Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_K02
         (1280 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0080 + 587674-588510                                             27   1.2  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    26   2.2  
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076           30   3.4  
01_06_0883 + 32708037-32708558,32708627-32708911,32709661-32709675     24   7.2  
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847...    29   7.9  
03_05_0781 + 27654764-27655429,27655902-27656004,27656535-276565...    29   7.9  

>07_01_0080 + 587674-588510
          Length = 278

 Score = 27.1 bits (57), Expect(2) = 1.2
 Identities = 11/27 (40%), Positives = 11/27 (40%)
 Frame = -3

Query: 1155 GGXPXXXPXXPXGGGFFXXXXPPPPPP 1075
            G      P    G G F    PPPPPP
Sbjct: 72   GAASTSTPPRLGGDGMFRRPPPPPPPP 98



 Score = 23.4 bits (48), Expect(2) = 1.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 1092 PPPPPPXP 1069
            PPPPPP P
Sbjct: 114  PPPPPPPP 121


>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 25.8 bits (54), Expect(2) = 2.2
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -3

Query: 1134 PXXPXGGGFFXXXXPPPPPP 1075
            P  P  G  F    PPPPPP
Sbjct: 653  PPAPGIGNKFPAPPPPPPPP 672



 Score = 23.4 bits (48), Expect(2) = 2.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 1092 PPPPPPXP 1069
            PPPPPP P
Sbjct: 689  PPPPPPPP 696


>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
          Length = 906

 Score = 30.3 bits (65), Expect = 3.4
 Identities = 21/91 (23%), Positives = 21/91 (23%)
 Frame = -3

Query: 1146 PXXXPXXPXGGGFFXXXXPPPPPPXPXXXXXXXXXXXXFXXXXXGXXXXXXXPXFXXXXX 967
            P   P  P  G       PPPPP  P                          P       
Sbjct: 303  PPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPR 362

Query: 966  FXXPXXGGXPXPXXXFXXXGXPXPPPXXGXP 874
               P  G  P P       G P PP   G P
Sbjct: 363  PPGPGPGPPPPPGAAGRGGGGPPPPALPGGP 393


>01_06_0883 + 32708037-32708558,32708627-32708911,32709661-32709675
          Length = 273

 Score = 24.2 bits (50), Expect(2) = 7.2
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = -3

Query: 1113 GFFXXXXPPPPPP 1075
            GF     PPPPPP
Sbjct: 34   GFLLPPPPPPPPP 46



 Score = 23.4 bits (48), Expect(2) = 7.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -3

Query: 1092 PPPPPPXP 1069
            PPPPPP P
Sbjct: 42   PPPPPPQP 49


>04_03_0977 + 21381857-21383757,21384299-21384458,21384669-21384717,
            21385117-21385169
          Length = 720

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 1119 GGGFFXXXXPPPPPPXP 1069
            GGG+     PPPPPP P
Sbjct: 94   GGGWVQLPPPPPPPPPP 110


>03_05_0781 + 27654764-27655429,27655902-27656004,27656535-27656590,
            27656895-27657059,27657078-27657083,27657657-27657770,
            27658170-27658262
          Length = 400

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -3

Query: 1146 PXXXPXXPXGGGFFXXXXPPPPPPXP 1069
            P   P  P GG F     PPPPPP P
Sbjct: 20   PPRRPVQPRGGIFL--LKPPPPPPFP 43


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,779,103
Number of Sequences: 37544
Number of extensions: 459267
Number of successful extensions: 9278
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6533
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)