Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_K05
         (1361 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1294 - 36076524-36076554,36076821-36076891,36077221-360772...   101   1e-21
05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018    101   1e-21
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542...    25   4.2  
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600...    24   5.5  

>01_06_1294 -
           36076524-36076554,36076821-36076891,36077221-36077275,
           36077363-36077562,36078614-36078715
          Length = 152

 Score =  101 bits (243), Expect = 1e-21
 Identities = 55/100 (55%), Positives = 66/100 (66%)
 Frame = +3

Query: 87  VGLRKGHKTTKISAGRKGLTDKAIRIRPAXLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 266
           VG+ KGH  TK          + +  RP+  KG  TK   FVR L+REVVG A YEKR  
Sbjct: 12  VGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAPYEKRIT 61

Query: 267 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 386
           ELLKV KDKRALK  KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 62  ELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101


>05_05_0108 + 22451440-22451541,22452228-22452427,22452979-22453018
          Length = 113

 Score =  101 bits (242), Expect = 1e-21
 Identities = 55/100 (55%), Positives = 66/100 (66%)
 Frame = +3

Query: 87  VGLRKGHKTTKISAGRKGLTDKAIRIRPAXLKGLQTKHSKFVRDLVREVVGHAQYEKRAM 266
           VG+ KGH  TK          + +  RP+  KG  TK   FVR+L+REV G A YEKR  
Sbjct: 12  VGINKGHVVTK----------RELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRIT 61

Query: 267 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 386
           ELLKV KDKRALK  KR+LGTH RAK+KREE++ VL +MR
Sbjct: 62  ELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVLRKMR 101


>03_02_0071 +
           5425722-5427154,5427259-5427464,5428445-5428686,
           5428788-5429570
          Length = 887

 Score = 24.6 bits (51), Expect(2) = 4.2
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 781 PXPPPPPPXXK 749
           P PPPPPP  K
Sbjct: 356 PPPPPPPPPPK 366



 Score = 23.8 bits (49), Expect(2) = 4.2
 Identities = 9/23 (39%), Positives = 9/23 (39%)
 Frame = -2

Query: 826 PXXPXXXXXXXXXXXPXPPPPPP 758
           P  P           P PPPPPP
Sbjct: 342 PVQPSNAPPPPPPPPPPPPPPPP 364


>01_06_0090 +
           26358051-26359157,26359582-26359701,26359968-26360099,
           26360194-26360375,26360488-26360602,26362001-26362135,
           26362261-26362395
          Length = 641

 Score = 24.2 bits (50), Expect(2) = 5.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 781 PXPPPPPPXXKK 746
           P PPPPPP  ++
Sbjct: 290 PPPPPPPPPARR 301



 Score = 23.8 bits (49), Expect(2) = 5.5
 Identities = 9/23 (39%), Positives = 9/23 (39%)
 Frame = -2

Query: 826 PXXPXXXXXXXXXXXPXPPPPPP 758
           P  P           P PPPPPP
Sbjct: 276 PPMPALSVCGRAAAPPPPPPPPP 298


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,317,477
Number of Sequences: 37544
Number of extensions: 366415
Number of successful extensions: 11053
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7578
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4295031588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)