+KLCKV+ V G K +PYL T+DGRTIRYP
Sbjct: 91 SIPKTGENYRLLYDTKGRFRLQSVKDEDAKFKLCKVRSVQFGQKGIPYLNTYDGRTIRYP 150
Query: 565 DPLIKVNDSIQLDIATTKIMDFIKFESGNLCMITGGRNLGRVGTIVSRERHPGSFDIVHI 744
DP+IK ND+I++D+ T KI+DFIKF+ GN+ M+TGGRN GRVG I +RE+H GSF+ +H+
Sbjct: 151 DPIIKANDTIKIDLETNKIVDFIKFDVGNVVMVTGGRNTGRVGVIKNREKHKGSFETIHV 210
Query: 745 KDSTGHTFATRLNNVFIIGKGTKAYISLPRGKGIRLTIAEERDKRIAXKVAA 900
+D+ GH FATRL NVF IGKG K ++SLP+GKGI+L+I EE+ KR A AA
Sbjct: 211 EDALGHQFATRLGNVFTIGKGNKPWVSLPKGKGIKLSIIEEQRKRDAAAQAA 262
>04_04_0040 + 22322839-22324173
Length = 444
Score = 33.1 bits (72), Expect = 0.48
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 714 TSRL--LR-HCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 872
TSRL LR H H HG + RH++ +R R H L A G P + AG
Sbjct: 25 TSRLKGLRVHLTHVDAHGNYSRHQLLRRAARRSHHRMSRLVARATGVPMTSSKAAG 80
>08_02_0509 - 17988458-17988892,17988986-17989147,17989542-17990378
Length = 477
Score = 31.1 bits (67), Expect = 1.9
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Frame = +3
Query: 705 PRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQG--HPPHHRRGAGQA 878
P +RL RH G HG R + E + GH H G P HH RG GQA
Sbjct: 15 PEAHARLPRHAPPAGGHGRGGRGQ-EGPIAIAAGHGRGHRGGGHGGPASPRHHLRGRGQA 73
>07_03_1757 +
29250163-29250349,29250612-29250813,29250898-29251008,
29251112-29251160,29251247-29251353,29251439-29251942,
29252486-29252614,29252865-29253161,29253274-29253720,
29253828-29253893,29254109-29254169,29254314-29254463,
29254555-29254689,29254791-29254818,29255430-29255479
Length = 840
Score = 29.9 bits (64), Expect = 4.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 794 MNTLFNLVAKVCPVESLMCTMSKEPGCLSRDTMVPTRPKLR 672
+N +F L V L+CT+ GC + +VP P++R
Sbjct: 213 LNAIFELFVWVNDSTVLVCTIPSSRGCPPKKPLVPFGPRIR 253
>05_02_0043 +
5964749-5966406,5966725-5966791,5967174-5967329,
5967782-5967865,5968020-5968073
Length = 672
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/62 (27%), Positives = 24/62 (38%)
Frame = +3
Query: 696 HRVPRETSRLLRHCAHQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQ 875
H R + H H G H H +H E +L +++ GH P+ R A Q
Sbjct: 313 HMYVRPSPNQDEHHGHTGHHIRHFLQLGWDYLHLTYKQEAANLGSSQNGHFPYRWRRASQ 372
Query: 876 AH 881
H
Sbjct: 373 YH 374
>12_02_0735 - 22636835-22639502,22639755-22640734
Length = 1215
Score = 29.5 bits (63), Expect = 5.9
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 806 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 711
PL NT+ +++A PVE L C +S + G L
Sbjct: 425 PLVTANTILSILAADYPVEKLACYLSDDGGAL 456
>11_06_0087 - 19919224-19922304
Length = 1026
Score = 29.5 bits (63), Expect = 5.9
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 509 DLRMFRTW*RMMAA-PSAIQTHLSKSTIPSS*TLQLRRL 622
DL R W +A PS HLS ++PSS T Q RRL
Sbjct: 208 DLSSARDWPLAIAMLPSLTALHLSSCSLPSSSTQQWRRL 246
>04_03_1015 - 21734381-21736534
Length = 717
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 473 STSCVKSSVWRPDLRMFRTW*RMMAAPSAIQTHLSKSTIPSS 598
S+S V S+V+ LR+ T R +AA I THL+ ST PS+
Sbjct: 38 SSSQVPSAVYASLLRL-ATSHRSLAAARRIATHLASSTAPST 78
>06_01_0083 - 659510-661267,661577-662384,662700-663646
Length = 1170
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -2
Query: 806 PLPIMNTLFNLVAKVCPVESLMCTMSKEPGCL 711
PL NT+ +++A PVE L C +S + G L
Sbjct: 414 PLVTANTILSILAADYPVEKLSCYVSDDGGAL 445
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,852,159
Number of Sequences: 37544
Number of extensions: 593573
Number of successful extensions: 1796
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1685
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1795
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3957481680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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