Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_K08
(1327 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 185 2e-45
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 118 3e-25
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 91 4e-17
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 74 1e-11
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 59 2e-07
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 56 3e-06
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 54 6e-06
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 46 0.002
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 44 0.009
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.036
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 41 0.063
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 40 0.11
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.19
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 35 4.1
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 185 bits (451), Expect = 2e-45
Identities = 90/120 (75%), Positives = 92/120 (76%)
Frame = +1
Query: 523 SKRPRTVKRPRCWRFSIGSAPLTSITKIDAQVXGGXTRQDYKDTRRXPLEAPSCALLFRP 702
SK+ T R RFSIGSAPLTSITKIDAQV GG TRQDYKDTRR PLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 703 CRLPDTCPPFSLREAWRXLIAHAVGISXRCXSXAPSWAVCTNXXXXXXXXXXXVXIVXNP 882
CRLPDTCPPFSLREAWR LIAHAVGIS RC S APSWAVCTN V IV +P
Sbjct: 62 CRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSP 121
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 118 bits (285), Expect = 3e-25
Identities = 69/120 (57%), Positives = 75/120 (62%)
Frame = +1
Query: 355 RGEAVCVLGALPXPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 534
R +C G +P PRSLTR ARSFGCGERY+LT G E T +K +
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT--RKTLSKE 75
Query: 535 RTVKRPRCWRFSIGSAPLTSITKIDAQVXGGXTRQDYKDTRRXPLEAPSCALLFRPCRLP 714
RPR RFSIGSAPLTSI K DAQ+ GG TRQDYKD RR PL APSCALLF P LP
Sbjct: 76 EI--RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 91.5 bits (217), Expect = 4e-17
Identities = 44/56 (78%), Positives = 46/56 (82%)
Frame = +1
Query: 535 RTVKRPRCWRFSIGSAPLTSITKIDAQVXGGXTRQDYKDTRRXPLEAPSCALLFRP 702
R V+ PR RFSIGSAPLTSITK DAQ+ GG TRQDYKDTRR PL APSCALLF P
Sbjct: 42 REVRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 73.7 bits (173), Expect = 1e-11
Identities = 34/37 (91%), Positives = 35/37 (94%)
Frame = +3
Query: 681 VRSPVPTLPLTGYLSAFLPSGSVALXHSSRCRYLXSV 791
+RSPVPTLPLTGYLSAFLPSGSVAL HSSRCRYL SV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 59.3 bits (137), Expect = 2e-07
Identities = 32/74 (43%), Positives = 39/74 (52%)
Frame = -2
Query: 885 GWIXDDXYXXXXXXXXXXXXRAHSPAWSXRXTPX*DTYSVSYEXAPRFPKGERRTGIR*A 706
GW DD Y RA+SPAWS R P DT SVSYE APRFPKG++ +
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQV--- 65
Query: 705 AGSEQESARGSFQG 664
+G Q R + +G
Sbjct: 66 SGKRQGRNRRAHEG 79
Score = 44.4 bits (100), Expect = 0.007
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = -3
Query: 734 EKGGQVSGKRQGRNRRAHEGASRGXRLVSL*SCRVXPPXT 615
+K QVSGKRQGRNRRAHEGA+ SL PP T
Sbjct: 60 KKAEQVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 56.0 bits (129), Expect = 2e-06
Identities = 31/57 (54%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = +1
Query: 331 CINESANARGEAVCVLGALPXPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 498
CI + A AR EAV VL ALP RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 55.6 bits (128), Expect = 3e-06
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +1
Query: 430 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPRTVKRPRCWRFSIGSAPLTSITK 603
C R Q R G +P+N I +R + + + PRT F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 604 IDAQVXGGXTRQDYKDTRRXPLEAPSCALLFRP 702
I Q T+ +YK T PL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 54.4 bits (125), Expect = 6e-06
Identities = 25/32 (78%), Positives = 25/32 (78%)
Frame = -2
Query: 531 PFAGLLLTCSFLRYPLILWITVLPPLSELIPL 436
P LLTCSF YPLILWITVLPPLSEL PL
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPL 50
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 46.4 bits (105), Expect = 0.002
Identities = 24/38 (63%), Positives = 24/38 (63%)
Frame = +3
Query: 396 SLTDXXXXXXXXXXXXXXHSKAVIRLSTESGDNAGKNM 509
SLTD HSKAVIRLSTESGDNAGKNM
Sbjct: 22 SLTDSLRSVVRLRRAVSAHSKAVIRLSTESGDNAGKNM 59
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 44.0 bits (99), Expect = 0.009
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +3
Query: 819 VHEPPVXPHRCALSGXYRLESXP 887
+HEPPV P RCALSG YRLES P
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNP 23
Score = 34.3 bits (75), Expect = 7.2
Identities = 17/31 (54%), Positives = 18/31 (58%)
Frame = +1
Query: 886 PVXHDXSPLAPXXG*XDCXTRYXGGATKSLK 978
PV HD SPLA G RY GGAT+ LK
Sbjct: 23 PVRHDLSPLAAATGNRISRARYVGGATEFLK 53
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.036
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +2
Query: 323 VXXALMNRPTPGERRFAYWAXF 388
V ALMNRPT GERRFAYWA F
Sbjct: 23 VPAALMNRPTRGERRFAYWALF 44
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 41.1 bits (92), Expect = 0.063
Identities = 27/71 (38%), Positives = 29/71 (40%)
Frame = +1
Query: 616 VXGGXTRQDYKDTRRXPLEAPSCALLFRPCRLPDTCPPFSLREAWRXLIAHAVGISXRCX 795
V G TRQD K P P PPFSL + + GIS RC
Sbjct: 23 VRSGETRQDLKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARCR 82
Query: 796 SXAPSWAVCTN 828
S APSWAV N
Sbjct: 83 SFAPSWAVSKN 93
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 40.3 bits (90), Expect = 0.11
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2
Query: 134 DPDMIRYIDEXGQTTTRM 187
DPDMIRYIDE GQTTTRM
Sbjct: 346 DPDMIRYIDEFGQTTTRM 363
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.5 bits (88), Expect = 0.19
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = -3
Query: 383 APNTQTASPRALADSLMQ 330
APNTQTASPRALADSLMQ
Sbjct: 331 APNTQTASPRALADSLMQ 348
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 35.1 bits (77), Expect = 4.1
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 885 GWIXDDXYXXXXXXXXXXXXRAHSPAWSXRXTP 787
GW DD Y RAHSPAWS R TP
Sbjct: 9 GWTQDDSYRIRRSGRAERGVRAHSPAWSERPTP 41
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 865,279,254
Number of Sequences: 1657284
Number of extensions: 14023129
Number of successful extensions: 31122
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 29907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31092
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 136868624542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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