Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_J09
         (1278 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662...    43   5e-04
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36...    40   0.004
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753...    39   0.010
10_05_0046 + 8516043-8516425,8517908-8518019,8518276-8518377,851...    33   0.48 
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418...    33   0.64 

>03_02_0234 +
           6625417-6626184,6626314-6626339,6626435-6626531,
           6627009-6627116,6627194-6627328,6627429-6627528,
           6627763-6627974,6628060-6628125,6628231-6628464,
           6628583-6628641,6628716-6628782,6628863-6629192,
           6629267-6629335,6629417-6629503,6629605-6629692,
           6630057-6630178,6630251-6630355,6630442-6630485,
           6630558-6630627,6630711-6630814,6630980-6631189,
           6632935-6633018,6633291-6634003,6634115-6634649,
           6634703-6634789,6634826-6634970,6635049-6635125,
           6635215-6635359,6635462-6635626,6635725-6635958
          Length = 1761

 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
 Frame = +3

Query: 630 YEVERILEVHH---KKNGKRE--FLIHWKGWSSKFDSWEPESNL-NCSELIKKFMDK 782
           ++VE +LE+ +      GK    F + WKG+   +D+WEP   L +C E IK+F++K
Sbjct: 558 FDVEELLEICYGDPSNTGKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEK 614



 Score = 39.5 bits (88), Expect = 0.006
 Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +3

Query: 381 KGKLHYLIRWKGYSADSDTWXPEQTLS-CPELIGKF 485
           K  L + +RWKGY    DTW P   LS CPE I +F
Sbjct: 576 KNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEF 611


>10_01_0028 -
           359988-359996,360228-360332,360415-360536,360676-360763,
           360988-361056,361132-361461,361544-361610,361695-361753,
           361838-362056,362224-362289,362370-362500,362683-362782,
           362864-363001,363111-363218,363627-363723,363806-364257
          Length = 719

 Score = 39.9 bits (89), Expect = 0.004
 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
 Frame = +3

Query: 618 ENAEYEVERILEVHHKKNGKRE---FLIHWKGWSSKFDSWEPESNL-NCSELIKKFMDK 782
           E  E+ VE++  + +  +G+ +   F + WKG+  + D+WEP  NL +C   IK+F+ +
Sbjct: 411 EKDEFVVEKLAGICYGGSGREDGLYFKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQE 469



 Score = 36.7 bits (81), Expect = 0.039
 Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = +3

Query: 390 LHYLIRWKGYSADSDTWXPEQTL-SCPELIGKF 485
           L++ ++WKGY  + DTW P + L  CP  I +F
Sbjct: 434 LYFKVQWKGYGREEDTWEPIENLRDCPLKIKEF 466


>05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,
            7535889-7535932,7536042-7536146,7536223-7536344,
            7536807-7536894,7536966-7537052,7537718-7537786,
            7537859-7538188,7539777-7539824,7540003-7540069,
            7540150-7540208,7541220-7541453,7541536-7541601,
            7541684-7541883,7542104-7542197,7542295-7542414,
            7542596-7542703,7542808-7542871,7543378-7543409,
            7546049-7548007
          Length = 1407

 Score = 38.7 bits (86), Expect = 0.010
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
 Frame = +3

Query: 684  FLIHWKGWSSKFDSWEPESNL-NCSELIKKFMDKVSSARSL--DSRNLRVAPETTNRFTL 854
            F + WKG+    D+WEP   L NC E I+ F+ +    R L    RN+ V     ++F L
Sbjct: 958  FKVRWKGYGPHHDTWEPVEGLRNCKEAIRDFVIEGHRQRILPRPRRNIAVFLLRPSKFPL 1017

Query: 855  QD 860
             D
Sbjct: 1018 GD 1019



 Score = 37.5 bits (83), Expect = 0.022
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +3

Query: 369  SKQLKGKLHYLIRWKGYSADSDTWXPEQTL-SCPELIGKF 485
            +K  K  L++ +RWKGY    DTW P + L +C E I  F
Sbjct: 949  NKVSKHGLYFKVRWKGYGPHHDTWEPVEGLRNCKEAIRDF 988


>10_05_0046 +
           8516043-8516425,8517908-8518019,8518276-8518377,
           8518605-8518657,8518976-8519062,8519162-8519830,
           8520154-8520214,8520295-8520342
          Length = 504

 Score = 33.1 bits (72), Expect = 0.48
 Identities = 35/150 (23%), Positives = 58/150 (38%), Gaps = 2/150 (1%)
 Frame = +3

Query: 381 KGKLHYLIRWKGYSADSDTWXPEQTLSCPELIGKFXXXXXXXXXXXRKPSAALXXXXXXX 560
           KGKL YL++W G   +   W     L+ PEL G+             + +  L       
Sbjct: 119 KGKLQYLVKW-GSQWEGGAWD----LAAPELSGRIRTEDWKDQ---EEITYCLPKQVRVD 170

Query: 561 XXXXXXXXRAKSQWDTS-ADENAEYEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPE 737
                   R +   DT  A     +  E   E   +   +++     +GW    ++WEP 
Sbjct: 171 VDHVVKVPRLRMAVDTHIAIFGTIHLYEFSYEDQEQDCVQKKQQYGRRGWPESANTWEPL 230

Query: 738 SNLN-CSELIKKFMDKVSSARSLDSRNLRV 824
            NL+ CS++I  F  ++ S R    R  ++
Sbjct: 231 ENLSACSDIIDAFEMRLQSPRPGRKRKRKI 260


>06_01_0584 -
           4178391-4178732,4178854-4178915,4180361-4180481,
           4180592-4180732,4180830-4180959,4182306-4182436,
           4182528-4182601,4182680-4182741,4183135-4183209,
           4184658-4184760,4184835-4184991,4185549-4185743,
           4186204-4186282,4186697-4186806,4187249-4187374,
           4187475-4187541,4187622-4187791,4187880-4188018,
           4188361-4188522,4188672-4188772,4188852-4188994,
           4189438-4189537,4190364-4190414,4191062-4191169,
           4191279-4191494,4191585-4191721,4191820-4191915,
           4192017-4192234,4192764-4192925,4193006-4193163,
           4194221-4194379
          Length = 1364

 Score = 32.7 bits (71), Expect = 0.64
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +3

Query: 591 KSQWDTSADENAEYEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNL 746
           KS  D SA       V+RIL       G+RE+ + WK  +    +WE +S++
Sbjct: 138 KSDDDYSAIRPEWTTVDRILATRKSSTGEREYYVKWKELTYDECTWENDSDI 189


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,973,620
Number of Sequences: 37544
Number of extensions: 337378
Number of successful extensions: 746
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)