Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_J23
         (1225 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein...   110   7e-26
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    25   4.5  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    25   5.9  

>AY137766-1|AAM94344.1|   78|Anopheles gambiae heat shock protein 70
           protein.
          Length = 78

 Score =  110 bits (265), Expect = 7e-26
 Identities = 51/75 (68%), Positives = 64/75 (85%), Gaps = 2/75 (2%)
 Frame = +2

Query: 722 NAVITVPAYFNDSQRQATKDAGQISGLNVLRVINXPTAAALAYGMDKT--DDKIIXVYDL 895
           +AVITVPAYFNDSQRQATKDAG I+GLNV+R+IN PTAAALAYG+DK    ++ + ++DL
Sbjct: 1   DAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDL 60

Query: 896 GGGTFXISVLXIQKG 940
           GGGTF +S+L I +G
Sbjct: 61  GGGTFDVSILTIDEG 75


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = -2

Query: 393 STTLGVLPSMTATHEFV--VPRSIPM-TAPRTP 304
           +TT+ V P+ T  HE V   P S P+  APR P
Sbjct: 172 NTTIAVQPAPTQPHELVGTDPLSSPLQAAPREP 204


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.6 bits (51), Expect = 5.9
 Identities = 23/117 (19%), Positives = 50/117 (42%)
 Frame = +2

Query: 176  LXCTGLSSXLYTQRNFSSILKSNATPTVPIYQRHGVQFRNKSEGVRGAVIGIDLGTTNSC 355
            L   G    L T RNF     ++ATP    ++R  ++ R  ++ ++       +  T+S 
Sbjct: 1393 LIAEGQKRTLATSRNFLLRRGTSATPAGGSFKRRSLKLRRGAKDLKEVENEYPVRRTDSI 1452

Query: 356  VAVMEGKTPKVVENSEGSRTTPSHVAFSKEGERLVGMPAKRQAVTNSGNTFYATKRL 526
             +  + K   + + S+ S   P  ++  +E   ++      ++  +S ++   TK L
Sbjct: 1453 QS--KRKVSSLSDRSDNSE--PGQISGGEESPGILSDDQPPESPCDSNDSDETTKNL 1505


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,048,454
Number of Sequences: 2352
Number of extensions: 23929
Number of successful extensions: 57
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 139382727
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)