Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_J20
(1247 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a pr... 69 4e-11
U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a pr... 69 4e-11
L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens (c... 69 4e-11
BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a ... 69 4e-11
BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a ... 69 4e-11
AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A ... 69 4e-11
U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a pr... 67 1e-10
BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein. 66 3e-10
BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein. 66 3e-10
BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein. 66 3e-10
AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein. 66 3e-10
AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L... 55 5e-07
BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7 pro... 42 0.006
BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein. 40 0.019
>U43701-1|AAB03210.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 68.9 bits (161), Expect = 4e-11
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG H + +KIR S FRR K R PKYPRK P +N++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
>U02032-1|AAA03341.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 68.9 bits (161), Expect = 4e-11
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG H + +KIR S FRR K R PKYPRK P +N++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
>L13799-1|AAA35681.1| 147|Homo sapiens protein ( Homo sapiens
(clone 01) liver expressed protein mRNA, 3'end. ).
Length = 147
Score = 68.9 bits (161), Expect = 4e-11
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG H + +KIR S FRR K R PKYPRK P +N++D Y IIKF
Sbjct: 11 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 70
>BC058041-1|AAH58041.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 68.9 bits (161), Expect = 4e-11
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG H + +KIR S FRR K R PKYPRK P +N++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
>BC014459-1|AAH14459.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 68.9 bits (161), Expect = 4e-11
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG H + +KIR S FRR K R PKYPRK P +N++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
>AF001689-1|AAC51934.1| 156|Homo sapiens ribosomal protein L23A
protein.
Length = 156
Score = 68.9 bits (161), Expect = 4e-11
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG H + +KIR S FRR K R PKYPRK P +N++D Y IIKF
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIIKF 79
>U37230-1|AAB17510.1| 156|Homo sapiens ribosomal protein L23a
protein.
Length = 156
Score = 66.9 bits (156), Expect = 1e-10
Identities = 31/60 (51%), Positives = 39/60 (65%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG H + +KIR S FRR K R PKYPRK P +N++D Y II F
Sbjct: 20 KALKAKKAVLKGVHSHKKKKIRTSPTFRRPKTLRLRRQPKYPRKSAPRRNKLDHYAIINF 79
>BC098172-1|AAH98172.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 65.7 bits (153), Expect = 3e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG HG + +KIR S F+R K R P+YPRK P +N++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
>BC096740-1|AAH96740.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 65.7 bits (153), Expect = 3e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG HG + +KIR S F+R K R P+YPRK P +N++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
>BC096706-1|AAH96706.1| 130|Homo sapiens RPL23AP13 protein protein.
Length = 130
Score = 65.7 bits (153), Expect = 3e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG HG + +KIR S F+R K R P+YPRK P +N++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
>AC092839-2|AAX93105.1| 130|Homo sapiens unknown protein.
Length = 130
Score = 65.7 bits (153), Expect = 3e-10
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ V+KG HG + +KIR S F+R K R P+YPRK P +N++D Y IIKF
Sbjct: 20 KALKAKKVVLKGVHGHKKKKIRMSPTFQRPKTLRLWRPPRYPRKTTPRRNKLDHYAIIKF 79
>AE006463-8|AAK61228.1| 156|Homo sapiens 60S ribosomal protein L23A
like protein.
Length = 156
Score = 55.2 bits (127), Expect = 5e-07
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +3
Query: 741 KALKAQRKVVKGEHGKRVRKIRNSVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
KALKA++ +KG H +K R S+ F+R K R P+YP K P +N++ Y +IKF
Sbjct: 20 KALKAKKAALKGVHSHIKKKTRTSLTFQRPKTLRRRRRPEYPWKSTPRRNKLGHYAVIKF 79
>BC065556-1|AAH65556.1| 121|Homo sapiens similar to RPL23AP7
protein protein.
Length = 121
Score = 41.5 bits (93), Expect = 0.006
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 810 SVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
S+ FRR K R P+YPRK P +N++ Y IIKF
Sbjct: 2 SLTFRRPKTLRLRRQPRYPRKSTPRRNKLGHYAIIKF 38
>BC105600-1|AAI05601.1| 121|Homo sapiens MGC70863 protein protein.
Length = 121
Score = 39.9 bits (89), Expect = 0.019
Identities = 17/37 (45%), Positives = 23/37 (62%)
Frame = +3
Query: 810 SVHFRRXKXFEPPRHPKYPRKXLPXKNRMDAYXIIKF 920
S+ FRR K R P+YP+K P +N++ Y IIKF
Sbjct: 2 SLTFRRPKTLRLRRQPRYPQKSTPRRNKLGHYAIIKF 38
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,758,523
Number of Sequences: 237096
Number of extensions: 1090031
Number of successful extensions: 2157
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2153
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17779932290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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