Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_J18
(1280 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 182 6e-46
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 64 3e-10
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 63 4e-10
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 60 3e-09
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 60 4e-09
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 58 1e-08
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 58 1e-08
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 58 1e-08
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 58 1e-08
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 58 1e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 58 1e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 58 1e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 58 1e-08
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 53 5e-07
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 53 5e-07
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 52 7e-07
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 52 9e-07
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 52 9e-07
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 52 9e-07
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 52 9e-07
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 52 9e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 52 9e-07
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 52 9e-07
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 52 9e-07
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 52 9e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 51 2e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 51 2e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 51 2e-06
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 51 2e-06
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 50 3e-06
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 50 3e-06
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 49 8e-06
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 49 8e-06
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 48 2e-05
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 47 3e-05
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 47 3e-05
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 46 4e-05
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 45 1e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 44 2e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 44 2e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 44 3e-04
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 44 3e-04
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 44 3e-04
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 44 3e-04
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 42 7e-04
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 42 7e-04
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 42 7e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 42 0.001
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 41 0.002
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 41 0.002
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 41 0.002
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 40 0.003
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 40 0.005
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 40 0.005
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 39 0.007
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 38 0.015
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 37 0.027
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 37 0.027
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.035
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.035
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 37 0.035
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 37 0.035
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 37 0.035
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 37 0.035
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 37 0.035
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 37 0.035
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 37 0.035
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 37 0.035
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 36 0.047
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 36 0.082
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 36 0.082
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 36 0.082
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.14
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.14
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.14
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 34 0.25
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 34 0.25
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 34 0.25
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 34 0.25
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 34 0.25
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 33 0.33
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 33 0.33
U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna bi... 33 0.33
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 33 0.44
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 33 0.44
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 33 0.58
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 33 0.58
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 32 1.0
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 31 1.8
U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like pr... 31 2.3
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 2.3
U64848-12|AAY86244.1| 231|Caenorhabditis elegans Hypothetical p... 30 4.1
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 182 bits (442), Expect = 6e-46
Identities = 91/178 (51%), Positives = 122/178 (68%), Gaps = 2/178 (1%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
RSVFVG++ + +++IFS G VLS K+V DR TGKPKGYGF E+ +TA A+
Sbjct: 18 RSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIR 77
Query: 381 NLNGYEIGGRSLXVDNACTEKSRMEMQALMQGPQV--ENPYGDPVEPEKAPEAISKAVAT 554
NLNGYE+ GR L VD+A + E + P ENPYG + KAPE IS+ VA+
Sbjct: 78 NLNGYELSGRILRVDSAAGGMNMEEFGSSSNAPAPVEENPYGPECDAGKAPERISQTVAS 137
Query: 555 LPPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLH 728
L PE+MFELMKQ++ ++NNP+E L+++PQ+AYA+LQA V+MRIVDP TA+ +LH
Sbjct: 138 LAPEKMFELMKQLQESLKNNPSELHKFLVEHPQIAYAVLQAAVVMRIVDPQTALGLLH 195
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 63.7 bits (148), Expect = 3e-10
Identities = 29/76 (38%), Positives = 47/76 (61%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
SV+VG++P T ++ F+ VG V + ++V+DR TG+P+G+ F E+ + A A+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 384 LNGYEIGGRSLXVDNA 431
LNG GR+L V+ A
Sbjct: 67 LNGVAFNGRNLRVNYA 82
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 63.3 bits (147), Expect = 4e-10
Identities = 29/76 (38%), Positives = 46/76 (60%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
SV+VG+ P T +L FS +G + + ++V DR TG+P+G+ F E+ + +A A+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 384 LNGYEIGGRSLXVDNA 431
+NG E GR L V+ A
Sbjct: 66 MNGAEFNGRPLRVNLA 81
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 60.1 bits (139), Expect = 3e-09
Identities = 29/76 (38%), Positives = 43/76 (56%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
SV+VG+ P T L FS G V + ++V DR TG+P+G+ F E+ + A A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 384 LNGYEIGGRSLXVDNA 431
NG + GR+L V+ A
Sbjct: 65 FNGVDFNGRALRVNLA 80
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 59.7 bits (138), Expect = 4e-09
Identities = 25/76 (32%), Positives = 46/76 (60%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++ + +LP T +++++F+ +G + S KLV D+ TG+ GYGF Y +E AL A+ +
Sbjct: 43 NLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSS 102
Query: 384 LNGYEIGGRSLXVDNA 431
NG + +++ V A
Sbjct: 103 FNGLRLQNKTIKVSYA 118
Score = 40.7 bits (91), Expect = 0.002
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+FV +L S L +FS G +++ K++ D T + KGY F A +AM +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMSNYTEAYNAMLSL 434
Query: 387 NGYEIGGRSLXV 422
NG + G++L V
Sbjct: 435 NGTNLAGKTLQV 446
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 58.4 bits (135), Expect = 1e-08
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +3
Query: 177 KASWXXPCRS---VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEY 347
K SW + +++G L A + + A+FS G V++ L+ D+ TGK KG+ F Y
Sbjct: 27 KKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCY 86
Query: 348 KXQETALSAMXNLNGYEIGGRSLXVDN 428
K Q + + A+ N NG + R + VD+
Sbjct: 87 KDQRSTILAVDNFNGISLHKRMIRVDH 113
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 58.0 bits (134), Expect = 1e-08
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+F+G LP+ T Q+K + GP+ +F L D + G KGY F EY A+ L
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIAGL 351
Query: 387 NGYEIGGRSLXVDNACTEKSR 449
NG ++G + L V AC + R
Sbjct: 352 NGMQLGDKQLVVQLACANQQR 372
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 58.0 bits (134), Expect = 1e-08
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+F+G LP+ T Q+K + GP+ +F L D + G KGY F EY A+ L
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIAGL 351
Query: 387 NGYEIGGRSLXVDNACTEKSR 449
NG ++G + L V AC + R
Sbjct: 352 NGMQLGDKQLVVQLACANQQR 372
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 58.0 bits (134), Expect = 1e-08
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+F+G LP+ T Q+K + GP+ +F L D + G KGY F EY A+ L
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIAGL 326
Query: 387 NGYEIGGRSLXVDNACTEKSR 449
NG ++G + L V AC + R
Sbjct: 327 NGMQLGDKQLVVQLACANQQR 347
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 58.0 bits (134), Expect = 1e-08
Identities = 29/81 (35%), Positives = 42/81 (51%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+F+G LP+ T Q+K + GP+ +F L D + G KGY F EY A+ L
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQAIAGL 329
Query: 387 NGYEIGGRSLXVDNACTEKSR 449
NG ++G + L V AC + R
Sbjct: 330 NGMQLGDKQLVVQLACANQQR 350
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/94 (29%), Positives = 48/94 (51%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
++VG + L+ F GP+ S + +D ATG K + F EY+ E AL A ++
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 387 NGYEIGGRSLXVDNACTEKSRMEMQALMQGPQVE 488
NG +GGR+L V++ ++ R+ P ++
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIID 197
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/70 (21%), Positives = 34/70 (48%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
V+V + + LK++F G ++ +L +G+G+ E+ + A+ +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 387 NGYEIGGRSL 416
N +++GG+ L
Sbjct: 269 NMFDLGGQYL 278
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/94 (29%), Positives = 48/94 (51%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
++VG + L+ F GP+ S + +D ATG K + F EY+ E AL A ++
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 387 NGYEIGGRSLXVDNACTEKSRMEMQALMQGPQVE 488
NG +GGR+L V++ ++ R+ P ++
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIID 197
Score = 35.1 bits (77), Expect = 0.11
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
V+V + + LK++F G ++ +L +G+G+ E+ + A+ +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 387 NGYEIGGRSLXVDNACT 437
N +++GG+ L V T
Sbjct: 269 NMFDLGGQYLRVGKCVT 285
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 58.0 bits (134), Expect = 1e-08
Identities = 28/94 (29%), Positives = 48/94 (51%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
++VG + L+ F GP+ S + +D ATG K + F EY+ E AL A ++
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 387 NGYEIGGRSLXVDNACTEKSRMEMQALMQGPQVE 488
NG +GGR+L V++ ++ R+ P ++
Sbjct: 164 NGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIID 197
Score = 35.1 bits (77), Expect = 0.11
Identities = 17/77 (22%), Positives = 36/77 (46%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
V+V + + LK++F G ++ +L +G+G+ E+ + A+ +
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAGM 268
Query: 387 NGYEIGGRSLXVDNACT 437
N +++GG+ L V T
Sbjct: 269 NMFDLGGQYLRVGKCVT 285
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 52.8 bits (121), Expect = 5e-07
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ HLP A+L +F+ G ++S K+ DRAT + K +GF Y ++ +A+
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 384 LNGYEIGGRSLXV 422
+NG++IG + L V
Sbjct: 490 MNGFQIGMKRLKV 502
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 52.8 bits (121), Expect = 5e-07
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ HLP A+L +F+ G ++S K+ DRAT + K +GF Y ++ +A+
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 384 LNGYEIGGRSLXV 422
+NG++IG + L V
Sbjct: 490 MNGFQIGMKRLKV 502
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 52.4 bits (120), Expect = 7e-07
Identities = 30/79 (37%), Positives = 41/79 (51%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
VFVG L S + +L+ F G V K++ D T K KGYGF Y +E A A+ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 387 NGYEIGGRSLXVDNACTEK 443
NG +G R++ N T K
Sbjct: 194 NGAWLGRRTIRT-NWATRK 211
Score = 34.3 bits (75), Expect = 0.19
Identities = 19/69 (27%), Positives = 38/69 (55%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
SV+VG++ + +++ F GP+ + T K +GY F +++ +E+A A+
Sbjct: 257 SVYVGNIANLGED-EIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIVQ 309
Query: 384 LNGYEIGGR 410
+N +IGG+
Sbjct: 310 MNNADIGGQ 318
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 52.0 bits (119), Expect = 9e-07
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ HLP + L F+ G +LS K+ D+ T K +GF Y+ ++A +A+
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 384 LNGYEIGGRSLXV 422
+NG++IG + L V
Sbjct: 396 MNGFQIGSKRLKV 408
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 52.0 bits (119), Expect = 9e-07
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ HLP + L F+ G +LS K+ D+ T K +GF Y+ ++A +A+
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 384 LNGYEIGGRSLXV 422
+NG++IG + L V
Sbjct: 560 MNGFQIGSKRLKV 572
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 52.0 bits (119), Expect = 9e-07
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ HLP + L F+ G +LS K+ D+ T K +GF Y+ ++A +A+
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 384 LNGYEIGGRSLXV 422
+NG++IG + L V
Sbjct: 560 MNGFQIGSKRLKV 572
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 52.0 bits (119), Expect = 9e-07
Identities = 30/79 (37%), Positives = 40/79 (50%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
VFVG L S +L+ F G V K++ D T K KGYGF Y +E A A+ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 387 NGYEIGGRSLXVDNACTEK 443
NG +G R++ N T K
Sbjct: 84 NGQWLGRRTIRT-NWATRK 101
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
SV+VG++ S T +++ F+ G + ++ K +GY F ++ ++ A A+
Sbjct: 129 SVYVGNIASL-TEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQ 181
Query: 384 LNGYEIGGR 410
+N ++GG+
Sbjct: 182 MNNQDVGGQ 190
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 52.0 bits (119), Expect = 9e-07
Identities = 30/79 (37%), Positives = 40/79 (50%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
VFVG L S +L+ F G V K++ D T K KGYGF Y +E A A+ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 387 NGYEIGGRSLXVDNACTEK 443
NG +G R++ N T K
Sbjct: 94 NGQWLGRRTIRT-NWATRK 111
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
SV+VG++ S T +++ F+ G + ++ K +GY F ++ ++ A A+
Sbjct: 139 SVYVGNIASL-TEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQ 191
Query: 384 LNGYEIGGR 410
+N ++GG+
Sbjct: 192 MNNQDVGGQ 200
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 52.0 bits (119), Expect = 9e-07
Identities = 30/79 (37%), Positives = 40/79 (50%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
VFVG L S +L+ F G V K++ D T K KGYGF Y +E A A+ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 387 NGYEIGGRSLXVDNACTEK 443
NG +G R++ N T K
Sbjct: 197 NGQWLGRRTIRT-NWATRK 214
Score = 37.9 bits (84), Expect = 0.015
Identities = 21/75 (28%), Positives = 37/75 (49%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R+++VG+L S T + +F+ +G V K++FD G Y F E+ A A+
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQASQALQ 102
Query: 381 NLNGYEIGGRSLXVD 425
+N + R + V+
Sbjct: 103 TMNKRLLLDREMKVN 117
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
SV+VG++ S T +++ F+ G + ++ K +GY F ++ ++ A A+
Sbjct: 242 SVYVGNIASL-TEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQ 294
Query: 384 LNGYEIGGR 410
+N ++GG+
Sbjct: 295 MNNQDVGGQ 303
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 52.0 bits (119), Expect = 9e-07
Identities = 30/79 (37%), Positives = 40/79 (50%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
VFVG L S +L+ F G V K++ D T K KGYGF Y +E A A+ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 387 NGYEIGGRSLXVDNACTEK 443
NG +G R++ N T K
Sbjct: 165 NGQWLGRRTIRT-NWATRK 182
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/69 (24%), Positives = 37/69 (53%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
SV+VG++ S T +++ F+ G + ++ K +GY F ++ ++ A A+
Sbjct: 210 SVYVGNIASL-TEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIVQ 262
Query: 384 LNGYEIGGR 410
+N ++GG+
Sbjct: 263 MNNQDVGGQ 271
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFD 305
R+++VG+L S T + +F+ +G V K++FD
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 52.0 bits (119), Expect = 9e-07
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ HLP + L F+ G +LS K+ D+ T K +GF Y+ ++A +A+
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 384 LNGYEIGGRSLXV 422
+NG++IG + L V
Sbjct: 489 MNGFQIGSKRLKV 501
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 52.0 bits (119), Expect = 9e-07
Identities = 24/73 (32%), Positives = 42/73 (57%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ HLP + L F+ G +LS K+ D+ T K +GF Y+ ++A +A+
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 384 LNGYEIGGRSLXV 422
+NG++IG + L V
Sbjct: 560 MNGFQIGSKRLKV 572
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 51.2 bits (117), Expect = 2e-06
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+F+ +LP A L+ +F G V ++V D+ TG KG+ E+ E A++A L
Sbjct: 281 LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSAL 340
Query: 387 NGYEIGGRSLXV---DNACTEKSRMEMQALMQGPQVENPYGDPVEPEKAPEAISK 542
+GY GR + + D T++ E + + P +NP + EK ++ +
Sbjct: 341 DGYVFKGRMMHILPGDEKRTKEGEEESEVVPDDP--DNPLKAEAKKEKKKKSFKE 393
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 51.2 bits (117), Expect = 2e-06
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
VFVG L + LK+ F+ G V K++ D T K KGYGF + ++ A +A+ +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 387 NGYEIGGRSLXVDNACTEKS 446
NG IG R++ + A + S
Sbjct: 197 NGKWIGKRAVRTNWAARKNS 216
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
SV+VG++ T A L+ +FS G + ++ K + Y F Y+ +E A A+
Sbjct: 238 SVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECATKAIME 291
Query: 384 LNGYEIGGRSL 416
+NG E+ G +
Sbjct: 292 MNGKEMAGNQV 302
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 51.2 bits (117), Expect = 2e-06
Identities = 25/77 (32%), Positives = 41/77 (53%)
Frame = +3
Query: 195 PCRSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSA 374
P R++FVG + + ++L+ F G + +V D A GKP+GY F EY + +A
Sbjct: 102 PYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEA-GKPRGYAFIEYSDKAEMHTA 160
Query: 375 MXNLNGYEIGGRSLXVD 425
+G ++ G+ L VD
Sbjct: 161 YKKADGIKVDGKRLVVD 177
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 51.2 bits (117), Expect = 2e-06
Identities = 27/87 (31%), Positives = 45/87 (51%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R+++VG T L A F G V++ + D +GK +G+GF E+ E A A+
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAID 70
Query: 381 NLNGYEIGGRSLXVDNACTEKSRMEMQ 461
N+N E+ G+++ V+ A K+ Q
Sbjct: 71 NMNESELFGKTIRVNFARPPKATERSQ 97
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 50.4 bits (115), Expect = 3e-06
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 171 RHKASWXXPCRSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYK 350
R +A + VF+G L + +T +K F G V L+FD+AT + +G+GF +
Sbjct: 124 RTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFD 183
Query: 351 XQETALSAMXNLNGYEIGGRSLXVDNACTEKSRMEMQA-LMQGPQVENPYGDPVE 512
E A + ++ +EI G+ + A ++ + +Q + N YG P E
Sbjct: 184 SDEVA-DKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYGMPPE 237
Score = 34.3 bits (75), Expect = 0.19
Identities = 19/84 (22%), Positives = 42/84 (50%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+F+G L TA L+ F G V ++ D AT + +G+GF + +++ + N
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITF-VDPSSVDKVLNN 105
Query: 387 NGYEIGGRSLXVDNACTEKSRMEM 458
+E+ G+ + A ++++ ++
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKL 129
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 50.4 bits (115), Expect = 3e-06
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Frame = +3
Query: 171 RHKASWXXPCRSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYK 350
R +A + VF+G L + +T +K F G V L+FD+AT + +G+GF +
Sbjct: 124 RTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFD 183
Query: 351 XQETALSAMXNLNGYEIGGRSLXVDNACTEKSRMEMQA-LMQGPQVENPYGDPVE 512
E A + ++ +EI G+ + A ++ + +Q + N YG P E
Sbjct: 184 SDEVA-DKVCEIHFHEINGKMVECKKAQPKEVMLPVQLNKSRAAAARNLYGMPPE 237
Score = 34.3 bits (75), Expect = 0.19
Identities = 19/84 (22%), Positives = 42/84 (50%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+F+G L TA L+ F G V ++ D AT + +G+GF + +++ + N
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITF-VDPSSVDKVLNN 105
Query: 387 NGYEIGGRSLXVDNACTEKSRMEM 458
+E+ G+ + A ++++ ++
Sbjct: 106 REHELDGKKIDPKVAFPKRTQAKL 129
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 48.8 bits (111), Expect = 8e-06
Identities = 25/87 (28%), Positives = 46/87 (52%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
+++VG L + + L + GPV+S + DR T +G+GF E+ +E A A+
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 73
Query: 384 LNGYEIGGRSLXVDNACTEKSRMEMQA 464
LN ++ G+ + V+ A + M++ A
Sbjct: 74 LNMIKLYGKPIKVNKASAHEKNMDVGA 100
Score = 39.1 bits (87), Expect = 0.007
Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 3/193 (1%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSF-KLVFDRATGKPKGYGFCEYKXQETALSAMX 380
++FVG+L L FS G +L K++ D +G KG+ F + E + +A+
Sbjct: 101 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Query: 381 NLNGYEIGGRSLXVDNACTEKSRMEMQ--ALMQGPQVENPYGDPVEPEKAPEAISKAVAT 554
+NG + R++ V A S+ E A + +NP P + + V
Sbjct: 161 AMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSDVPLGVPA 220
Query: 555 LPPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 734
P M + + P L+ Q Y Q Q + P +VT + P
Sbjct: 221 NTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGY---QGQ-YPPVPPPPPSVTPMPPP 276
Query: 735 NPVPPILLPGDKP 773
P P + P P
Sbjct: 277 MPPTPGMTPRPPP 289
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 48.8 bits (111), Expect = 8e-06
Identities = 25/87 (28%), Positives = 46/87 (52%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
+++VG L + + L + GPV+S + DR T +G+GF E+ +E A A+
Sbjct: 24 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 83
Query: 384 LNGYEIGGRSLXVDNACTEKSRMEMQA 464
LN ++ G+ + V+ A + M++ A
Sbjct: 84 LNMIKLYGKPIKVNKASAHEKNMDVGA 110
Score = 39.1 bits (87), Expect = 0.007
Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 3/193 (1%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSF-KLVFDRATGKPKGYGFCEYKXQETALSAMX 380
++FVG+L L FS G +L K++ D +G KG+ F + E + +A+
Sbjct: 111 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Query: 381 NLNGYEIGGRSLXVDNACTEKSRMEMQ--ALMQGPQVENPYGDPVEPEKAPEAISKAVAT 554
+NG + R++ V A S+ E A + +NP P + + V
Sbjct: 171 AMNGQFLCNRAITVSYAFKRDSKGERHGTAAERMLAAQNPLFPKDRPHQVFSDVPLGVPA 230
Query: 555 LPPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIMRIVDPATAVTMLHPS 734
P M + + P L+ Q Y Q Q + P +VT + P
Sbjct: 231 NTPLAMPGVHAAIAAHATGRPGYQPPPLMGMAQSGY---QGQ-YPPVPPPPPSVTPMPPP 286
Query: 735 NPVPPILLPGDKP 773
P P + P P
Sbjct: 287 MPPTPGMTPRPPP 299
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 47.6 bits (108), Expect = 2e-05
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +3
Query: 195 PCRSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSA 374
P + + V +L S T L+ +F G + LV+DR +G +G+GF + E A +A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 375 MXNLNGYEIGGRSLXVDNACTEK 443
L ++ G + VD + T++
Sbjct: 134 RDKLCNTDLDGHKIRVDFSLTKR 156
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 47.2 bits (107), Expect = 3e-05
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
++VGH+P+ L +F G + +L+ D +G +GY F Y +E A +A
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 387 NGYEIG-GRSLXVD 425
+G+EI G+ L V+
Sbjct: 262 DGHEISTGKPLKVN 275
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 46.8 bits (106), Expect = 3e-05
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSX-VGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
++FVG+LP T L FS +GPV + ++V D+ TGK KG+ F +K Q++++S
Sbjct: 247 AIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFK-QDSSVSLAL 305
Query: 381 NLNGYEIGGRSLXV 422
++ ++ R L +
Sbjct: 306 SMETIKMEKRDLRI 319
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 46.4 bits (105), Expect = 4e-05
Identities = 26/84 (30%), Positives = 44/84 (52%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
+SV+VG++ ATA +++ F G V + DR +G PKG+ + E+ +E +A+
Sbjct: 78 KSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALA 137
Query: 381 NLNGYEIGGRSLXVDNACTEKSRM 452
+ + GR + VD T K M
Sbjct: 138 MTDSL-LRGRQIKVDPKRTNKPGM 160
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 44.8 bits (101), Expect = 1e-04
Identities = 25/73 (34%), Positives = 38/73 (52%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
VFV ++ AT + FS G + + L DR TG KGY EY+ Q+ A A+
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 387 NGYEIGGRSLXVD 425
N ++ G+++ VD
Sbjct: 117 NDTDLLGQNVKVD 129
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ +L + FS G +LS K+ D G KGYGF ++ +E A +A+
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQK 179
Query: 384 LNGYEIGGRSLXV 422
+NG + G+ + V
Sbjct: 180 VNGMLLAGKKVFV 192
Score = 39.1 bits (87), Expect = 0.007
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
S++VG L + L FS GPVLS ++ D AT GY + ++ A AM
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 384 LNGYEIGGRSLXV 422
+N + G+ + +
Sbjct: 93 MNFEALHGKPMRI 105
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ +L + FS G +LS K+ D G KGYGF ++ +E A +A+
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQK 116
Query: 384 LNGYEIGGRSLXV 422
+NG + G+ + V
Sbjct: 117 VNGMLLAGKKVFV 129
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ +L + FS G +LS K+ D G KGYGF ++ +E A +A+
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFETEEAAQNAIQK 179
Query: 384 LNGYEIGGRSLXV 422
+NG + G+ + V
Sbjct: 180 VNGMLLAGKKVFV 192
Score = 39.1 bits (87), Expect = 0.007
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
S++VG L + L FS GPVLS ++ D AT GY + ++ A AM
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 384 LNGYEIGGRSLXV 422
+N + G+ + +
Sbjct: 93 MNFEALHGKPMRI 105
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
+VFV + +L A+FS G + S ++ D A GKPKG+GF + Q+ A A+
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 384 LNGYEIGGRSLXVDNACTEKSRMEMQA 464
LN + G + + C + + E A
Sbjct: 298 LNDSILEGTDCKL-SVCRAQKKSERSA 323
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ +L + FS G +LS K+ D G KGYGF ++ + +A +A+
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEK 204
Query: 384 LNGYEIGGRSLXVDNACTEKSRME 455
+NG + + + V RM+
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMK 228
Score = 38.7 bits (86), Expect = 0.009
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
S+++G L + A L FS GPVLS ++ D + GY + ++ A A+
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 384 LNGYEIGGRSLXV 422
+N I GR + +
Sbjct: 118 MNFEVIHGRPMRI 130
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 43.6 bits (98), Expect = 3e-04
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
+VFV + +L A+FS G + S ++ D A GKPKG+GF + Q+ A A+
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQAVEK 297
Query: 384 LNGYEIGGRSLXVDNACTEKSRMEMQA 464
LN + G + + C + + E A
Sbjct: 298 LNDSILEGTDCKL-SVCRAQKKSERSA 323
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/84 (26%), Positives = 40/84 (47%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
++F+ +L + FS G +LS K+ D G KGYGF ++ + +A +A+
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIEK 204
Query: 384 LNGYEIGGRSLXVDNACTEKSRME 455
+NG + + + V RM+
Sbjct: 205 VNGMLLSDKKVYVGKFQPRAQRMK 228
Score = 38.7 bits (86), Expect = 0.009
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
S+++G L + A L FS GPVLS ++ D + GY + ++ A A+
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 384 LNGYEIGGRSLXV 422
+N I GR + +
Sbjct: 118 MNFEVIHGRPMRI 130
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 43.6 bits (98), Expect = 3e-04
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R++ + + L+ FS VG V +++ D TG+ KG + E+ +E+ +
Sbjct: 25 RTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLA 84
Query: 381 NLNGYEIGGRSLXVDNACTEKSR 449
LNG + G L + C E++R
Sbjct: 85 -LNGQRLMGAPLQIQRTCAERNR 106
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 43.6 bits (98), Expect = 3e-04
Identities = 22/83 (26%), Positives = 40/83 (48%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R++ + + L+ FS VG V +++ D TG+ KG + E+ +E+ +
Sbjct: 170 RTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLA 229
Query: 381 NLNGYEIGGRSLXVDNACTEKSR 449
LNG + G L + C E++R
Sbjct: 230 -LNGQRLMGAPLQIQRTCAERNR 251
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 42.3 bits (95), Expect = 7e-04
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
VFVG++ + ++ I + G V S+K + + GK +G+GFC + E L A+ L
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNVASWKRI-KGSNGKLQGFGFCHFTDLEGTLRALRIL 107
Query: 387 NGYEIGGRSLXV 422
+ + +G + L V
Sbjct: 108 HEFHLGDKKLTV 119
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 42.3 bits (95), Expect = 7e-04
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
VFVG++ + ++ I + G V S+K + + GK +G+GFC + E L A+ L
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNVASWKRI-KGSNGKLQGFGFCHFTDLEGTLRALRIL 107
Query: 387 NGYEIGGRSLXV 422
+ + +G + L V
Sbjct: 108 HEFHLGDKKLTV 119
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 42.3 bits (95), Expect = 7e-04
Identities = 26/90 (28%), Positives = 42/90 (46%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R + V ++P L A+F VGPV+ +++F+ K G+GF + + A A
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSK--GFGFVTMQNPDDADRARA 157
Query: 381 NLNGYEIGGRSLXVDNACTEKSRMEMQALM 470
NG I GR + V+ A + + LM
Sbjct: 158 EFNGTTIEGRRVEVNLATQRVHNKKAKPLM 187
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 42.3 bits (95), Expect = 7e-04
Identities = 26/90 (28%), Positives = 42/90 (46%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R + V ++P L A+F VGPV+ +++F+ K G+GF + + A A
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSK--GFGFVTMQNPDDADRARA 157
Query: 381 NLNGYEIGGRSLXVDNACTEKSRMEMQALM 470
NG I GR + V+ A + + LM
Sbjct: 158 EFNGTTIEGRRVEVNLATQRVHNKKAKPLM 187
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 42.3 bits (95), Expect = 7e-04
Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
RSV+VG++ +T ++++ F+ G V + D+ TG K + F E++ E+ A+
Sbjct: 46 RSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESVQLALV 105
Query: 381 NLNGYEIGGRSLXVDNACTEKSRMEMQALMQGPQ--VENPYGDP 506
L+G R + V T K M A Q P ++ +G P
Sbjct: 106 -LSGTMFRNRKIMVTLKRTNKPGMGRTATAQKPAHFAKSSHGKP 148
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = +3
Query: 213 VGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNLN 389
V +LP +L+ +F +G V+ + D+ TG PKG+ F ++ ++ A A+ LN
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R +F+G L T QL FS GPV+ ++ D T +G+GF + +A SAM
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM- 107
Query: 381 NLNGYEIGGRSLXVDNACTEKSRMEM 458
N +++GG+++ A + M
Sbjct: 108 NDRPHKLGGKTVDSKRAIPREQMSSM 133
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R +F+G L T QL FS GPV+ ++ D T +G+GF + +A SAM
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM- 127
Query: 381 NLNGYEIGGRSLXVDNACTEKSRMEM 458
N +++GG+++ A + M
Sbjct: 128 NDRPHKLGGKTVDSKRAIPREQMSSM 153
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 40.7 bits (91), Expect = 0.002
Identities = 26/86 (30%), Positives = 42/86 (48%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R +F+G L T QL FS GPV+ ++ D T +G+GF + +A SAM
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM- 128
Query: 381 NLNGYEIGGRSLXVDNACTEKSRMEM 458
N +++GG+++ A + M
Sbjct: 129 NDRPHKLGGKTVDSKRAIPREQMSSM 154
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 40.3 bits (90), Expect = 0.003
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 3/99 (3%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+FVG LP + L F G + ++ DR T K +GYGF K + +A A +
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 387 NGYEIGGRSLXVDNA---CTEKSRMEMQALMQGPQVENP 494
N I GR V+ A ++ +++ AL G QV+ P
Sbjct: 97 NPI-IDGRKANVNLAYLGAKPRTNVQLAALAAG-QVQLP 133
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 39.5 bits (88), Expect = 0.005
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 249 LKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNLN 389
L+ + S G + S K + D+AT KGYGF +++ + A +A+ LN
Sbjct: 123 LREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLN 169
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 39.5 bits (88), Expect = 0.005
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = +3
Query: 249 LKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNLN 389
L+ + S G + S K + D+AT KGYGF +++ + A +A+ LN
Sbjct: 97 LREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDGLN 143
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 39.1 bits (87), Expect = 0.007
Identities = 22/73 (30%), Positives = 35/73 (47%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXN 383
S++VG L + L FS GPVLS ++ D AT GY + ++ A AM
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 384 LNGYEIGGRSLXV 422
+N + G+ + +
Sbjct: 93 MNFEALHGKPMRI 105
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 38.3 bits (85), Expect = 0.012
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R VF+ ++ A LK++ G ++F + + GKPKG E++ +E A +
Sbjct: 45 RMVFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRNGKPKGNAVVEFETREGAEKCVE 104
Query: 381 NLNGYEIGGRSL 416
NL ++ GR++
Sbjct: 105 NLQKFDWKGRTI 116
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 37.9 bits (84), Expect = 0.015
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
VFV ++ AT +LKA+FS G V S + V + GKPKG F ++ + +A + +
Sbjct: 685 VFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVASG 743
Query: 387 NGYEIGGRSLXV 422
+ + R L V
Sbjct: 744 DKLMLRERELEV 755
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 37.1 bits (82), Expect = 0.027
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
+ V+VG+LP +++ IF G + K V D +G+ + F E++ A A+
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRI---KYV-DIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 381 NLNGYEIGGRSLXVD 425
+GYE GR + V+
Sbjct: 65 ARDGYEFDGRRIRVE 79
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 37.1 bits (82), Expect = 0.027
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
+ V+VG+LP +++ IF G + K V D +G+ + F E++ A A+
Sbjct: 9 QKVYVGNLPGDVREKEVEDIFHKYGRI---KYV-DIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 381 NLNGYEIGGRSLXVD 425
+GYE GR + V+
Sbjct: 65 ARDGYEFDGRRIRVE 79
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.7 bits (81), Expect = 0.035
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +3
Query: 195 PCRSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSA 374
P +FV L T L+ IFS G + + ++V DR +G Y F E+ ++ A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 375 MXNLNGYEIGGRSLXVD 425
++ I R + VD
Sbjct: 299 FFKMDNVLIDDRRIHVD 315
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.7 bits (81), Expect = 0.035
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +3
Query: 195 PCRSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSA 374
P +FV L T L+ IFS G + + ++V DR +G Y F E+ ++ A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 375 MXNLNGYEIGGRSLXVD 425
++ I R + VD
Sbjct: 299 FFKMDNVLIDDRRIHVD 315
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 36.7 bits (81), Expect = 0.035
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +3
Query: 195 PCRSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSA 374
P +FV L T L+ IFS G + + ++V DR +G Y F E+ ++ A
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Query: 375 MXNLNGYEIGGRSLXVD 425
++ I R + VD
Sbjct: 230 FFKMDNVLIDDRRIHVD 246
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 36.7 bits (81), Expect = 0.035
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
V+VG LPS AT+ +L+ IF G + + V+ +P G+ F EY A A+ L
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRI---RKVW--VARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 387 NGYEIGG 407
+G I G
Sbjct: 60 DGSRICG 66
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 36.7 bits (81), Expect = 0.035
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
V+VG LPS AT+ +L+ IF G + + V+ +P G+ F EY A A+ L
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRI---RKVW--VARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 387 NGYEIGG 407
+G I G
Sbjct: 60 DGSRICG 66
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 36.7 bits (81), Expect = 0.035
Identities = 24/67 (35%), Positives = 35/67 (52%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
V+VG LPS AT+ +L+ IF G + + V+ +P G+ F EY A A+ L
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRI---RKVW--VARRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 387 NGYEIGG 407
+G I G
Sbjct: 60 DGSRICG 66
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 36.7 bits (81), Expect = 0.035
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKG 329
R+VF+G LP TA ++ +FS G VL + D+ G PKG
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 361
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 36.7 bits (81), Expect = 0.035
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKG 329
R+VF+G LP TA ++ +FS G VL + D+ G PKG
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 361
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 36.7 bits (81), Expect = 0.035
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKG 329
R+VF+G LP TA ++ +FS G VL + D+ G PKG
Sbjct: 105 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 147
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 36.7 bits (81), Expect = 0.035
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKG 329
R+VF+G LP TA ++ +FS G VL + D+ G PKG
Sbjct: 319 RTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKG 361
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 36.3 bits (80), Expect = 0.047
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Frame = +3
Query: 210 FVGHLPSAATAAQLKAIFSXVG------PVLSFKLVFDRATGKPKGYGFCEYKXQETALS 371
F+G LP + A ++ I LV DR +G KG+ + ++ ++ +
Sbjct: 9 FIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNT 68
Query: 372 AMXNLNGYEIGGRSLXVDNA 431
A+ LNG + G R L V+ A
Sbjct: 69 AISGLNGADFGNRVLKVNRA 88
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 35.5 bits (78), Expect = 0.082
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +3
Query: 258 IFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNLNGYEIGGRSLXVDNACT 437
+F VGPV+ +++F+ K G+GF + + A A NG I GR + V+ A
Sbjct: 1 MFEKVGPVVDVEIIFNERGSK--GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQ 58
Query: 438 EKSRMEMQALM 470
+ + LM
Sbjct: 59 RVHNKKAKPLM 69
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 35.5 bits (78), Expect = 0.082
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
+ +FVG + L + F+ G V ++ +DR G+ +G+ F E+ E A+
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 381 NLNGYEIGGRSLXVDNACTEKSR 449
I G+S+ V A + +++
Sbjct: 89 -AREQTIKGKSVEVKPAKSRENK 110
Score = 35.1 bits (77), Expect = 0.11
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
+ VFVG LPS + L++ F G V + FD+ T + + F ++ +E+A A
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Query: 381 NLNGYEIGGRSLXVDNACTEKSR 449
G R V A + R
Sbjct: 170 QTK-QTFGTRECDVKKAVPQGKR 191
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.082
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
+ +FVG + L + F+ G V ++ +DR G+ +G+ F E+ E A+
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 381 NLNGYEIGGRSLXVDNACTEKSR 449
I G+S+ V A + +++
Sbjct: 89 -AREQTIKGKSVEVKPAKSRENK 110
Score = 35.1 bits (77), Expect = 0.11
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
+ VFVG LPS + L++ F G V + FD+ T + + F ++ +E+A A
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Query: 381 NLNGYEIGGRSLXVDNACTEKSR 449
G R V A + R
Sbjct: 170 QTK-QTFGTRECDVKKAVPQGKR 191
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.14
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+++G L S + ++ F G + L G+GF E+ + A A+ +L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDL 56
Query: 387 NGYEIGGRSLXVD 425
NG E+GG + +D
Sbjct: 57 NGKELGGERVILD 69
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 34.7 bits (76), Expect = 0.14
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+++G L S + ++ F G + L G+GF E+ + A A+ +L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDL 56
Query: 387 NGYEIGGRSLXVD 425
NG E+GG + +D
Sbjct: 57 NGKELGGERVILD 69
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.14
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
+++G L S + ++ F G + L G+GF E+ + A A+ +L
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHDL 56
Query: 387 NGYEIGGRSLXVD 425
NG E+GG + +D
Sbjct: 57 NGKELGGERVILD 69
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQET 362
+ ++V + T L F+ G V +++ D+AT KP+G+GF + ++
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQET 362
+ ++V + T L F+ G V +++ D+AT KP+G+GF + ++
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 129
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQET 362
+ ++V + T L F+ G V +++ D+AT KP+G+GF + ++
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 129
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQET 362
+ ++V + T L F+ G V +++ D+AT KP+G+GF + ++
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 33.9 bits (74), Expect = 0.25
Identities = 14/54 (25%), Positives = 28/54 (51%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQET 362
+ ++V + T L F+ G V +++ D+AT KP+G+GF + ++
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDS 167
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 33.5 bits (73), Expect = 0.33
Identities = 17/77 (22%), Positives = 37/77 (48%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R+V+VG+LP ++ +F+ + + + P Y + E+ Q + +A+
Sbjct: 163 RTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQ 222
Query: 381 NLNGYEIGGRSLXVDNA 431
N +G+E R L + ++
Sbjct: 223 N-DGFEFKERPLKIQHS 238
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 33.5 bits (73), Expect = 0.33
Identities = 17/77 (22%), Positives = 37/77 (48%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R+V+VG+LP ++ +F+ + + + P Y + E+ Q + +A+
Sbjct: 163 RTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQASVCNALQ 222
Query: 381 NLNGYEIGGRSLXVDNA 431
N +G+E R L + ++
Sbjct: 223 N-DGFEFKERPLKIQHS 238
>U55857-6|AAA98032.2| 206|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 2 protein.
Length = 206
Score = 33.5 bits (73), Expect = 0.33
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Frame = +3
Query: 195 PCRSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSA 374
P + +F +LP +ATA L+ +F+ + ++V +R G F E+ A+ A
Sbjct: 130 PNKILFCTNLPDSATAEMLEIMFNQFAGLKDIRMVPNR-----PGIAFVEFDTDSLAIPA 184
Query: 375 MXNLNGYEIGG-RSLXVDNA 431
LN ++I ++ VD A
Sbjct: 185 RTTLNNFKISAEHTMRVDYA 204
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 33.1 bits (72), Expect = 0.44
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 11/78 (14%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQL-----------KAIFSXVGPVLSFKLVFDRATGKPKGYGFCEY 347
R V+VG++P AT +L +A+FS +GP+ S + +P G+ F +
Sbjct: 17 RQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMA-----KRPPGFAFVTF 71
Query: 348 KXQETALSAMXNLNGYEI 401
K A A+ LNG +I
Sbjct: 72 KRTVHAFDAVKYLNGKKI 89
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.44
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 1/92 (1%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
V + +P +L F G VL ++ +R TG KG+ + + + A A ++
Sbjct: 34 VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESM 93
Query: 387 NGYEIGGRSLXVDNACT-EKSRMEMQALMQGP 479
NGY + + L CT K + +A+ GP
Sbjct: 94 NGYLMFEQRL----GCTVMKPELIPKAMRHGP 121
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 32.7 bits (71), Expect = 0.58
Identities = 25/82 (30%), Positives = 37/82 (45%)
Frame = +3
Query: 177 KASWXXPCRSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQ 356
K + CR +FVG+LP+ +LK +FS G + L KG+ F +
Sbjct: 109 KKKFTGRCR-LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 357 ETALSAMXNLNGYEIGGRSLXV 422
A SA ++G I GR + V
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRV 182
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 32.7 bits (71), Expect = 0.58
Identities = 25/82 (30%), Positives = 37/82 (45%)
Frame = +3
Query: 177 KASWXXPCRSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQ 356
K + CR +FVG+LP+ +LK +FS G + L KG+ F +
Sbjct: 109 KKKFTGRCR-LFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 357 ETALSAMXNLNGYEIGGRSLXV 422
A SA ++G I GR + V
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRV 182
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 31.9 bits (69), Expect = 1.0
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +3
Query: 204 SVFVGHLPSAATAAQLKAIFSXVGPVLS------FKLVFDRATGKPKGYGFCEYKXQETA 365
+VFV + + A A + +FS G + K+ DR TG+PKG + A
Sbjct: 202 TVFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITFVDASAA 261
Query: 366 LSAMXNLNGYEIGGRS 413
A+ NG G S
Sbjct: 262 QQAITMYNGQPFPGGS 277
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 31.5 bits (68), Expect = 1.3
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMX 380
R++++G +P+ T L +F+ G +K+ + KGY F E+ + A +
Sbjct: 68 RTLWIGDVPTDWTEETLSQVFTECGHA-PYKVKRVYVKDELKGYCFIEFITFDEARQTLY 126
Query: 381 NLNGYEIGG 407
+LNG I G
Sbjct: 127 DLNGNRIPG 135
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/73 (24%), Positives = 36/73 (49%)
Frame = +3
Query: 207 VFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYKXQETALSAMXNL 386
V++G LP+ A+ ++ F G + + G+GF +++ Q A A+ +L
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAVHDL 55
Query: 387 NGYEIGGRSLXVD 425
NG E+ G + ++
Sbjct: 56 NGKELCGERVILE 68
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 31.1 bits (67), Expect = 1.8
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Frame = +3
Query: 177 KASWXXPCRSVFVG--HLPSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYGFCEYK 350
K S P RS ++ LP AT + F+ G + ++ F TG+P G + E+K
Sbjct: 54 KISSGEPPRSQYIRLRGLPFNATEKDIHEFFA--GLTIE-RVKFVCTTGRPNGEAYVEFK 110
Query: 351 XQETALSAMXNLNGYEIGGRSLXVDNACTEKSRMEMQ 461
E A AM N + EI R + V +++ E +
Sbjct: 111 NTEEAGKAMEN-DRKEISNRYIEVFTVEADEAEFEFR 146
>U41536-2|AAM51501.1| 1610|Caenorhabditis elegans Kinesin-like protein
protein 4,isoform b protein.
Length = 1610
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 253 RPSSVXXAPSCLSNLSSIAQPVNPKVMGFV 342
RP+S+ P C+ L+SI P N K+ G +
Sbjct: 1496 RPTSLNLKPLCIGKLTSIISPYNDKLTGIM 1525
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 201 RSVFVGHLPSAATAAQLKAIFSXVGPVLSFKLVFD 305
R+++VG+L S T + +F+ +G V K++FD
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>U64848-12|AAY86244.1| 231|Caenorhabditis elegans Hypothetical
protein C50E3.14 protein.
Length = 231
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 225 PSAATAAQLKAIFSXVGPVLSFKLVFDRATGKPKGYG--FC 341
P+ AT L FS L FK + ATG+P G G FC
Sbjct: 152 PTTATGCDLTKNFSFRDTTLHFKAGYKWATGEPNGAGRKFC 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,577,294
Number of Sequences: 27780
Number of extensions: 362159
Number of successful extensions: 1270
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1260
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3579019094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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