Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_K14
(1311 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23523-2|AAC46559.2| 399|Caenorhabditis elegans Hypothetical pr... 36 0.048
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 32 1.0
AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical ... 30 4.2
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 29 5.5
AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical ... 29 5.5
AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical ... 29 5.5
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 9.6
>U23523-2|AAC46559.2| 399|Caenorhabditis elegans Hypothetical
protein F53A9.4 protein.
Length = 399
Score = 36.3 bits (80), Expect = 0.048
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Frame = +3
Query: 552 STPIDLPLPRFTWALNSEANSDLIQLSNSPKEHHISK-RERNFVGNISAYEPIRLSSNLS 728
S P+ P P+ + +S ++ D + +NS +E+ + RE N VGNIS
Sbjct: 5 SRPVPPP-PKRRISESSSSSDDELTGNNSFRENQQRRFRENNEVGNIS------------ 51
Query: 729 DSDVPQTLSHDGNEA---LSTDSEIESETMSQRSGSRGRRVKTG 851
DSD + SH +++ + TD E + E +Q S R RRV G
Sbjct: 52 DSDNDEVFSHQESQSVGFIETDEERQREEHAQNSNLRNRRVSYG 95
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 31.9 bits (69), Expect = 1.0
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = +3
Query: 717 SNLSDSDVPQTLSHDGNEALSTDSEIESETMSQRSGSRGRRVKTGSPWSTASESPTPTNS 896
S S VP T+S ++ +S + T S SGS G + GS S +S S T T+S
Sbjct: 1005 STESTPTVPSTVSGSTGSTVTGESTVSGSTASTSSGSTGSSTEAGSTVSGSSAS-TVTSS 1063
>AL132864-5|CAH60767.2| 281|Caenorhabditis elegans Hypothetical
protein Y53H1A.5 protein.
Length = 281
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3
Query: 537 KPDLLSTPIDLPLPRFTWALNSEANSDLIQLSNSPKEHHI 656
+P + P D L +TW N E+ + LI +SN E +
Sbjct: 67 QPTTVQLPPDCKLVEYTWQENGESRTVLIPMSNDSTEDDV 106
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 29.5 bits (63), Expect = 5.5
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 762 GNEALSTDSEIESETMSQRSGSRGRRVKTGSPWSTASESPTPTNSVAERVHPVWEHS 932
G +A D SE RSG GRRV+ + + AS++ + + +ER H +HS
Sbjct: 440 GRQAAPGDDVGSSE---DRSGQDGRRVQQQNASTPASDNSSSHDDSSERRHSTSDHS 493
>AF016433-5|AAN84877.1| 1039|Caenorhabditis elegans Hypothetical
protein C09H5.2b protein.
Length = 1039
Score = 29.5 bits (63), Expect = 5.5
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 627 LSNSPKEH--HISK-RERNFVGNISAYEPIRLSSNLSDSDVPQTLSHDGNEALSTDSEIE 797
LS+S EH HI++ ER F I EP + S L+ + Q L DG ALS I
Sbjct: 33 LSSSFVEHQMHIAQLSERFFHSKIDIVEP-KKSKGLTKQEAAQKLKTDGKNALSPPKTIS 91
Query: 798 S 800
+
Sbjct: 92 N 92
>AF016433-4|AAB65385.2| 1054|Caenorhabditis elegans Hypothetical
protein C09H5.2a protein.
Length = 1054
Score = 29.5 bits (63), Expect = 5.5
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 627 LSNSPKEH--HISK-RERNFVGNISAYEPIRLSSNLSDSDVPQTLSHDGNEALSTDSEIE 797
LS+S EH HI++ ER F I EP + S L+ + Q L DG ALS I
Sbjct: 33 LSSSFVEHQMHIAQLSERFFHSKIDIVEP-KKSKGLTKQEAAQKLKTDGKNALSPPKTIS 91
Query: 798 S 800
+
Sbjct: 92 N 92
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 29.1 bits (62), Expect = 7.3
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 618 LIQLSNSPKEHHISKRERNFVGNISAYEPI 707
+IQ S +P EH +K E +GN+ EPI
Sbjct: 77 VIQFSTTPGEHIPTKPEVKLIGNMHGNEPI 106
>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical
protein R09A8.1 protein.
Length = 1095
Score = 28.7 bits (61), Expect = 9.6
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = +3
Query: 426 MDISVSPNNCATLNHMNRKQFYSALKLIAAHQTNIALKPDLLSTPIDLPLPRFTWALNSE 605
+DIS PN+ T N + S + TN+ L+ ID + A + E
Sbjct: 210 VDISSHPNS-TTERFSNGSRNSSRNSAVLTFSTNVQSHAGLVRNDIDSN--SYAGARSIE 266
Query: 606 ANSDLIQLSNSPKEHHISKRERN-FVGNISAYEPIRLSSNLSDSDVPQTLSHDGNEALST 782
+SD ++ K IS +N F GN + +R SS+LSD +V +L GN ST
Sbjct: 267 -DSDFSKVDR--KMETISTETQNGFRGNSA----LRGSSSLSDMNVQSSLMVGGNR--ST 317
Query: 783 DSEIESE 803
D + ++
Sbjct: 318 DDRVNAQ 324
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,908,850
Number of Sequences: 27780
Number of extensions: 418492
Number of successful extensions: 1188
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3663150656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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