Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_K14
(1311 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0216 - 1700223-1700666,1700749-1700860,1701534-1701837,170... 40 0.004
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 36 0.093
04_04_1528 + 34172149-34172233,34172335-34172414,34172621-341726... 33 0.50
06_01_0288 - 2106113-2109055 33 0.66
01_06_1320 + 36272716-36273339,36274222-36275762,36276349-362764... 32 0.87
02_04_0211 + 20957553-20957828,20957944-20958258,20962094-209628... 31 2.0
08_02_0819 - 21529913-21530064,21531016-21531082,21531284-215313... 31 2.7
06_01_0289 - 2111768-2114377,2114970-2115025,2115272-2115323 30 4.6
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 30 4.6
10_01_0071 - 905696-909028 29 6.1
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 8.1
06_03_0609 + 22710442-22713502,22713596-22713948 29 8.1
>03_01_0216 -
1700223-1700666,1700749-1700860,1701534-1701837,
1702358-1702426,1702543-1702657,1702740-1702811,
1702918-1703016,1703148-1703219,1703394-1703465,
1704940-1705154,1705277-1705495,1705792-1707076,
1707270-1707398
Length = 1068
Score = 39.9 bits (89), Expect = 0.004
Identities = 25/87 (28%), Positives = 44/87 (50%)
Frame = +3
Query: 288 LTETETXYFGDLFLCCDEXSNGKIPILKATELFRSSNISNDILKQIMDISVSPNNCATLN 467
+T+++ + +F D +GKI +A LF S + +ILKQ+ D+S N+
Sbjct: 432 VTQSDIQKYTKVFADVDRDRDGKITGAEARTLFLSWRLPREILKQVWDLSDQDND----G 487
Query: 468 HMNRKQFYSALKLIAAHQTNIALKPDL 548
++ ++F AL L+ H+ L P L
Sbjct: 488 MLSLREFCIALYLMERHRAGTPLPPAL 514
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 35.5 bits (78), Expect = 0.093
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +3
Query: 312 FGDLFLCCDEXSNGKIPILKATELFRSSNISNDILKQIMDISVSPNNCATLNHMNRKQFY 491
F F D +G+I +A F++S + +L QI + N L R+ FY
Sbjct: 5 FDAYFRAADLDRDGRISGQEAVAFFKASALPQPVLAQIWTYA-DKNRTGFLG---REDFY 60
Query: 492 SALKLIAAHQTNIALKPDLLSTPI 563
+AL+L+ Q+ L PD++ + +
Sbjct: 61 NALRLVTVAQSGRELTPDIVRSAL 84
Score = 31.9 bits (69), Expect = 1.2
Identities = 21/88 (23%), Positives = 46/88 (52%)
Frame = +3
Query: 288 LTETETXYFGDLFLCCDEXSNGKIPILKATELFRSSNISNDILKQIMDISVSPNNCATLN 467
+T+ + + +F+ D +GKI +A LF S + ++L+++ D+S +
Sbjct: 376 ITQADVRKYMIVFIKVDRDRDGKITGEEARNLFLSWRLPRELLRKVWDLSDQDKD----G 431
Query: 468 HMNRKQFYSALKLIAAHQTNIALKPDLL 551
++ ++F +A+ L+ H+ L PD+L
Sbjct: 432 MLSFREFCTAVYLMERHREQRPL-PDVL 458
>04_04_1528 +
34172149-34172233,34172335-34172414,34172621-34172689,
34172780-34172837,34173296-34173357,34173441-34173554,
34173862-34173964,34174085-34174134,34174335-34174724,
34174918-34175244,34175360-34175689
Length = 555
Score = 33.1 bits (72), Expect = 0.50
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +3
Query: 324 FLCCDEXSNGKIPILKATELFRSSNISNDILKQIMDISVSPNNCATLNHMNRKQFYSALK 503
F D+ +G++ A + F SN+S LKQ+ I+ S ++ +F +A++
Sbjct: 23 FSLADDDGDGRVTGKDALKFFAMSNLSRPELKQVWAIADSKRQ----GYLGFSEFMTAMQ 78
Query: 504 LIAAHQTNIALKPDLLSTPIDLP--LPRFTWALNSEANSDL 620
L++ Q + D L+ + P LP NS++ +
Sbjct: 79 LVSLAQAGNEISQDTLAHAVRHPSELPASANWFNSKSGKKI 119
>06_01_0288 - 2106113-2109055
Length = 980
Score = 32.7 bits (71), Expect = 0.66
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = +3
Query: 543 DLLSTPIDLPLPRFTWALNSEANSDL--IQLSNSPKEHHISKRERNFVGNISAYEPIRLS 716
DL + ++ LPR+ W+L+S + DL QLS S ++ +GN+S+ ++L
Sbjct: 237 DLSNNELNSTLPRWIWSLHSLSYLDLSSCQLSGSVPDN---------IGNLSSLSFLQLL 287
Query: 717 SNLSDSDVPQTLS 755
N + ++PQ +S
Sbjct: 288 DNHLEGEIPQHMS 300
>01_06_1320 +
36272716-36273339,36274222-36275762,36276349-36276490,
36276622-36276729,36276814-36277026,36277113-36277223,
36278056-36278250,36278874-36279048,36279189-36279226
Length = 1048
Score = 32.3 bits (70), Expect = 0.87
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Frame = +3
Query: 612 SDLIQLSNSPKEHHISKRERNFV----GNISAYEPIRLSSNLSDSDVPQTLSHDGNEALS 779
SD +S PK ++K + + + + PI SN S SD+ + +S N S
Sbjct: 368 SDHQNISLDPKALQVNKNQHSLMLEADTDYLGIPPISQPSNPSFSDINKNVSGLANIRNS 427
Query: 780 TDSEIESETMSQRSGSRGRRVKTGSPWST-ASESPTP 887
T++ I+ QRS + R SP S+ AS +P
Sbjct: 428 TNTRIDGHAEMQRSSTLSTRSYQKSPTSSNASPGGSP 464
>02_04_0211 +
20957553-20957828,20957944-20958258,20962094-20962801,
20963362-20963609,20963758-20964101,20964200-20964236,
20964270-20964575,20965281-20965347,20965498-20965626
Length = 809
Score = 31.1 bits (67), Expect = 2.0
Identities = 24/90 (26%), Positives = 38/90 (42%)
Frame = +3
Query: 645 EHHISKRERNFVGNISAYEPIRLSSNLSDSDVPQTLSHDGNEALSTDSEIESETMSQRSG 824
EHH R R VGN S+ L L ++ D + + + S+ +
Sbjct: 215 EHHAVFRGRCVVGNRSSVPGTELEQQLQPANAELLDVEDLVDVPDAPQSPDPPSRSRPTR 274
Query: 825 SRGRRVKTGSPWSTASESPTPTNSVAERVH 914
RG+RV T + S S+ T ++S E +H
Sbjct: 275 GRGKRVATPASGSRGSKR-TRSDSTGEALH 303
>08_02_0819 -
21529913-21530064,21531016-21531082,21531284-21531373,
21531506-21531622,21532026-21532145,21532313-21533581
Length = 604
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +3
Query: 687 ISAYEPIRLSSNLSDSDVPQTLSHDGNEALSTDSEIESETMSQRSGSRGRRVKTGSPWST 866
++ +E R S SDV S + ++A + S S + RS S + + SP ST
Sbjct: 283 LATHESRREDKTESGSDVSSQTS-ENSKAATRPSRTLSSPVLHRSSSPNKVLSAASPAST 341
Query: 867 ASESPTPTNSVA 902
A +SP T A
Sbjct: 342 AFQSPLRTRPSA 353
>06_01_0289 - 2111768-2114377,2114970-2115025,2115272-2115323
Length = 905
Score = 29.9 bits (64), Expect = 4.6
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +3
Query: 576 PRFTWALNSEANSDLIQLSNSPKEHHISKRERNFVGNISAYEPIRLSSNLSDSDVPQTLS 755
P F L S+A ++I+LS + + + NF ISA + +S N+ + +P++L
Sbjct: 457 PHFPAWLKSQAKIEMIELSRAQIKSKLPDWLWNFSSTISALD---VSGNMINGKLPKSLK 513
Query: 756 H 758
H
Sbjct: 514 H 514
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 29.9 bits (64), Expect = 4.6
Identities = 27/94 (28%), Positives = 43/94 (45%)
Frame = +3
Query: 411 ILKQIMDISVSPNNCATLNHMNRKQFYSALKLIAAHQTNIALKPDLLSTPIDLPLPRFTW 590
+L I+D+ + + + + Q Y+ALK TN K + ++ P F
Sbjct: 3262 LLDSILDLCMHEISSSVEHSFTTNQLYTALK---TKLTNHVEK-QVYRYIMERIAPAFIL 3317
Query: 591 ALNSEANSDLIQLSNSPKEHHISKRERNFVGNIS 692
L+ E SDL+QLS +E KR+ VG I+
Sbjct: 3318 QLDKEI-SDLLQLSQGRRESGQPKRDSAAVGRIA 3350
>10_01_0071 - 905696-909028
Length = 1110
Score = 29.5 bits (63), Expect = 6.1
Identities = 21/80 (26%), Positives = 34/80 (42%)
Frame = +3
Query: 678 VGNISAYEPIRLSSNLSDSDVPQTLSHDGNEALSTDSEIESETMSQRSGSRGRRVKTGSP 857
+GN++A E + LS+N +P T++H N + +S S + SP
Sbjct: 303 LGNLTAVESLLLSNNFISGSLPDTIAHCKN--------LRVADLSSNKISGALPAELCSP 354
Query: 858 WSTASESPTPTNSVAERVHP 917
+ E P N VA + P
Sbjct: 355 GAALEELRLPDNLVAGTIPP 374
>12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 29.1 bits (62), Expect = 8.1
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Frame = +3
Query: 594 LNSEANSDLIQL-----SNSPKEHHISKRERNFVGNISAYEPIRLSSNLSDSDVPQ 746
LNSE + Q+ SN P ++ +N + N S EP+R S+ SD P+
Sbjct: 898 LNSEKRPRMDQVVRMLDSNEPIPQEERRQRQNHISNNSETEPLRGKSSSGKSDAPE 953
>06_03_0609 + 22710442-22713502,22713596-22713948
Length = 1137
Score = 29.1 bits (62), Expect = 8.1
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 678 VGNISAYEPIRLSSNLSDSDVPQTLSH 758
+GN+S+ +RLS N D +P++L H
Sbjct: 312 LGNLSSLLYLRLSQNCLDGSIPESLGH 338
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,410,914
Number of Sequences: 37544
Number of extensions: 460909
Number of successful extensions: 1454
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1452
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4097157504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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