Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_J15
         (1289 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92817-4|CAB07297.3|  633|Caenorhabditis elegans Hypothetical pr...   128   6e-30
Z74027-4|CAA98423.1|  561|Caenorhabditis elegans Hypothetical pr...   124   1e-28
Z74027-3|CAA98422.1|  557|Caenorhabditis elegans Hypothetical pr...   124   1e-28
AF022984-3|AAB69951.1|  343|Caenorhabditis elegans Hypothetical ...    31   2.3  
AL110484-4|CAB54396.2|  425|Caenorhabditis elegans Hypothetical ...    30   3.1  

>Z92817-4|CAB07297.3|  633|Caenorhabditis elegans Hypothetical protein
            W08G11.4 protein.
          Length = 633

 Score =  128 bits (310), Expect = 6e-30
 Identities = 67/153 (43%), Positives = 83/153 (54%)
 Frame = +2

Query: 584  SSGTFVDRIDPFAXXXXXXXXXXXXXXXRYRNTQDVELQALPLLKDVPSSEQEELFIRKL 763
            ++  FVD+IDPF                RY      EL  L L+KD  ++EQ  L I KL
Sbjct: 33   TANQFVDKIDPFHNKRGTSRRLRINNSSRYNVDSAQELVQLALIKDTAANEQPALVIEKL 92

Query: 764  RQCCVAFDFMDPVADLKGKEIKRATLNELVEYIHGGRGVLTEPVYPEIIKMISANLXRTL 943
             QC   FDF DPVA LK KEIKRA LNEL+++I   +G + E +YP +IKM++ N+ R L
Sbjct: 93   VQCQHVFDFYDPVAQLKCKEIKRAALNELIDHITSTKGAIVETIYPAVIKMVAKNIFRVL 152

Query: 944  XXXXXXXXXXXXXXXTLEASWPHLQLVYEFXXR 1042
                           TLE SWPHLQLVYE   R
Sbjct: 153  PPSENCEFDPEEDEPTLEVSWPHLQLVYELFLR 185


>Z74027-4|CAA98423.1|  561|Caenorhabditis elegans Hypothetical protein
            C13G3.3b protein.
          Length = 561

 Score =  124 bits (299), Expect = 1e-28
 Identities = 67/126 (53%), Positives = 82/126 (65%), Gaps = 5/126 (3%)
 Frame = +2

Query: 680  TQDVELQALPLLKDVPSSEQEELFIRKLRQCCVAFDFM-DPVADLKGKEIKRATLNELVE 856
            +Q+ ELQ LP +KD   SE+E LFI+KLRQCCV FDF  D ++DLK KE+KRA LNELV+
Sbjct: 43   SQNRELQRLPAIKDADPSERETLFIQKLRQCCVVFDFANDALSDLKFKEVKRAALNELVD 102

Query: 857  YIHGG-RGVLTEPVYPEIIKMISANLXRTL---XXXXXXXXXXXXXXXTLEASWPHLQLV 1024
            ++ G  +G L++ VYPE I M S NL R L                  TLEA+WPHLQLV
Sbjct: 103  HVSGAPKGSLSDAVYPEAIGMFSTNLFRPLSPPTNPIGAEFDPDEDEPTLEAAWPHLQLV 162

Query: 1025 YEFXXR 1042
            YEF  R
Sbjct: 163  YEFFLR 168


>Z74027-3|CAA98422.1|  557|Caenorhabditis elegans Hypothetical protein
            C13G3.3a protein.
          Length = 557

 Score =  124 bits (299), Expect = 1e-28
 Identities = 67/126 (53%), Positives = 82/126 (65%), Gaps = 5/126 (3%)
 Frame = +2

Query: 680  TQDVELQALPLLKDVPSSEQEELFIRKLRQCCVAFDFM-DPVADLKGKEIKRATLNELVE 856
            +Q+ ELQ LP +KD   SE+E LFI+KLRQCCV FDF  D ++DLK KE+KRA LNELV+
Sbjct: 39   SQNRELQRLPAIKDADPSERETLFIQKLRQCCVVFDFANDALSDLKFKEVKRAALNELVD 98

Query: 857  YIHGG-RGVLTEPVYPEIIKMISANLXRTL---XXXXXXXXXXXXXXXTLEASWPHLQLV 1024
            ++ G  +G L++ VYPE I M S NL R L                  TLEA+WPHLQLV
Sbjct: 99   HVSGAPKGSLSDAVYPEAIGMFSTNLFRPLSPPTNPIGAEFDPDEDEPTLEAAWPHLQLV 158

Query: 1025 YEFXXR 1042
            YEF  R
Sbjct: 159  YEFFLR 164


>AF022984-3|AAB69951.1|  343|Caenorhabditis elegans Hypothetical
           protein ZK488.4 protein.
          Length = 343

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
 Frame = -2

Query: 919 YHFYNFWINGLCKYTAATMNVLNKFIKCS-TFDLFAFQISNRIHEIKRHTTLSEFTDEQF 743
           +HF N W++ +  Y+    +++NKF + +    +F  QI + +       T + +     
Sbjct: 203 FHFANVWMDSIWAYSRHNESIVNKFFENNGPLSMFINQIKSTLGSSLSQLTFNIYEFSAL 262

Query: 742 LLFTAWDI 719
             F  W +
Sbjct: 263 KAFCVWKL 270


>AL110484-4|CAB54396.2|  425|Caenorhabditis elegans Hypothetical
           protein Y38E10A.5 protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 931 QICRYHF-YNFWINGLCKYTAATMNVLNKFIKCSTFD 824
           +I   HF YN++ +  C Y  +T+   N  ++ STFD
Sbjct: 318 EITSPHFPYNYYNSDFCSYQISTLGSYNVLLRFSTFD 354


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,161,026
Number of Sequences: 27780
Number of extensions: 480138
Number of successful extensions: 1158
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1153
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3610322468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)