Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_J11
(1267 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 400 e-112
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 176 6e-45
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 166 7e-42
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 159 6e-40
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 155 9e-39
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 133 6e-32
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 117 3e-27
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 107 4e-24
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 63 9e-11
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 44 4e-05
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 28 3.1
SPCC550.03c |||RNA helicase involved in mRNA catabolism|Schizosa... 27 5.5
SPBC18H10.21c ||SPBC9B6.01c|dubious|Schizosaccharomyces pombe|ch... 27 5.5
SPCC1620.03 |mug163||sequence orphan|Schizosaccharomyces pombe|c... 27 7.3
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 400 bits (985), Expect = e-112
Identities = 184/298 (61%), Positives = 235/298 (78%)
Frame = +1
Query: 118 QQPILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDG 297
Q P+ V++ N R+ G K Q+ NI A K +ADVIRTCLGP+AMLKML+DP+G +++TNDG
Sbjct: 2 QSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDG 61
Query: 298 NAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVII 477
+AILREI V HPAAKSMIE+ARTQDEEVGDGTTSVI+LAGE+LA A P L + IHP V+I
Sbjct: 62 HAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMI 121
Query: 478 REYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNT 657
R ++QALEDA+ ++ D+I++PV+++D +M +IR+C+GTK + RW T
Sbjct: 122 RSFKQALEDALSII-DEITLPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRT 180
Query: 658 VTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLD 837
V NGR+E+DIK YA+VEK+PGG +E S VL GVM NKDVTHPKMRR IENPRI+LLD
Sbjct: 181 VASTSNGRMEIDIKRYARVEKVPGGEIESSCVLDGVMLNKDVTHPKMRRRIENPRIVLLD 240
Query: 838 CPLEYKKGESQTNIEIMGEQDFTKLLQLEEXHVQRQCEEIIALKPDMVFTEKGVSDLA 1011
CPLEY+KGESQTNIEI + D+ ++L++EE V+R C+ IIA+KPD+V TEKGVSDLA
Sbjct: 241 CPLEYRKGESQTNIEISKDTDWNRILEIEEEQVKRMCDYIIAVKPDLVITEKGVSDLA 298
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 176 bits (428), Expect = 6e-45
Identities = 96/302 (31%), Positives = 168/302 (55%), Gaps = 4/302 (1%)
Frame = +1
Query: 118 QQPILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDG 297
Q P++VL + T GR L NI+A + D IRT LGP K+++D G +V++NDG
Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 298 NAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVII 477
I++ + + HPAAK++++IAR QD EVGDGTTSV+V AGE+L A F+ + +II
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLII 126
Query: 478 REYRQALEDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRW-XXXXXXXXXXXXN 654
R YR+A + A+ +++ I++ +DL+D K+++++ C T + +
Sbjct: 127 RGYRKAAQLAVNKIKE-IAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVD 185
Query: 655 TVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTH---PKMRRYIENPRI 825
V D + +N ++K+PGG +E+S ++ GV F K ++ + ++ +NP+I
Sbjct: 186 AVLTLDQEDLN---ENMIGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKI 242
Query: 826 ILLDCPLEYKKGESQTNIEIMGEQDFTKLLQLEEXHVQRQCEEIIALKPDMVFTEKGVSD 1005
+ LD LE K + + + Q++ ++ E + + E I+A +V ++ + D
Sbjct: 243 LCLDVELELKAEKDNAEVRVDKVQEYQNIVDAEWRIIFSKLEAIVATGAKVVLSKLPIGD 302
Query: 1006 LA 1011
LA
Sbjct: 303 LA 304
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 166 bits (403), Expect = 7e-42
Identities = 99/303 (32%), Positives = 169/303 (55%), Gaps = 3/303 (0%)
Frame = +1
Query: 115 GQQPILVLSQNTKRE-SGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTN 291
G ILV Q KR G +I A KT+A+++RT LGP+ + K+L+ P G I +TN
Sbjct: 15 GNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTN 74
Query: 292 DGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTV 471
DG IL ++ V+H AK +++++++QD+E+GDGTT V+VLAG +L AE + + IHP
Sbjct: 75 DGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIR 134
Query: 472 IIREYRQALEDAIVLLQDKISVPVDLNDRD--KMKEVIRSCVGTKYIGRWXXXXXXXXXX 645
I Y +A + A+ L D IS VD + + + ++ +G+K + +
Sbjct: 135 IADGYEKACQVAVKHL-DAISDVVDFSPENTTNLFRSAKTSLGSKVVSK--AHDHFANIA 191
Query: 646 XXNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRI 825
++V D R +VD + KV+ GG+V++++++ GV+ +KD++HP+M IEN +I
Sbjct: 192 VDAVLSVADLQRKDVDFE-LIKVDGKVGGSVDDTKLVKGVVVDKDMSHPQMPHRIENAKI 250
Query: 826 ILLDCPLEYKKGESQTNIEIMGEQDFTKLLQLEEXHVQRQCEEIIALKPDMVFTEKGVSD 1005
+L CP E K +++ ++I +F L E+ Q + + ++V + G D
Sbjct: 251 AILTCPFEPPKPKTKHKLDITSVSEFEALQAYEKEKFQEMIKHVKDAGANLVICQWGFDD 310
Query: 1006 LAH 1014
A+
Sbjct: 311 EAN 313
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 159 bits (387), Expect = 6e-40
Identities = 89/284 (31%), Positives = 150/284 (52%), Gaps = 1/284 (0%)
Frame = +1
Query: 160 SGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAA 339
SG V+ +N+ A IA+V+++ LGP + KML+D +G + +TNDG IL + V+HPA
Sbjct: 18 SGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAG 77
Query: 340 KSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLL 519
K ++E+A+ QD+EVGDGTTSV+++A E+L A + IHPT II YR A+ +A+ +
Sbjct: 78 KVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFM 137
Query: 520 QDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTV-TVNDNGRIEVDI 696
D +S VD ++ + V ++ + +K IG +V T N G +
Sbjct: 138 TDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPV 197
Query: 697 KNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTN 876
K + K G + ES ++ G N + M+ ++N +I +LD L+ K +
Sbjct: 198 K-AVNILKAHGKSSRESVLVKGYALNCTIASQAMKTRVQNAKIAVLDMDLQKTKMALGVH 256
Query: 877 IEIMGEQDFTKLLQLEEXHVQRQCEEIIALKPDMVFTEKGVSDL 1008
+ I K+ + E + ++I+ +++ T KG+ DL
Sbjct: 257 VTIDDPDQLEKIREREVMITLERVKKILNAGANVILTTKGIDDL 300
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 155 bits (377), Expect = 9e-39
Identities = 83/283 (29%), Positives = 156/283 (55%), Gaps = 1/283 (0%)
Frame = +1
Query: 154 RESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHP 333
RE ++V+L NI A +++AD IRT LGP+ M KM+ G +++TNDG IL+ ++V HP
Sbjct: 14 REKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHP 73
Query: 334 AAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIV 513
AAK +++++ QD E GDGTTSV++LAG MLA AE L + IHPTVI +++A +
Sbjct: 74 AAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVD 133
Query: 514 LLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNGRIEVD 693
+++ ++ ++L+DR+ + + + +K + ++ V ++ VD
Sbjct: 134 CMKEN-ALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKV-IDPRVATNVD 191
Query: 694 IKNYAKVEKIPGGTVEESRVLSGVMFNKD-VTHPKMRRYIENPRIILLDCPLEYKKGESQ 870
+K+ V+K+ GG ++++ ++ G+ + V IE I L+ L K + +
Sbjct: 192 LKDIRIVKKL-GGIIDDTELIPGLALTQTAVKSAGGPTRIEKANIALIQFQLSPPKPDME 250
Query: 871 TNIEIMGEQDFTKLLQLEEXHVQRQCEEIIALKPDMVFTEKGV 999
+ + + K+L+ E ++ C++I +++ +K +
Sbjct: 251 NQVVVNDYRQMDKILKEERQYLLNMCKKIKKAGANVILIQKSI 293
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 133 bits (321), Expect = 6e-32
Identities = 78/280 (27%), Positives = 145/280 (51%), Gaps = 2/280 (0%)
Frame = +1
Query: 145 NTKRESGRKVQL--ENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREI 318
N K ES ++ Q NISA + DV+++ LGP KML+D G I +T DG +L E+
Sbjct: 6 NPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEM 65
Query: 319 TVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQAL 498
+Q+P A + + A QD+ GDGTTSV +L GE+L AE ++ + +HP++I + A
Sbjct: 66 QIQNPTASCIAKAATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAK 125
Query: 499 EDAIVLLQDKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNG 678
+A+ L D ++ DR+ + V ++ + TK + T+ D
Sbjct: 126 NEALTFL-DSFKTDFEV-DREVLLNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPDE- 182
Query: 679 RIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKK 858
+D+ + ++ K+ + +++++ G++ + HP M + ++N I++L+ LEY+K
Sbjct: 183 --PIDL-HMVEIMKMQNRSASDTQLIRGLLLDHGARHPDMPKQVKNAYILILNVSLEYEK 239
Query: 859 GESQTNIEIMGEQDFTKLLQLEEXHVQRQCEEIIALKPDM 978
E + + +L++ E V + +I+ LK ++
Sbjct: 240 SEINSGFFYSTSEQRERLVESERKFVDNKLRKIVELKKEV 279
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit Cct8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 117 bits (282), Expect = 3e-27
Identities = 72/278 (25%), Positives = 139/278 (50%), Gaps = 1/278 (0%)
Frame = +1
Query: 178 LENISAGKTIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEI 357
+ N +A + ++++ RT LGP K++++ + +TND I+RE+ V HPAAK +++
Sbjct: 29 IRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLVVDA 88
Query: 358 ARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQDKISV 537
+ Q+ E+GD V+V GE+LA AE + + P I + Y AL + +L++ +
Sbjct: 89 TQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICAD 148
Query: 538 PVDLNDRDK-MKEVIRSCVGTKYIGRWXXXXXXXXXXXXNTVTVNDNGRIEVDIKNYAKV 714
++ + +K + + IR+C+ +K G TV D + VD +V
Sbjct: 149 KIETVESEKELIKAIRTCISSKQYGN-EDFLSDLVAKAILTVLPKDPSKFNVD---NIRV 204
Query: 715 EKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGESQTNIEIMGE 894
KI G ++ S+V+ G++F ++ R + ++ + CPL+ + E++ + +
Sbjct: 205 VKIMGSSLYNSQVVKGMVFPREPEGTVTRS--KEAKVAVFSCPLDISQTETKGTVLLHNA 262
Query: 895 QDFTKLLQLEEXHVQRQCEEIIALKPDMVFTEKGVSDL 1008
Q+ + EE ++ +EI +V T V+DL
Sbjct: 263 QEMLDFSKGEENLIESHIKEIYDAGVRVVVTSGNVNDL 300
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 107 bits (256), Expect = 4e-24
Identities = 74/250 (29%), Positives = 127/250 (50%), Gaps = 5/250 (2%)
Frame = +1
Query: 124 PILVLSQNTKRESGRKVQLENISAGKTIADVIRTCLGPQAMLKMLM-DPMGGIVMTNDGN 300
P + +++ +E G +L + + D++++ LGP+ M K+L + G IV+TNDG
Sbjct: 5 PHQIFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGA 64
Query: 301 AILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIR 480
IL+ I + + AAK ++ I++ QD+EVGDGTTSV V A E+L AE + IHP VII
Sbjct: 65 TILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIID 124
Query: 481 EYRQALEDAIVLLQ----DKISVPVDLNDRDKMKEVIRSCVGTKYIGRWXXXXXXXXXXX 648
YR A + AI L+ D S P R ++ + R+ + +K + +
Sbjct: 125 GYRIATKTAIDALRASSIDNSSDPAKF--RSDLENIARTTLSSKILSQ----NKNHFAQL 178
Query: 649 XNTVTVNDNGRIEVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRII 828
+ G +D ++ KI GG +++S + G + NK + + +EN I+
Sbjct: 179 AVDAVLRLKGSTNLD---NIQIIKILGGKLDDSFLDEGFILNKTI-GVNCPKVMENANIL 234
Query: 829 LLDCPLEYKK 858
+ + ++ K
Sbjct: 235 IANTAMDTDK 244
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 62.9 bits (146), Expect = 9e-11
Identities = 30/109 (27%), Positives = 60/109 (55%)
Frame = +1
Query: 685 EVDIKNYAKVEKIPGGTVEESRVLSGVMFNKDVTHPKMRRYIENPRIILLDCPLEYKKGE 864
++D+++Y K++KIPGG++++ +++GV+F+K + M R + PRI LL L+Y E
Sbjct: 518 DIDVRSYVKIKKIPGGSIQDCFLVNGVLFSKKASSKSMDRSLRRPRIALLTFSLDYACDE 577
Query: 865 SQTNIEIMGEQDFTKLLQLEEXHVQRQCEEIIALKPDMVFTEKGVSDLA 1011
+ ++ +E ++ I LKP++VF + + +A
Sbjct: 578 QRI-------LSLDLIISQQEEYIINLVNRICMLKPNLVFAQGQIPSIA 619
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 44.0 bits (99), Expect = 4e-05
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +1
Query: 202 TIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITV----QHPAAKSMIEIARTQ 369
T+A + LGP+ ++ P G +T DG + R +++ ++ A+ + ++A
Sbjct: 53 TLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFENLGARLVQDVASKT 112
Query: 370 DEEVGDGTTSVIVLAGEMLAIAEPFLTQNIHPTVIIREYRQALEDAIVLLQ 522
+E GDGTT+ VL + + + +P + R + A+++ + LQ
Sbjct: 113 NEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFLQ 163
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 27.9 bits (59), Expect = 3.1
Identities = 23/90 (25%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Frame = +3
Query: 249 KNVNGPY---GRHRDDQRW*CYTQGNHSPTSSCKIYDRNRKDPR*RGWRWNHISHSASRR 419
KN NG Y R D+ W T+ PTS + +K P + WN + A
Sbjct: 421 KNENGIYDKKARSVSDEAWSFITKCLTEPTSRFQSTIEIQKHPFFKRLHWNGLRKRAVPP 480
Query: 420 NVGDCRTLLDTEYSSNSHH*RIPPSFRGCY 509
V LDT Y + + ++ +++ Y
Sbjct: 481 FVPRLENQLDTSYFDDFNDEQVLDAYKDVY 510
>SPCC550.03c |||RNA helicase involved in mRNA
catabolism|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1213
Score = 27.1 bits (57), Expect = 5.5
Identities = 23/63 (36%), Positives = 27/63 (42%)
Frame = +1
Query: 805 YIENPRIILLDCPLEYKKGESQTNIEIMGEQDFTKLLQLEEXHVQRQCEEIIALKPDMVF 984
YI+ R +LL KG I E T+L+ LE CEE IAL VF
Sbjct: 1032 YIDAERTVLL-------KGRVACEINSTSELVLTELI-LENSLADFSCEETIALLSAFVF 1083
Query: 985 TEK 993
EK
Sbjct: 1084 DEK 1086
>SPBC18H10.21c ||SPBC9B6.01c|dubious|Schizosaccharomyces pombe|chr
2|||Manual
Length = 157
Score = 27.1 bits (57), Expect = 5.5
Identities = 18/41 (43%), Positives = 19/41 (46%)
Frame = -2
Query: 189 NIFKLNFPAGLTFCILAEN*YRLLSIHFEKIKCVLLFKLQK 67
N KL F L C L Y SIH IK +L KLQK
Sbjct: 113 NCNKLQFQISLLRCCLRIVPYSAESIHGRIIKLLLYTKLQK 153
>SPCC1620.03 |mug163||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 186
Score = 26.6 bits (56), Expect = 7.3
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 925 EXHVQRQCEEIIALKPDMV 981
E + RQCE+I ALKPD +
Sbjct: 167 ERNRSRQCEKISALKPDPI 185
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,647,783
Number of Sequences: 5004
Number of extensions: 92726
Number of successful extensions: 243
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 687563588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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