Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_K11
(1276 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 79 5e-15
Z93383-3|CAB07625.1| 309|Caenorhabditis elegans Hypothetical pr... 30 3.1
Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical pr... 29 5.3
Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical pr... 29 5.3
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 29 7.0
AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical... 29 9.3
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 29 9.3
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 29 9.3
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 79.4 bits (187), Expect = 5e-15
Identities = 53/144 (36%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Frame = +2
Query: 146 SLKDLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLFDGIEKFDS 322
++ +LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS
Sbjct: 3 AVTELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDS 59
Query: 323 SQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXX 502
++L T +EK LP D + EK H L D + +F +K T T EKN L
Sbjct: 60 TKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVL----PSPT 115
Query: 503 XXXXNKFLNGIENFDPTKLKHTET 574
K L +FD + L H ET
Sbjct: 116 DVAREKTLQMAASFDKSALHHVET 139
Score = 71.7 bits (168), Expect = 1e-12
Identities = 39/100 (39%), Positives = 52/100 (52%)
Frame = +2
Query: 326 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXX 505
+LK ET EKN LP K+ VA EK H + +EHFD T++ T +EK L
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82
Query: 506 XXXNKFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKS 625
+ + I NF LK TET EKN LP+ + +EK+
Sbjct: 83 KQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKT 122
Score = 39.9 bits (89), Expect = 0.004
Identities = 28/82 (34%), Positives = 38/82 (46%)
Frame = +2
Query: 377 VVAAEKAHQNLLDGVEHFDKTQMKHTTTEEKNPLXXXXXXXXXXXXNKFLNGIENFDPTK 556
V K +Q L V + ++K T EKN L + ++ IE+FD TK
Sbjct: 4 VTELPKMNQELAGAVR--EGLELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTK 61
Query: 557 LKHTETCEKNPLPTKDVIEQEK 622
L T EK LP+ D I+QEK
Sbjct: 62 LHSTPVKEKIVLPSADDIKQEK 83
>Z93383-3|CAB07625.1| 309|Caenorhabditis elegans Hypothetical
protein F54B8.3 protein.
Length = 309
Score = 30.3 bits (65), Expect = 3.1
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Frame = -1
Query: 571 FRVLQLSGIEVLDAVQEFVLFLLRFDSFDRGQWILFFRR-----RVLHLSLVEVFNSVQE 407
F V+ L+ ++V A++ F ++ DR Q I +F+R LH+ VE++NS +
Sbjct: 99 FLVIALNDLKV--ALKHVSCFAYVDNTLDRYQNITYFKRFLKSEETLHVEEVEIWNSYVD 156
Query: 406 VLVGFLRC 383
++ LRC
Sbjct: 157 DVMTILRC 164
>Z46343-6|CAL36520.1| 366|Caenorhabditis elegans Hypothetical
protein T23F11.3b protein.
Length = 366
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -3
Query: 386 LRQRLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQWRRL 261
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>Z46343-5|CAA86458.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.3a protein.
Length = 356
Score = 29.5 bits (63), Expect = 5.3
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -3
Query: 386 LRQRLCPEAGSSPESRCASAGSNQTSQCRRIKTSGSSQWRRL 261
+ +R P++GSS E+ + + + S R + TS SSQ+ ++
Sbjct: 70 MSRRSLPKSGSSSEATSSKSSDSLVSFTRNVSTSTSSQYGKI 111
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 29.1 bits (62), Expect = 7.0
Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 2/98 (2%)
Frame = +1
Query: 322 EPAEAH-RDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSY- 495
+P E R E Q+R GE P + R + D+ D+ +E P R +
Sbjct: 141 DPTEVKDRFDKEREGRKQQRGDDGEEEDHPKSQRGIQRSNEDDRKDE--EEEERPRRPHQ 198
Query: 496 RSGEGKEQIPERHRELRSH*AEAHGNVRKEPAPHKGRH 609
R G+ E E ++ R HG +EP+ + H
Sbjct: 199 RRGDSYEDEEEDRKKYRPR----HGEEEEEPSREREHH 232
>AF100307-11|AAC68929.1| 304|Caenorhabditis elegans Hypothetical
protein T12B5.3 protein.
Length = 304
Score = 28.7 bits (61), Expect = 9.3
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 723 ITSFIFVFVQWQPCLGNGGVQQPRILFKS*RQVAPYANKQRVDAINRSNTDN 878
ITSFI F++ + C+ + R+LF + P+ N + ++ I S TDN
Sbjct: 131 ITSFIN-FLKAKDCIHVKEIHFNRLLFDDILSILPFFNAKVLENIKLSETDN 181
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 28.7 bits (61), Expect = 9.3
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 3/94 (3%)
Frame = +1
Query: 352 EEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 531
+ P +RR + E + RS R+ HD RK + + RS RS K ++
Sbjct: 7 KSPEKVERRRSTQEDSEKDKKRSRDDRKTEKRTHDRDRKRNRSRSRS-RSRSPKRSRRDK 65
Query: 532 HRELRSH*AEAHGNVR--KEPAPHKGRH-*AREI 624
E + E G +R PAP K R ARE+
Sbjct: 66 KEEKQEQ-EEEDGEIRDTTPPAPEKPRQLTAREL 98
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 331 EAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKE 471
E + E+ + R E PEPL R D DE DDG ++
Sbjct: 2493 EDEEEEAEDDDQDEDDVRHVEQNPEPLARRLFEEDDDDEEDDDGDED 2539
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,688,950
Number of Sequences: 27780
Number of extensions: 496884
Number of successful extensions: 1541
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1534
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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