Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_J09
(1278 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 53 4e-07
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 51 2e-06
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 51 2e-06
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 51 2e-06
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 51 2e-06
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 51 2e-06
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 46 8e-05
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 46 8e-05
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 45 1e-04
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 40 0.005
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 37 0.035
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 35 0.11
AL032626-25|CAH10813.1| 406|Caenorhabditis elegans Hypothetical... 32 1.0
AL032626-24|CAA21530.1| 499|Caenorhabditis elegans Hypothetical... 32 1.0
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 31 1.8
AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical... 31 2.3
AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical ... 31 2.3
U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase prot... 29 9.3
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 53.2 bits (122), Expect = 4e-07
Identities = 26/63 (41%), Positives = 37/63 (58%)
Frame = +3
Query: 612 ADENAEYEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKFMDKVSS 791
AD + Y VE ILE H KK GK EF I W G+ +SWEP+ N+ LI+ F + ++
Sbjct: 2 ADGSELYTVESILE-HRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAFFTREAA 60
Query: 792 ARS 800
++
Sbjct: 61 RKA 63
Score = 38.7 bits (86), Expect = 0.009
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +3
Query: 360 ILDSKQLKGKLHYLIRWKGYSADSDTWXPEQTLSCPELIGKF 485
IL+ ++ KGK + I+W GY ++W P++ + P LI F
Sbjct: 13 ILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIEAF 54
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 51.2 bits (117), Expect = 2e-06
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 630 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKF 773
+ VE++L+ K G+ EFLI W+G+ SWEP NL C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
Score = 38.7 bits (86), Expect = 0.009
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 357 QILDSKQLK-GKLHYLIRWKGYSADSDTWXPEQTLSCPELIGKF 485
++LD + K G+ +LI+W+G+ +W P + L C E++ +F
Sbjct: 23 KVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 51.2 bits (117), Expect = 2e-06
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 630 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKF 773
+ VE++L+ K G+ EFLI W+G+ SWEP NL C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
Score = 38.7 bits (86), Expect = 0.009
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 357 QILDSKQLK-GKLHYLIRWKGYSADSDTWXPEQTLSCPELIGKF 485
++LD + K G+ +LI+W+G+ +W P + L C E++ +F
Sbjct: 23 KVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 51.2 bits (117), Expect = 2e-06
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 630 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKF 773
+ VE++L+ K G+ EFLI W+G+ SWEP NL C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
Score = 38.7 bits (86), Expect = 0.009
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 357 QILDSKQLK-GKLHYLIRWKGYSADSDTWXPEQTLSCPELIGKF 485
++LD + K G+ +LI+W+G+ +W P + L C E++ +F
Sbjct: 23 KVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 51.2 bits (117), Expect = 2e-06
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 630 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKF 773
+ VE++L+ K G+ EFLI W+G+ SWEP NL C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
Score = 38.7 bits (86), Expect = 0.009
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 357 QILDSKQLK-GKLHYLIRWKGYSADSDTWXPEQTLSCPELIGKF 485
++LD + K G+ +LI+W+G+ +W P + L C E++ +F
Sbjct: 23 KVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 51.2 bits (117), Expect = 2e-06
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 630 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKF 773
+ VE++L+ K G+ EFLI W+G+ SWEP NL C E++ +F
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
Score = 38.7 bits (86), Expect = 0.009
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 357 QILDSKQLK-GKLHYLIRWKGYSADSDTWXPEQTLSCPELIGKF 485
++LD + K G+ +LI+W+G+ +W P + L C E++ +F
Sbjct: 23 KVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCVEMLDEF 66
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 45.6 bits (103), Expect = 8e-05
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +3
Query: 630 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKFMDKVSSARSLDS 809
+ VE++L + G E+ I W+G+ SWEP NL C +I+++ +K ++ R+
Sbjct: 37 FVVEKVLNKRLTRGGS-EYYIKWQGFPESECSWEPIENLQCDRMIQEY-EKEAAKRTTRK 94
Query: 810 RNLRVAPETTNRFTLQ 857
R P T++ LQ
Sbjct: 95 RRYSPQPSTSSSAELQ 110
Score = 35.1 bits (77), Expect = 0.11
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 357 QILDSKQLKGKLHYLIRWKGYSADSDTWXPEQTLSCPELIGKF 485
++L+ + +G Y I+W+G+ +W P + L C +I ++
Sbjct: 41 KVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEY 83
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 45.6 bits (103), Expect = 8e-05
Identities = 23/76 (30%), Positives = 40/76 (52%)
Frame = +3
Query: 630 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLNCSELIKKFMDKVSSARSLDS 809
+ VE++L + G E+ I W+G+ SWEP NL C +I+++ +K ++ R+
Sbjct: 37 FVVEKVLNKRLTRGGS-EYYIKWQGFPESECSWEPIENLQCDRMIQEY-EKEAAKRTTRK 94
Query: 810 RNLRVAPETTNRFTLQ 857
R P T++ LQ
Sbjct: 95 RRYSPQPSTSSSAELQ 110
Score = 35.1 bits (77), Expect = 0.11
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 357 QILDSKQLKGKLHYLIRWKGYSADSDTWXPEQTLSCPELIGKF 485
++L+ + +G Y I+W+G+ +W P + L C +I ++
Sbjct: 41 KVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQEY 83
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 648 LEVHHKKNGKREFLIHWKGWSSKFDSWEPESNL-NCSELIKKFMDK 782
+E +++ K +L+HW+G+ K +WEPE NL NC EL +KF ++
Sbjct: 39 VEYDKRRHSKYAYLVHWRGYDWKERTWEPEENLENCEEL-QKFKER 83
Score = 35.9 bits (79), Expect = 0.062
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 372 KQLKGKLHYLIRWKGYSADSDTWXPEQTL-SCPEL 473
K+ K YL+ W+GY TW PE+ L +C EL
Sbjct: 43 KRRHSKYAYLVHWRGYDWKERTWEPEENLENCEEL 77
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Frame = +3
Query: 609 SADENAEYEVERILEVHHKKNGKREFLIHWKG-----WSSKFDSWEPESNLNCSELIKKF 773
S D + EY VER+L H K G +L+ WKG W+S + WE + + NC +L+ +
Sbjct: 80 SDDSSGEYAVERVL-AHRKVKGSPLYLVQWKGYPHPVWNS--EMWEEDLD-NCKDLLAAY 135
Score = 29.9 bits (64), Expect = 4.0
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +3
Query: 357 QILDSKQLKGKLHYLIRWKGYSA---DSDTWXPEQTLSCPELIGKF 485
++L +++KG YL++WKGY +S+ W E +C +L+ +
Sbjct: 91 RVLAHRKVKGSPLYLVQWKGYPHPVWNSEMW-EEDLDNCKDLLAAY 135
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 36.7 bits (81), Expect = 0.035
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +3
Query: 357 QILDSKQLKGKLHYLIRWKGYSADSDTWXPEQTL 458
+IL K L +RW GY AD DTW PE+ L
Sbjct: 28 KILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDL 61
Score = 35.1 bits (77), Expect = 0.11
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +3
Query: 630 YEVERILEVHHKKNGKREFLIHWKGWSSKFDSWEPESNLN--CSELIKKFMDKV 785
+EVE+IL H + + W G+ + D+WEPE +L SE++ ++ K+
Sbjct: 24 FEVEKIL-AHKVTDNLLVLQVRWLGYGADEDTWEPEEDLQECASEVVAEYYKKL 76
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 35.1 bits (77), Expect = 0.11
Identities = 18/54 (33%), Positives = 32/54 (59%)
Frame = +3
Query: 684 FLIHWKGWSSKFDSWEPESNLNCSELIKKFMDKVSSARSLDSRNLRVAPETTNR 845
FL+ W G+ +K +WEPESN+ S + ++ K + ++ NL+V+ T+R
Sbjct: 95 FLVKWLGYGNKEMTWEPESNIPDSVYLYEY--KKLNNMVMNRMNLKVSLTFTSR 146
Score = 28.7 bits (61), Expect = 9.3
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +3
Query: 375 QLKGKLHYLIRWKGYSADSDTWXPEQTL 458
QL +L++W GY TW PE +
Sbjct: 88 QLISNYFFLVKWLGYGNKEMTWEPESNI 115
>AL032626-25|CAH10813.1| 406|Caenorhabditis elegans Hypothetical
protein Y37D8A.11b protein.
Length = 406
Score = 31.9 bits (69), Expect = 1.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 645 ILEVHHKKNGKREFLIHWKGWSSKFDSWEP 734
I ++ K+GK + IH+KGW++++D P
Sbjct: 251 ITDIKPDKDGKECYCIHFKGWNNRYDEQIP 280
Score = 29.9 bits (64), Expect = 4.0
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +3
Query: 645 ILEVHHKKNGKREFLIHWKGWSSKFD 722
I+ + + + GK + +H+KGW+ ++D
Sbjct: 30 IIGIENNREGKECYCVHFKGWNCRYD 55
Score = 29.5 bits (63), Expect = 5.3
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 645 ILEVHHKKNGKREFLIHWKGWSSKFDSWEP 734
I+++ +GK + +H+KGW+S++D P
Sbjct: 353 IVDIITDTDGKDFYCVHFKGWNSRYDEKIP 382
>AL032626-24|CAA21530.1| 499|Caenorhabditis elegans Hypothetical
protein Y37D8A.11a protein.
Length = 499
Score = 31.9 bits (69), Expect = 1.0
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 645 ILEVHHKKNGKREFLIHWKGWSSKFDSWEP 734
I ++ K+GK + IH+KGW++++D P
Sbjct: 344 ITDIKPDKDGKECYCIHFKGWNNRYDEQIP 373
Score = 29.9 bits (64), Expect = 4.0
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = +3
Query: 645 ILEVHHKKNGKREFLIHWKGWSSKFD 722
I+ + + + GK + +H+KGW+ ++D
Sbjct: 30 IIGIENNREGKECYCVHFKGWNCRYD 55
Score = 29.5 bits (63), Expect = 5.3
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +3
Query: 645 ILEVHHKKNGKREFLIHWKGWSSKFDSWEP 734
I+++ +GK + +H+KGW+S++D P
Sbjct: 446 IVDIITDTDGKDFYCVHFKGWNSRYDEKIP 475
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 31.1 bits (67), Expect = 1.8
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 675 KREFLIHWKGWSSKFDSWEPESNL 746
+++F + W GWS ++WE E++L
Sbjct: 236 EQQFFVKWTGWSHLHNTWESENSL 259
>AL032626-28|CAO82072.1| 337|Caenorhabditis elegans Hypothetical
protein Y37D8A.9b protein.
Length = 337
Score = 30.7 bits (66), Expect = 2.3
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +3
Query: 642 RILEVHHKKNGKREFLIHWKGWSSKFDSWEP 734
+I ++ +GK + +H+KGW++++D P
Sbjct: 25 KITDIKTNSDGKELYCVHFKGWNNRYDEKIP 55
>AL032626-8|CAA21528.1| 335|Caenorhabditis elegans Hypothetical
protein Y37D8A.9a protein.
Length = 335
Score = 30.7 bits (66), Expect = 2.3
Identities = 9/31 (29%), Positives = 20/31 (64%)
Frame = +3
Query: 642 RILEVHHKKNGKREFLIHWKGWSSKFDSWEP 734
+I ++ +GK + +H+KGW++++D P
Sbjct: 25 KITDIKTNSDGKELYCVHFKGWNNRYDEKIP 55
>U97407-6|AAB52481.1| 751|Caenorhabditis elegans Tyrosinase protein
4 protein.
Length = 751
Score = 28.7 bits (61), Expect = 9.3
Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = +2
Query: 170 CRSNCAGA-PNCRXCXCCKRXSXQCCFFXXFQSXSKRQIWQRXNKAKSSGKSQKCR 334
C+++C P R C QC + +K Q+W N KS K + R
Sbjct: 485 CKASCGVCKPKYRLADDCTDRHTQCSSWSRSGECTKNQLWMTENCRKSCNKCGRSR 540
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,247,331
Number of Sequences: 27780
Number of extensions: 305257
Number of successful extensions: 776
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 775
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3568584636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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