Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_K12
(1375 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.20
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.20
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 34 0.20
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 34 0.20
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 33 0.36
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.36
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.36
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.36
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 33 0.47
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 33 0.47
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 33 0.47
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 33 0.47
Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical pr... 33 0.62
Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical pr... 33 0.62
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.62
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.62
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.62
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.82
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.82
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.82
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.82
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 1.9
M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein. 31 1.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 31 1.9
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 2.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 3.3
U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protei... 30 4.4
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 5.8
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 29 5.8
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 5.8
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 29 5.8
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 5.8
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 29 5.8
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 5.8
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 29 7.7
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 29 7.7
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 7.7
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 29 7.7
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 7.7
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 7.7
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.20
Identities = 36/130 (27%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Frame = +2
Query: 878 PPPXTSIXKIDXQVR---GGXPRRDYXXSXXX-PLEXPXXPPXCSXPCRLPGXRX----R 1033
PPP S+ + + G PR S P P P P +PG
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 1034 XFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPXGXPXPGXXRXGXPPG* 1213
F P G G P PPG R G PP P+ P P P P R PP
Sbjct: 324 RFGPPGMGGMPPPPPPGM----RYPGGMPPPPP--PRYPSAGPGMYPPPPPSRPPAPPSG 377
Query: 1214 NXIXXPXXXP 1243
+ + P P
Sbjct: 378 HGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.20
Identities = 36/130 (27%), Positives = 43/130 (33%), Gaps = 8/130 (6%)
Frame = +2
Query: 878 PPPXTSIXKIDXQVR---GGXPRRDYXXSXXX-PLEXPXXPPXCSXPCRLPGXRX----R 1033
PPP S+ + + G PR S P P P P +PG
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 1034 XFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPXGXPXPGXXRXGXPPG* 1213
F P G G P PPG R G PP P+ P P P P R PP
Sbjct: 334 RFGPPGMGGMPPPPPPGM----RYPGGMPPPPP--PRYPSAGPGMYPPPPPSRPPAPPSG 387
Query: 1214 NXIXXPXXXP 1243
+ + P P
Sbjct: 388 HGMIPPPPPP 397
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 34.3 bits (75), Expect = 0.20
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 1040 PPSGKXGAXPXXPPGXVSXXRGXG--XSPPXXGXGPKXPXXXPXGXPXPGXXRXGXPPG 1210
PP G P PPG + G G PP G P G P PG G P G
Sbjct: 155 PPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 213
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/82 (32%), Positives = 28/82 (34%)
Frame = -2
Query: 1209 PGGXPXRXXPGXGXPXGXXXGXXGPXPXXGGXXPXPRXWETXPGGXMGXAPXXPEGGKXR 1030
PGG P P P G GP P GG PR P G MG P GG
Sbjct: 130 PGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGG-DPR----GPPGGMGGPPG--HGGMGG 182
Query: 1029 XRXPGXRQGXEQXGGXXGXSRG 964
G + G GG G G
Sbjct: 183 PPGHGGQGGPPGHGGMGGPPPG 204
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 34.3 bits (75), Expect = 0.20
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = +2
Query: 1040 PPSGKXGAXPXXPPGXVSXXRGXG--XSPPXXGXGPKXPXXXPXGXPXPGXXRXGXPPG 1210
PP G P PPG + G G PP G P G P PG G P G
Sbjct: 435 PPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 493
Score = 31.9 bits (69), Expect = 1.1
Identities = 27/82 (32%), Positives = 28/82 (34%)
Frame = -2
Query: 1209 PGGXPXRXXPGXGXPXGXXXGXXGPXPXXGGXXPXPRXWETXPGGXMGXAPXXPEGGKXR 1030
PGG P P P G GP P GG PR P G MG P GG
Sbjct: 410 PGGPPPFGQPFQQAPQGMFNVPTGPPPLMGGGG-DPR----GPPGGMGGPPG--HGGMGG 462
Query: 1029 XRXPGXRQGXEQXGGXXGXSRG 964
G + G GG G G
Sbjct: 463 PPGHGGQGGPPGHGGMGGPPPG 484
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 33.5 bits (73), Expect = 0.36
Identities = 22/78 (28%), Positives = 25/78 (32%), Gaps = 4/78 (5%)
Frame = +2
Query: 989 PXCSXPCRLPGXRXRXFPPSG----KXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXX 1156
P S P P PP+ + P PPG + G P G GP
Sbjct: 684 PTSSTPSDTPAPSTSVPPPTSVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMR 743
Query: 1157 XPXGXPXPGXXRXGXPPG 1210
P G P G PPG
Sbjct: 744 PPAGFAPPPGAPYGYPPG 761
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.5 bits (73), Expect = 0.36
Identities = 23/86 (26%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Frame = +1
Query: 1075 PPRXGFPXPGXXXXPPXXGXGXXXPPXXPXRXXXXGXXPXWXPPR-VKXNXXPXXXXPGX 1251
PP P P PP G G PP R P PP P PG
Sbjct: 307 PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK 366
Query: 1252 XGFXXXGXXGGXXKXXXGGPXXXPXK 1329
G GGP P K
Sbjct: 367 SSEESSESREGPRGGPRGGPRGGPRK 392
Score = 31.5 bits (68), Expect = 1.4
Identities = 32/121 (26%), Positives = 35/121 (28%), Gaps = 11/121 (9%)
Frame = +2
Query: 878 PPPXTSIXKIDXQVRGGXPRRDYXXSXXXPLEXPXXPPXCSXPCRLPGXRXRXFPPSGKX 1057
PPP G P S P PP P P PP +
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGGSPPPPRA 294
Query: 1058 GAXPXXPPGXVSXXRG------XGXSPPXXGXG-----PKXPXXXPXGXPXPGXXRXGXP 1204
G+ P PP S G G SPP G G P+ P P G G P
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
Query: 1205 P 1207
P
Sbjct: 355 P 355
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -2
Query: 1209 PGGXPXRXXPGXGXPXGXXXGXXGPXPXXGGXXPXPRXWETXPGGXMGXAPXXPEGG 1039
P G P P G P G P P G P P + P G P P GG
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGG 287
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.5 bits (73), Expect = 0.36
Identities = 23/86 (26%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Frame = +1
Query: 1075 PPRXGFPXPGXXXXPPXXGXGXXXPPXXPXRXXXXGXXPXWXPPR-VKXNXXPXXXXPGX 1251
PP P P PP G G PP R P PP P PG
Sbjct: 328 PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK 387
Query: 1252 XGFXXXGXXGGXXKXXXGGPXXXPXK 1329
G GGP P K
Sbjct: 388 SSEESSESREGPRGGPRGGPRGGPRK 413
Score = 31.5 bits (68), Expect = 1.4
Identities = 32/121 (26%), Positives = 35/121 (28%), Gaps = 11/121 (9%)
Frame = +2
Query: 878 PPPXTSIXKIDXQVRGGXPRRDYXXSXXXPLEXPXXPPXCSXPCRLPGXRXRXFPPSGKX 1057
PPP G P S P PP P P PP +
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGGSPPPPRA 315
Query: 1058 GAXPXXPPGXVSXXRG------XGXSPPXXGXG-----PKXPXXXPXGXPXPGXXRXGXP 1204
G+ P PP S G G SPP G G P+ P P G G P
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
Query: 1205 P 1207
P
Sbjct: 376 P 376
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -2
Query: 1209 PGGXPXRXXPGXGXPXGXXXGXXGPXPXXGGXXPXPRXWETXPGGXMGXAPXXPEGG 1039
P G P P G P G P P G P P + P G P P GG
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGG 308
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.5 bits (73), Expect = 0.36
Identities = 23/86 (26%), Positives = 23/86 (26%), Gaps = 1/86 (1%)
Frame = +1
Query: 1075 PPRXGFPXPGXXXXPPXXGXGXXXPPXXPXRXXXXGXXPXWXPPR-VKXNXXPXXXXPGX 1251
PP P P PP G G PP R P PP P PG
Sbjct: 313 PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRPPRGGPGK 372
Query: 1252 XGFXXXGXXGGXXKXXXGGPXXXPXK 1329
G GGP P K
Sbjct: 373 SSEESSESREGPRGGPRGGPRGGPRK 398
Score = 31.5 bits (68), Expect = 1.4
Identities = 32/121 (26%), Positives = 35/121 (28%), Gaps = 11/121 (9%)
Frame = +2
Query: 878 PPPXTSIXKIDXQVRGGXPRRDYXXSXXXPLEXPXXPPXCSXPCRLPGXRXRXFPPSGKX 1057
PPP G P S P PP P P PP +
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSP---PPPPAGGSPPPPRA 300
Query: 1058 GAXPXXPPGXVSXXRG------XGXSPPXXGXG-----PKXPXXXPXGXPXPGXXRXGXP 1204
G+ P PP S G G SPP G G P+ P P G G P
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
Query: 1205 P 1207
P
Sbjct: 361 P 361
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = -2
Query: 1209 PGGXPXRXXPGXGXPXGXXXGXXGPXPXXGGXXPXPRXWETXPGGXMGXAPXXPEGG 1039
P G P P G P G P P G P P + P G P P GG
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGG 293
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical protein
C02C6.1b protein.
Length = 838
Score = 33.1 bits (72), Expect = 0.47
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -2
Query: 1131 PXXGGXXPXPRXWETXPGGXMGXAPXXPEGGKXRXRXPGXRQGXEQXGGXXG 976
P G P PR PGG AP P GG PG R GG G
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQ--APMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical protein
C02C6.1a protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.47
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -2
Query: 1131 PXXGGXXPXPRXWETXPGGXMGXAPXXPEGGKXRXRXPGXRQGXEQXGGXXG 976
P G P PR PGG AP P GG PG R GG G
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQ--APMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = +1
Query: 1075 PPRXG--FPXPGXXXXPPXX--GXGXXXPPXXPXRXXXXGXXPXWXPPR 1209
PPR G P P PP G G PP P R G P PPR
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPPR 830
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 33.1 bits (72), Expect = 0.47
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -2
Query: 1131 PXXGGXXPXPRXWETXPGGXMGXAPXXPEGGKXRXRXPGXRQGXEQXGGXXG 976
P G P PR PGG AP P GG PG R GG G
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQ--APMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 4/49 (8%)
Frame = +1
Query: 1075 PPRXG--FPXPGXXXXPPXX--GXGXXXPPXXPXRXXXXGXXPXWXPPR 1209
PPR G P P PP G G PP P R G P PPR
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPPNMAPPR 830
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 33.1 bits (72), Expect = 0.47
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = -2
Query: 1131 PXXGGXXPXPRXWETXPGGXMGXAPXXPEGGKXRXRXPGXRQGXEQXGGXXG 976
P G P PR PGG AP P GG PG R GG G
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQ--APMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z73102-2|CAB63428.1| 341|Caenorhabditis elegans Hypothetical protein
B0035.1b protein.
Length = 341
Score = 32.7 bits (71), Expect = 0.62
Identities = 23/77 (29%), Positives = 24/77 (31%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXX 1156
P PP S +P PP G GA P P G PP G P
Sbjct: 130 PSGPPPPSMAYGMPPMPSGMMPPRGMPGAYP-PPRGYPPAPAPGVYMPPPGMPGAYPPPR 188
Query: 1157 XPXGXPXPGXXRXGXPP 1207
P G PG PP
Sbjct: 189 MPIGHGPPGGPPMPGPP 205
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -2
Query: 1209 PGGXPXRXXPGXGXPXGXXXGXXGPXPXXGGXXPXPR--XWETXPGGXMGXAPXXPEGGK 1036
P G P P G P G P P G P PR PGG P P+ +
Sbjct: 152 PRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGP--PMPGPPQRSR 209
Query: 1035 XRXRXPGXRQGXEQXG 988
G R G G
Sbjct: 210 FDQPDGGDRWGPPMRG 225
>Z73102-1|CAA97419.1| 298|Caenorhabditis elegans Hypothetical protein
B0035.1a protein.
Length = 298
Score = 32.7 bits (71), Expect = 0.62
Identities = 23/77 (29%), Positives = 24/77 (31%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXX 1156
P PP S +P PP G GA P P G PP G P
Sbjct: 130 PSGPPPPSMAYGMPPMPSGMMPPRGMPGAYP-PPRGYPPAPAPGVYMPPPGMPGAYPPPR 188
Query: 1157 XPXGXPXPGXXRXGXPP 1207
P G PG PP
Sbjct: 189 MPIGHGPPGGPPMPGPP 205
Score = 29.5 bits (63), Expect = 5.8
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
Frame = -2
Query: 1209 PGGXPXRXXPGXGXPXGXXXGXXGPXPXXGGXXPXPR--XWETXPGGXMGXAPXXPEGGK 1036
P G P P G P G P P G P PR PGG P P+ +
Sbjct: 152 PRGMPGAYPPPRGYPPAPAPGVYMPPPGMPGAYPPPRMPIGHGPPGGP--PMPGPPQRSR 209
Query: 1035 XRXRXPGXRQGXEQXG 988
G R G G
Sbjct: 210 FDQPDGGDRWGPPMRG 225
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.62
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = +2
Query: 986 PPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPX 1165
PP P PG PP G P PPG + G PP G P P
Sbjct: 707 PPITGGPPPPPG-----LPPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 1166 GXPXPGXXRXGXPP 1207
P PG PP
Sbjct: 761 PPPPPGGCPPPPPP 774
Score = 32.7 bits (71), Expect = 0.62
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 1056 GGPXPXPPPXXFPXXGXXXXPPQXGXGXXXPPXXXXXGXLXREXXXXXXPPG 1211
GGP P PPP P PP G PP + PPG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.62
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = +2
Query: 986 PPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPX 1165
PP P PG PP G P PPG + G PP G P P
Sbjct: 707 PPITGGPPPPPG-----LPPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 1166 GXPXPGXXRXGXPP 1207
P PG PP
Sbjct: 761 PPPPPGGCPPPPPP 774
Score = 32.7 bits (71), Expect = 0.62
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 1056 GGPXPXPPPXXFPXXGXXXXPPQXGXGXXXPPXXXXXGXLXREXXXXXXPPG 1211
GGP P PPP P PP G PP + PPG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.62
Identities = 23/74 (31%), Positives = 24/74 (32%)
Frame = +2
Query: 986 PPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPX 1165
PP P PG PP G P PPG + G PP G P P
Sbjct: 290 PPITGGPPPPPG-----LPPI-TGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 1166 GXPXPGXXRXGXPP 1207
P PG PP
Sbjct: 344 PPPPPGGCPPPPPP 357
Score = 32.7 bits (71), Expect = 0.62
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 1056 GGPXPXPPPXXFPXXGXXXXPPQXGXGXXXPPXXXXXGXLXREXXXXXXPPG 1211
GGP P PPP P PP G PP + PPG
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXX 1156
P P + P PG P+G G P PPG G P GP P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDG--APGAPGGPGEPGA 211
Query: 1157 XPXGXPXPGXXRXGXPPG 1210
G PG PPG
Sbjct: 212 SEQG--GPGEPGPAGPPG 227
Score = 29.1 bits (62), Expect = 7.7
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPSGKXGAX-PXXPPGXVSXXRGXGXSPPXXGXGPKX-- 1147
P P C PC PG P+G G P PG + G G + P GP
Sbjct: 141 PVTQPPCQ-PC--PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Query: 1148 -PXXXPXGXPXPGXXRXGXP 1204
P G PG G P
Sbjct: 198 GAPGAPGGPGEPGASEQGGP 217
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXX 1156
P P + P PG P+G G P PPG G P GP P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDG--APGAPGGPGEPGA 211
Query: 1157 XPXGXPXPGXXRXGXPPG 1210
G PG PPG
Sbjct: 212 SEQG--GPGEPGPAGPPG 227
Score = 29.1 bits (62), Expect = 7.7
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPSGKXGAX-PXXPPGXVSXXRGXGXSPPXXGXGPKX-- 1147
P P C PC PG P+G G P PG + G G + P GP
Sbjct: 141 PVTQPPCQ-PC--PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Query: 1148 -PXXXPXGXPXPGXXRXGXP 1204
P G PG G P
Sbjct: 198 GAPGAPGGPGEPGASEQGGP 217
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXX 1156
P P + P PG P+G G P PPG G P GP P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDG--APGAPGGPGEPGA 211
Query: 1157 XPXGXPXPGXXRXGXPPG 1210
G PG PPG
Sbjct: 212 SEQG--GPGEPGPAGPPG 227
Score = 29.1 bits (62), Expect = 7.7
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPSGKXGAX-PXXPPGXVSXXRGXGXSPPXXGXGPKX-- 1147
P P C PC PG P+G G P PG + G G + P GP
Sbjct: 141 PVTQPPCQ-PC--PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Query: 1148 -PXXXPXGXPXPGXXRXGXP 1204
P G PG G P
Sbjct: 198 GAPGAPGGPGEPGASEQGGP 217
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 32.3 bits (70), Expect = 0.82
Identities = 23/78 (29%), Positives = 25/78 (32%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXX 1156
P P + P PG P+G G P PPG G P GP P
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDG--APGAPGGPGEPGA 211
Query: 1157 XPXGXPXPGXXRXGXPPG 1210
G PG PPG
Sbjct: 212 SEQG--GPGEPGPAGPPG 227
Score = 29.1 bits (62), Expect = 7.7
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 4/80 (5%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPSGKXGAX-PXXPPGXVSXXRGXGXSPPXXGXGPKX-- 1147
P P C PC PG P+G G P PG + G G + P GP
Sbjct: 141 PVTQPPCQ-PC--PGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGND 197
Query: 1148 -PXXXPXGXPXPGXXRXGXP 1204
P G PG G P
Sbjct: 198 GAPGAPGGPGEPGASEQGGP 217
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein 20
protein.
Length = 288
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +2
Query: 1109 GXSPPXXGXGPKXPXXXPXGXPXPGXXRXGXPPG 1210
G + P G GPK P P G PG G P G
Sbjct: 147 GPAGPAGGPGPKGPPGPPGGHGEPGPAGRGGPRG 180
>M25479-1|AAA27993.1| 282|Caenorhabditis elegans collagen protein.
Length = 282
Score = 31.1 bits (67), Expect = 1.9
Identities = 30/105 (28%), Positives = 32/105 (30%), Gaps = 6/105 (5%)
Frame = +2
Query: 986 PPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXS-----PPXXGX-GPKX 1147
PP C P R P P+G G PPG G G P G GP
Sbjct: 139 PPGCPGP-RGPSGLVGPAGPAGDQGRH--GPPGPTGGQGGPGEQGDAGRPGAAGCPGPPG 195
Query: 1148 PXXXPXGXPXPGXXRXGXPPG*NXIXXPXXXPXGXXXXXXRGFXG 1282
P P PG PPG P P G +G G
Sbjct: 196 PRGEPGTEYRPGQAGRAGPPGPRGPPGPEGNPGGAGEDGNQGPVG 240
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.1 bits (67), Expect = 1.9
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +2
Query: 1040 PPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPXGXPXPGXXRXGXPPG*NX 1219
PP A P PG G PP GP P PG PG N
Sbjct: 185 PPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNT 244
Query: 1220 IXXP 1231
+ P
Sbjct: 245 VNSP 248
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical protein
C53B4.5 protein.
Length = 289
Score = 30.7 bits (66), Expect = 2.5
Identities = 27/82 (32%), Positives = 27/82 (32%), Gaps = 4/82 (4%)
Frame = +2
Query: 977 PXXPPXCSXPCRL--PGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXP 1150
P PP C PC PG P K P PPG G P GP P
Sbjct: 129 PITPPPCK-PCPEGPPGPAGPPGPQGNKGPLGPPGPPGPEGPNGTAGNKGP---AGPPGP 184
Query: 1151 XXXPXGXPXPG-XXRXGXP-PG 1210
P PG R G P PG
Sbjct: 185 GGKPGPAGPPGENGRNGEPQPG 206
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 3.3
Identities = 29/101 (28%), Positives = 31/101 (30%), Gaps = 4/101 (3%)
Frame = -3
Query: 1307 PPXXNFXXPPKXPXXXXPXNPGXXXXGXKXXFTRGGXXXGXFPXKXXRXGXXGGXXX--P 1134
PP N PP P P G +G G P K G P
Sbjct: 699 PPMFNLNAPPPPGIPGYPPAPPPPGVGPPPP--QGIPPMGFDPNKPPPPMFQQGFNAGAP 756
Query: 1133 XPXLG-GXXXXPGXGKPXRGGXWXXPPXXP-KGGXGGXGXP 1017
P G G P RGG PP +GG GG G P
Sbjct: 757 PPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGP 797
>U55373-5|AAC25888.1| 289|Caenorhabditis elegans Collagen protein
140, isoform a protein.
Length = 289
Score = 29.9 bits (64), Expect = 4.4
Identities = 20/56 (35%), Positives = 22/56 (39%)
Frame = +2
Query: 1043 PSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPXGXPXPGXXRXGXPPG 1210
P G+ G P PPG V G + P G K P P G PG G PG
Sbjct: 146 PPGRPG--PRGPPGEV------GPAGPSGDNGRKGPPGPPGGPGGPGEGGDGGRPG 193
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -2
Query: 1137 PXPXXGGXXPXPRXWETXPGGXMGXAPXXPEGGKXRXRXPGXRQGXEQXGG 985
P P P P + PGG G P P G PG Q GG
Sbjct: 171 PGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGG 221
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/51 (31%), Positives = 17/51 (33%)
Frame = -2
Query: 1137 PXPXXGGXXPXPRXWETXPGGXMGXAPXXPEGGKXRXRXPGXRQGXEQXGG 985
P P P P + PGG G P P G PG Q GG
Sbjct: 171 PGPAGPAGPPGPPGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGG 221
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical protein
F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 5.8
Identities = 26/83 (31%), Positives = 29/83 (34%), Gaps = 5/83 (6%)
Frame = +2
Query: 977 PXXPPXCSXPCRLPGXRXRXFPPS--GKXGAXPXXPPGXV--SXXRGXGXSPPXXGXGPK 1144
P PP PG + S G+ G P PPG + G S G GPK
Sbjct: 205 PAGPPGNDGQPGQPGGPGQDGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGPK 264
Query: 1145 XPXXXPXGXP-XPGXXRXGXPPG 1210
P P G P G PPG
Sbjct: 265 GP-PGPAGQPGSDGNPGTAGPPG 286
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein 34
protein.
Length = 299
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 1043 PSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPXGXPXPGXXRXGXPPG 1210
P G+ G P PPG G GP P P PG PPG
Sbjct: 220 PPGEAG--PQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGPPG 273
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 5.8
Identities = 26/82 (31%), Positives = 26/82 (31%), Gaps = 5/82 (6%)
Frame = -2
Query: 1206 GGXPXRXXPGXGXPXGXXXGXXGP--XPXXGGXXPXPRXWETXP-GGXMGXAPXXPEGGK 1036
GG P P P G G GP P GG E P GG G P P G
Sbjct: 164 GGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTG--PFDPSGAP 221
Query: 1035 XRXRXPG--XRQGXEQXGGXXG 976
PG G GG G
Sbjct: 222 PSGGPPGPFNPSGAPPSGGPPG 243
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 1043 PSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPXGXPXPGXXRXGXPPG 1210
P G+ G P PPG G GP P P PG PPG
Sbjct: 219 PPGEAG--PQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGPPG 272
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 1048 GXXGGXXHXPPRXGFPXPGXXXXPPXXGXGXXXPPXXPXRXXXXGXXPXWXPP 1206
G G + PP G P PP G G PP P G P PP
Sbjct: 402 GPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPP-PPGGPGAYGPPPTGFPP 453
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular collagen
RAM-4 protein.
Length = 299
Score = 29.5 bits (63), Expect = 5.8
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 1043 PSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPXGXPXPGXXRXGXPPG 1210
P G+ G P PPG G GP P P PG PPG
Sbjct: 220 PPGEAG--PQGPPGSPGQPGADGSPGQPGPKGPNGPDGQPGADGNPGAPGPAGPPG 273
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/58 (31%), Positives = 20/58 (34%)
Frame = -2
Query: 1149 GXXGPXPXXGGXXPXPRXWETXPGGXMGXAPXXPEGGKXRXRXPGXRQGXEQXGGXXG 976
G P P P P PGG G P P G R PG + G + G G
Sbjct: 251 GSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPG-QPGPDGQPGAPG 307
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical protein
F33A8.9 protein.
Length = 346
Score = 29.1 bits (62), Expect = 7.7
Identities = 20/69 (28%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +2
Query: 1016 PGXRXRXFPPSGKXGAXPXXPPG--XVSXXRGXGXSPPXXGXGPKXPXXXPXGXPXPGXX 1189
PG PP G P PPG + G P GP P P G
Sbjct: 237 PGPPGPPGPPGNPGGIGPRGPPGDPGIMTQDSRGVEGPSGPSGPPGPMGFPGPKGIDGFS 296
Query: 1190 RXG--XPPG 1210
+ G PPG
Sbjct: 297 QVGSMGPPG 305
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical protein
F14F7.1 protein.
Length = 305
Score = 29.1 bits (62), Expect = 7.7
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = -3
Query: 1160 GXXGGXXXPXPXLGGXXXXPGX-GKPXRGGXWXXPPXXPKGGXGGXGXP 1017
G GG P P G PG G P G P PKG G G P
Sbjct: 215 GYGGGVGAPGP--AGPRGAPGPAGHPGSSGGGRPGPAGPKGAPGQPGRP 261
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical protein
C15A11.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 7.7
Identities = 20/66 (30%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +2
Query: 1019 GXRXRXFP-PSGKXGAX-PXXPPGXVSXXRGXGXSPPXXGXGPKXPXXXPXGXPXPGXXR 1192
G R R P PSG G+ P PG G + P GP P PG
Sbjct: 199 GQRGRGLPGPSGAPGSQGPPGAPGQPGSGNAPGPAGPPGPAGPNGQPGHPGQDGQPGAPG 258
Query: 1193 XGXPPG 1210
PG
Sbjct: 259 NDGTPG 264
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
F12F6.6 protein.
Length = 1126
Score = 29.1 bits (62), Expect = 7.7
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 1/76 (1%)
Frame = +2
Query: 986 PPXCSXPCRLPGXRXRXFPPSGKXGAXPXXPPGXVSXXR-GXGXSPPXXGXGPKXPXXXP 1162
PP S P PG P G G PPG G S GP P P
Sbjct: 270 PPGASAPVA-PGMPGAFPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYP 328
Query: 1163 XGXPXPGXXRXGXPPG 1210
G P + G P G
Sbjct: 329 SGGPGMPGMQGGYPGG 344
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter than
wild-typeprotein 3 protein.
Length = 302
Score = 29.1 bits (62), Expect = 7.7
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Frame = +2
Query: 986 PPXCSXPCRLPGXRXRXFPPS--GKXG-AXPXXPPGXVSXXRGXGXSPPXXGXGPKXPXX 1156
PP P PG + PP G+ G A P PG G P G GP+ P
Sbjct: 223 PPGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPHGGTGPRGPPG 282
Query: 1157 XP 1162
P
Sbjct: 283 QP 284
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 7.7
Identities = 23/80 (28%), Positives = 23/80 (28%), Gaps = 2/80 (2%)
Frame = +2
Query: 977 PXXPPXCSXPCRL--PGXRXRXFPPSGKXGAXPXXPPGXVSXXRGXGXSPPXXGXGPKXP 1150
P PP C PC PG P K P PPG G P GP
Sbjct: 131 PLTPPPCK-PCPEGPPGPAGPPGPDGNKGPLGPPGPPGPEGPNGEPGNKGPAGPPGP-GG 188
Query: 1151 XXXPXGXPXPGXXRXGXPPG 1210
P G P PG
Sbjct: 189 KPGPAGPPGENGNNGEPQPG 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,940,299
Number of Sequences: 27780
Number of extensions: 345543
Number of successful extensions: 1227
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3881690894
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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