Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_J24
(1263 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.48
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 32 1.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.9
09_03_0145 - 12749288-12751510 31 1.9
01_03_0005 + 11568545-11569119,11569179-11569191 31 2.5
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 30 3.4
03_04_0051 + 16852980-16852991,16853952-16854033,16854108-16854763 30 3.4
05_04_0132 + 18303925-18307164 30 4.4
04_04_0183 - 23384290-23384783,23385064-23385139,23385291-23385296 30 4.4
07_01_0479 + 3606663-3607448 29 5.9
03_05_0067 - 20460206-20460703,20461255-20461530 29 5.9
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 5.9
12_02_0299 - 17051570-17052474,17053542-17053755 24 6.9
06_01_0254 + 1898586-1899617 29 7.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 7.7
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.1 bits (72), Expect = 0.48
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 416 PPPXPXPPGXKXPXXXFFXXXXPXPPPXXGGGGXPP 309
PPP P P P P PPP GG PP
Sbjct: 355 PPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 31.1 bits (67), Expect = 1.9
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -2
Query: 416 PPPXPXPPGXKXPXXXFFXXXXPXPPPXXGGGGXPP 309
PPP P G P P PPP GG PP
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
Score = 29.1 bits (62), Expect = 7.7
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +2
Query: 443 PFSXXPPPPXFXKKKXPFXXXPXGXXXKKKTPRGXPKXXXXXGGGAXXXKTXGGXXGGXP 622
P + PPPP K P P +G P G GG GG P
Sbjct: 321 PAAAAPPPPPPPKAAPP--PPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
Query: 623 PKXGKXG 643
P K G
Sbjct: 379 PPPPKGG 385
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Frame = +2
Query: 278 PPPXXKXXXXGGGXPPPXXGGGXXGXXXKKXXPXXFXPPGGXGXGGG--XKKXXKKXPFS 451
P P G G PPP P PPG G GGG P +
Sbjct: 336 PAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRA 395
Query: 452 XXPPP 466
PPP
Sbjct: 396 RGPPP 400
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = -2
Query: 416 PPPXPXPPGXKXPXXXFFXXXXPXPP--PXXGGGGXPP 309
PPP P P P P PP GGGG PP
Sbjct: 349 PPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPP 386
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = -2
Query: 425 FXXPPPXPXPPGXKXPXXXFFXXXXPXPPP 336
F PPP P PP P + P PPP
Sbjct: 561 FSPPPPPPPPPPPPLPQSNYASSQPPPPPP 590
>09_03_0145 - 12749288-12751510
Length = 740
Score = 31.1 bits (67), Expect = 1.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 416 PPPXPXPPGXKXPXXXFFXXXXPXPPPXXGGG 321
PPP P PPG + P PPP GG
Sbjct: 30 PPPPPPPPGIQPPPPALPGMPHGRPPPPFPGG 61
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.7 bits (66), Expect = 2.5
Identities = 26/84 (30%), Positives = 29/84 (34%), Gaps = 11/84 (13%)
Frame = +2
Query: 278 PPPXXKXXXXGGGX---------PPPXXGGGXXGXXXKKXXPXXFXPPGGX--GXGGGXK 424
PPP GGG PPP GGG G + PP G G GGG +
Sbjct: 71 PPPSYPSGGGGGGGGGTVMYTSPPPPYSGGG--GGSSTGGGGIYYPPPTGGGGGGGGGWQ 128
Query: 425 KXXKKXPFSXXPPPPXFXKKKXPF 496
+ PPPP PF
Sbjct: 129 QGGGGGGAYPTPPPPNPFLPYFPF 152
Score = 25.4 bits (53), Expect(2) = 7.4
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -2
Query: 416 PPPXPXPPGXKXPXXXFFXXXXPXPPPXXGGGG 318
PPP P G PPP GGGG
Sbjct: 70 PPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGG 102
Score = 22.2 bits (45), Expect(2) = 7.4
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -2
Query: 344 PPPXXGGGGXPPXXXXXXXXGGGF 273
PPP GGGG GG +
Sbjct: 114 PPPTGGGGGGGGGWQQGGGGGGAY 137
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 416 PPPXPXPPGXKXPXXXFFXXXXPXPPPXXGG 324
PPP P PPG P P PPP G
Sbjct: 614 PPPPPRPPGAPPPPPPPGKPGGPPPPPPRPG 644
>03_04_0051 + 16852980-16852991,16853952-16854033,16854108-16854763
Length = 249
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +2
Query: 308 GGGXPPPXXGGGXXGXXXKKXXPXXFXPPGGXGXGGGXKKXXKK 439
GG P P GGG K GG G GGG + KK
Sbjct: 78 GGAKPMPGGGGGGAKAHANKPAGKDGSAGGGGGGGGGKPEMIKK 121
>05_04_0132 + 18303925-18307164
Length = 1079
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 1029 KKKXFXXXPPXGXPXKRGKKXXGGGGXGGXXTKN 1130
K K PP KRG + GGGG GG +N
Sbjct: 10 KPKDPLMTPPPSSAKKRGFRDDGGGGGGGSRPRN 43
>04_04_0183 - 23384290-23384783,23385064-23385139,23385291-23385296
Length = 191
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 281 PPXXKXXXXGGGXPPPXXGGGXXGXXXKKXXPXXFXPPGGXGXGGG 418
PP GG PP GGG G P G G GGG
Sbjct: 96 PPPAPYYGNGGYPPPHQRGGGGGGSGGGYYTPMTMATGGYYGGGGG 141
>07_01_0479 + 3606663-3607448
Length = 261
Score = 29.5 bits (63), Expect = 5.9
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 416 PPPXPXPPGXKXPXXXFFXXXXPXPPPXXGGGGXPP 309
PPP PP + P P PP GG PP
Sbjct: 169 PPPGQMPPPMRPPQMPIPFQRPPGVPPAFPGGPPPP 204
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 29.5 bits (63), Expect = 5.9
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 416 PPPXPXPPGXKXPXXXFFXXXXPXPPPXXGGGGXPP 309
PPP P P +F P PPP G PP
Sbjct: 4 PPPPPQWAMGPPPPPQYFQAGPPPPPPQYFQGAHPP 39
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.5 bits (63), Expect = 5.9
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 431 KXFXXPPPXPXPPGXKXPXXXFFXXXXPXPPPXXGGGGXPP 309
K PPP P PP P P PPP G PP
Sbjct: 350 KLMPPPPPPPPPPPPPPPPP---PPRPPPPPPPIKKGAPPP 387
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 24.2 bits (50), Expect(2) = 6.9
Identities = 18/64 (28%), Positives = 19/64 (29%), Gaps = 5/64 (7%)
Frame = -2
Query: 719 PPXXFFXKXPPPFXXXXFXGKXXXXXXXSPF-WGGXP----PXXPPXFFXXXPPPXXXXX 555
PP F P PF P+ W P P PP F PPP
Sbjct: 237 PPFLPFPLPPIPFLTPPSPPPPAFPFPLPPWPWAPPPAFPFPHLPPIFSPPSPPPPPPPA 296
Query: 554 FXXP 543
F P
Sbjct: 297 FPFP 300
Score = 23.4 bits (48), Expect(2) = 6.9
Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Frame = -2
Query: 425 FXXPPPXPXPPGXKXPXXXF-FXXXXPXPPP 336
+ PPP P PP P + F P PP
Sbjct: 317 YPSPPPPPPPPPPPPPSFPWPFPPLAPLFPP 347
>06_01_0254 + 1898586-1899617
Length = 343
Score = 29.1 bits (62), Expect = 7.7
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 389 PPGGXGXGGGXKKXXKKXPFSXXPPPP 469
P GG GGG PF+ PPPP
Sbjct: 67 PTGGDDDGGGGGGKIALPPFTQPPPPP 93
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.1 bits (62), Expect = 7.7
Identities = 32/122 (26%), Positives = 32/122 (26%), Gaps = 6/122 (4%)
Frame = +2
Query: 278 PPPXXKXXXXGGGXPPPXXGG-GXXGXXXKKXXPXXF---XPPGGXGXGGGXKKXXKKXP 445
PPP G PPP GG G P PP G GG
Sbjct: 1109 PPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAG 1168
Query: 446 FSXXPPPPXFXKKKXPFXXXP--XGXXXKKKTPRGXPKXXXXXGGGAXXXKTXGGXXGGX 619
F PPP P P G TP G P G GG
Sbjct: 1169 FRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPA 1228
Query: 620 PP 625
PP
Sbjct: 1229 PP 1230
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.155 0.538
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,219,472
Number of Sequences: 37544
Number of extensions: 755053
Number of successful extensions: 2297
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1932
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3910923072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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