Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_K04
         (1251 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical pr...    29   5.2  
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr...    29   9.1  

>Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical
           protein F01D4.7 protein.
          Length = 341

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 491 RHEKKKMSMVHGMPSHYLCTEIFLNEKKNSSNXEW 595
           RH K+K++MV G     L +   +NE  +SS   W
Sbjct: 213 RHNKQKINMVKGRDHFILSSRFQMNENVSSSKLLW 247


>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical
           protein W08D2.5 protein.
          Length = 1256

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 532 RHTMDHRHFFFFVSCLNSCGFFFAI 458
           R T D   F  F++C++ CGF + I
Sbjct: 372 RFTKDLFKFILFLACISGCGFIYTI 396


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,217,496
Number of Sequences: 27780
Number of extensions: 291746
Number of successful extensions: 473
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 473
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3474674514
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)