Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_K15
         (1275 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    27   0.35 
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    25   1.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              24   2.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    24   2.5  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    24   3.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   5.7  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   9.9  

>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 27.1 bits (57), Expect = 0.35
 Identities = 13/39 (33%), Positives = 23/39 (58%)
 Frame = -1

Query: 471 SLLRGDTVDCESALNXID*TKQFIRLLN*DNIHKSSRIS 355
           SLL+ +TV C+ A++ +      + +++ DNIH    IS
Sbjct: 381 SLLKENTVTCQEAMHMLKNADSQLLVISDDNIHIKGVIS 419


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 710 RDIPAPSTLCTSRTPRDTPSP 772
           RD+P  ST  T+   RDT +P
Sbjct: 137 RDLPGKSTTTTAEVKRDTINP 157


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 11/44 (25%), Positives = 16/44 (36%)
 Frame = +3

Query: 741  HQGLHGTHLRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAG 872
            H G  G  + H      H+R G + +     R    P    G+G
Sbjct: 1755 HSGTMGPPVGHPTNASAHSRSGSQSMPRQNGRYSRVPSQGGGSG 1798


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
 Frame = +3

Query: 741 HQGLHGT-HLRHEVEQRVHNRQGHEGVHL---AAARQGHPPHH 857
           H  +H T H  H      H++      H    AA + GH PHH
Sbjct: 423 HSHIHATPHHHHSHAATPHHQHSTPLAHSSYPAAIQIGHTPHH 465


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 710 RDIPAPSTLCTSRTPRDTPSP 772
           RD+P  ST  T    RDT +P
Sbjct: 137 RDLPGKSTTTTVEVKRDTINP 157


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +3

Query: 765 LRHEVEQRVHNRQGHEGVHLAAARQGHPPHHRRGAGQAHRXQGRR 899
           ++ E  QR H+ Q H     + A Q H   +++   Q  R Q R+
Sbjct: 133 IKQETLQRHHHLQNHHHHLQSTAVQDHHRPYQQQQQQQQRQQQRQ 177


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 744 DVHNVEGAGMSLAGHD 697
           DVH V GAG  +  HD
Sbjct: 110 DVHGVIGAGHWIGDHD 125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 252,844
Number of Sequences: 438
Number of extensions: 5485
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43702932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)