Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_J16
         (1280 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0496 - 24920645-24920655,24921388-24921547,24921788-249218...    33   0.37 
05_05_0149 - 22733703-22736216                                         30   4.5  

>03_05_0496 -
           24920645-24920655,24921388-24921547,24921788-24921828,
           24922029-24922521,24923503-24923616,24925728-24925955,
           24926405-24926650,24927690-24927831,24929263-24929354
          Length = 508

 Score = 33.5 bits (73), Expect = 0.37
 Identities = 22/68 (32%), Positives = 33/68 (48%)
 Frame = +3

Query: 354 QQQPTYNMQGSVTLNPGAQGXHKGIHSAMTPTDVLIKNLQASLKLTSDETDELTENSFSI 533
           +Q+   N +   T  P AQ  HK  HS  T   +L++ L    +  +D+T+  T  S SI
Sbjct: 66  KQEKAQNAESCETSTPAAQLLHKRKHSLDTERAILVEELAVQSEPLTDDTNTQTV-SDSI 124

Query: 534 SKIADYLG 557
           S  +  LG
Sbjct: 125 SSDSTLLG 132


>05_05_0149 - 22733703-22736216
          Length = 837

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 18/89 (20%), Positives = 37/89 (41%)
 Frame = +3

Query: 582 SELLQNYMKKQPNRKSPLTELQMNKQESKYDSEPVTLLKDTKKGEXXXXXXXXXXXXXLD 761
           SE+   Y KKQ +     ++ ++ KQ+   +   V    DT   +             L 
Sbjct: 439 SEVTSQYAKKQTSDSIDGSKNEVEKQDKGSEGPLVQQHPDTNGSDGEDKILLEGYASVLQ 498

Query: 762 NVQQXQKQIPEVIITNHTVHEMEMEDMKN 848
           + +  ++++ E+  TN   H   M ++K+
Sbjct: 499 SYKGTEQKLSEIEKTNQEYHSRSMSELKD 527


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,634,872
Number of Sequences: 37544
Number of extensions: 363624
Number of successful extensions: 785
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)