Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_J16
         (1280 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010116-1|AAQ22585.1| 1083|Drosophila melanogaster AT29108p pro...    34   0.36 
AE014296-380|AAF47587.2| 1122|Drosophila melanogaster CG1828-PA,...    34   0.36 
AE014296-379|AAN11502.2| 1083|Drosophila melanogaster CG1828-PB,...    34   0.36 
AB083008-1|BAC54898.1| 1044|Drosophila melanogaster supressor of...    34   0.36 
AF023269-1|AAB80935.1| 1059|Drosophila melanogaster probable tra...    32   1.9  
AE014297-2541|AAX52964.1|  186|Drosophila melanogaster CG33541-P...    31   4.5  
AY180916-3|AAN87268.1|  994|Drosophila melanogaster ORF3 protein.      30   5.9  

>BT010116-1|AAQ22585.1| 1083|Drosophila melanogaster AT29108p
           protein.
          Length = 1083

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 23/81 (28%), Positives = 34/81 (41%)
 Frame = +3

Query: 432 SAMTPTDVLIKNLQASLKLTSDETDELTENSFSISKIADYLGGKHSNVSVSELLQNYMKK 611
           S MTP+   IKN+   +K  SDE D   + +    +  + LG    N  +   L+N +  
Sbjct: 417 SVMTPSKKKIKNVGIFIKDDSDEEDVDDKKTAKEDQGTEILGRSKRNAVLESKLRNEINT 476

Query: 612 QPNRKSPLTELQMNKQESKYD 674
           +  RK    EL     E   D
Sbjct: 477 EEKRKEHQRELAQQLNERAKD 497


>AE014296-380|AAF47587.2| 1122|Drosophila melanogaster CG1828-PA,
           isoform A protein.
          Length = 1122

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 23/81 (28%), Positives = 34/81 (41%)
 Frame = +3

Query: 432 SAMTPTDVLIKNLQASLKLTSDETDELTENSFSISKIADYLGGKHSNVSVSELLQNYMKK 611
           S MTP+   IKN+   +K  SDE D   + +    +  + LG    N  +   L+N +  
Sbjct: 417 SVMTPSKKKIKNVGIFIKDDSDEEDVDDKKTAKEDQGTEILGRSKRNAVLESKLRNEINT 476

Query: 612 QPNRKSPLTELQMNKQESKYD 674
           +  RK    EL     E   D
Sbjct: 477 EEKRKEHQRELAQQLNERAKD 497


>AE014296-379|AAN11502.2| 1083|Drosophila melanogaster CG1828-PB,
           isoform B protein.
          Length = 1083

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 23/81 (28%), Positives = 34/81 (41%)
 Frame = +3

Query: 432 SAMTPTDVLIKNLQASLKLTSDETDELTENSFSISKIADYLGGKHSNVSVSELLQNYMKK 611
           S MTP+   IKN+   +K  SDE D   + +    +  + LG    N  +   L+N +  
Sbjct: 417 SVMTPSKKKIKNVGIFIKDDSDEEDVDDKKTAKEDQGTEILGRSKRNAVLESKLRNEINT 476

Query: 612 QPNRKSPLTELQMNKQESKYD 674
           +  RK    EL     E   D
Sbjct: 477 EEKRKEHQRELAQQLNERAKD 497


>AB083008-1|BAC54898.1| 1044|Drosophila melanogaster supressor of Ty
           element 16 protein.
          Length = 1044

 Score = 34.3 bits (75), Expect = 0.36
 Identities = 23/81 (28%), Positives = 34/81 (41%)
 Frame = +3

Query: 432 SAMTPTDVLIKNLQASLKLTSDETDELTENSFSISKIADYLGGKHSNVSVSELLQNYMKK 611
           S MTP+   IKN+   +K  SDE D   + +    +  + LG    N  +   L+N +  
Sbjct: 378 SVMTPSKKKIKNVGIFIKDDSDEEDVDDKKTAKEDQGTEILGRSKRNAVLESKLRNEINT 437

Query: 612 QPNRKSPLTELQMNKQESKYD 674
           +  RK    EL     E   D
Sbjct: 438 EEKRKEHQRELAQQLNERAKD 458


>AF023269-1|AAB80935.1| 1059|Drosophila melanogaster probable
           transcriptional regulatordre4 protein.
          Length = 1059

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 22/81 (27%), Positives = 34/81 (41%)
 Frame = +3

Query: 432 SAMTPTDVLIKNLQASLKLTSDETDELTENSFSISKIADYLGGKHSNVSVSELLQNYMKK 611
           S MTP+   IKN+   +K  SDE D   + +    +  + LG   +   +   L+N +  
Sbjct: 354 SVMTPSKKKIKNVGIFIKDDSDEEDVDDKKTAKEDQGTEILGRSKAQPVLESKLRNEINT 413

Query: 612 QPNRKSPLTELQMNKQESKYD 674
           +  RK    EL     E   D
Sbjct: 414 EEKRKEHQRELAQQLNERAKD 434


>AE014297-2541|AAX52964.1|  186|Drosophila melanogaster CG33541-PA
           protein.
          Length = 186

 Score = 30.7 bits (66), Expect = 4.5
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = -2

Query: 430 CMPLXLPCAPGFKVTDPC----MLYVGCCWSLTADGTALFXAQ 314
           C+P  L  +P +++  P     +LYV CCW   A  T     Q
Sbjct: 114 CVPRCLEDSPAYRMLPPAFCCRLLYVACCWRHQATATTTAICQ 156


>AY180916-3|AAN87268.1|  994|Drosophila melanogaster ORF3 protein.
          Length = 994

 Score = 30.3 bits (65), Expect = 5.9
 Identities = 17/63 (26%), Positives = 29/63 (46%)
 Frame = +3

Query: 492 SDETDELTENSFSISKIADYLGGKHSNVSVSELLQNYMKKQPNRKSPLTELQMNKQESKY 671
           S    ELT   ++I+    Y+ GKH  V       +Y+    N  S LT ++++ +E  +
Sbjct: 412 STTEQELTAIHWAINHFRPYIYGKHFMVKSDHRPLSYLFSMKNPSSKLTRMRLDLEEYDF 471

Query: 672 DSE 680
             E
Sbjct: 472 TVE 474


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,789,705
Number of Sequences: 53049
Number of extensions: 623686
Number of successful extensions: 1742
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6906482595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)