Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_J16
         (1280 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    27   0.89 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    27   0.89 
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    25   3.6  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   8.3  

>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 0.89
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +3

Query: 459 IKNLQASLKLTSDETDELTENSFSISKIADYLGGKHSNVSVSELLQNYMKKQPNRKS 629
           IKN  A  +  S E+DE  E S S+  + D     + NV  +  L+    +  N  S
Sbjct: 9   IKNKGARKRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSSNADS 65


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 0.89
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +3

Query: 459 IKNLQASLKLTSDETDELTENSFSISKIADYLGGKHSNVSVSELLQNYMKKQPNRKS 629
           IKN  A  +  S E+DE  E S S+  + D     + NV  +  L+    +  N  S
Sbjct: 9   IKNKGARKRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARSSNADS 65


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 744  YSLKL*SWPSRPFSYLSGES 685
            Y L + +W + P+ YL+GES
Sbjct: 1131 YMLAVEAWDNYPYGYLNGES 1150


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 24.2 bits (50), Expect = 8.3
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 441 TPTDVLIKNLQASLKLTSDETDELTENS 524
           TP    I +L+A L+ T +E  EL+EN+
Sbjct: 89  TPNSREIIDLEAQLEKTENEIVELSENN 116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 882,364
Number of Sequences: 2352
Number of extensions: 14173
Number of successful extensions: 67
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147148920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)