Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_J07
(1296 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 271 4e-72
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 271 4e-72
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 271 4e-72
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 271 4e-72
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 271 4e-72
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 271 4e-72
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 93 2e-18
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 32 4.0
BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 32 4.0
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 31 6.9
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 31 6.9
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 31 6.9
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 31 6.9
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 31 9.2
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 31 9.2
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 31 9.2
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 31 9.2
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 31 9.2
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 31 9.2
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 31 9.2
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 31 9.2
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 31 9.2
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 31 9.2
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 271 bits (664), Expect = 4e-72
Identities = 131/169 (77%), Positives = 152/169 (89%), Gaps = 1/169 (0%)
Frame = +2
Query: 125 ISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRE 301
ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRE
Sbjct: 23 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 82
Query: 302 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 481
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 83 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 142
Query: 482 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 628
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 271 bits (664), Expect = 4e-72
Identities = 131/169 (77%), Positives = 152/169 (89%), Gaps = 1/169 (0%)
Frame = +2
Query: 125 ISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRE 301
ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRE
Sbjct: 21 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 80
Query: 302 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 481
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 81 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 140
Query: 482 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 628
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 141 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 271 bits (664), Expect = 4e-72
Identities = 131/169 (77%), Positives = 152/169 (89%), Gaps = 1/169 (0%)
Frame = +2
Query: 125 ISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRE 301
ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRE
Sbjct: 23 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 82
Query: 302 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 481
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 83 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 142
Query: 482 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 628
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 271 bits (664), Expect = 4e-72
Identities = 131/169 (77%), Positives = 152/169 (89%), Gaps = 1/169 (0%)
Frame = +2
Query: 125 ISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRE 301
ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRE
Sbjct: 23 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 82
Query: 302 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 481
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 83 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 142
Query: 482 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 628
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 271 bits (664), Expect = 4e-72
Identities = 131/169 (77%), Positives = 152/169 (89%), Gaps = 1/169 (0%)
Frame = +2
Query: 125 ISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRE 301
ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRE
Sbjct: 23 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 82
Query: 302 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 481
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 83 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 142
Query: 482 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 628
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 271 bits (664), Expect = 4e-72
Identities = 131/169 (77%), Positives = 152/169 (89%), Gaps = 1/169 (0%)
Frame = +2
Query: 125 ISQALVELETNSDLKAQLRELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRE 301
ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRE
Sbjct: 23 ISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRE 82
Query: 302 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFPAEIVGK 481
LEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDLVFP+EIVGK
Sbjct: 83 LEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGK 142
Query: 482 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFQSVYKKLTGREVTFEFPE 628
RIRVKLDGS+LIKVHLDK QQ +EHKV+TF VYKKLTG++V FEFPE
Sbjct: 143 RIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 93.5 bits (222), Expect = 2e-18
Identities = 44/52 (84%), Positives = 49/52 (94%)
Frame = +2
Query: 410 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHKV 565
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EHKV
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 32.3 bits (70), Expect = 4.0
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -1
Query: 582 TDWKVSTLCSIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKTKS 448
T W ++ LCS++ W L CT + P L+ L T+S+ KS
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKS 307
>BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein.
Length = 648
Score = 32.3 bits (70), Expect = 4.0
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 86 KQAVLRRIPSSXSISQALVELETNSDLKAQLRELYITKAKEI-ELHNKKSIIIYVPMPKL 262
K+A+ + + + L E+E + K Q +++ + KE+ E+HNK+ + M
Sbjct: 569 KRALEAKELARQHLRDQLDEVEKETRSKLQEIDIFNNQLKELREIHNKQQLQKQKSMEAE 628
Query: 263 KAFQKIQIRLVRELEKK 313
+ QK Q R + ELEKK
Sbjct: 629 RLKQKEQERKIIELEKK 645
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 31.5 bits (68), Expect = 6.9
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 128 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 295
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 296 RELEKKFSGK 325
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.5 bits (68), Expect = 6.9
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 128 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 295
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 296 RELEKKFSGK 325
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.5 bits (68), Expect = 6.9
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 128 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 295
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 296 RELEKKFSGK 325
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 31.5 bits (68), Expect = 6.9
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 128 SQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYV----PMPKLKAFQKIQIRLV 295
+ +LVEL + D A L+ L + NKK +YV P ++ FQK++++
Sbjct: 97 NNSLVELG-DLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKER 155
Query: 296 RELEKKFSGK 325
+E EK F GK
Sbjct: 156 QEAEKMFKGK 165
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.1 bits (67), Expect = 9.2
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 164 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 343
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 344 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 463
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.1 bits (67), Expect = 9.2
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 164 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 343
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 344 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 463
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.1 bits (67), Expect = 9.2
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 164 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 343
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 344 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 463
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.1 bits (67), Expect = 9.2
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 164 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 343
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 344 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 463
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3174
Score = 31.1 bits (67), Expect = 9.2
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 164 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 343
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 344 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 463
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting 13
homolog A (S. cerevisiae) protein.
Length = 3095
Score = 31.1 bits (67), Expect = 9.2
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 164 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 343
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 344 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 463
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 31.1 bits (67), Expect = 9.2
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 164 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 343
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 344 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 463
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 31.1 bits (67), Expect = 9.2
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 164 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 343
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 344 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 463
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 31.1 bits (67), Expect = 9.2
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 164 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 343
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 344 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 463
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 31.1 bits (67), Expect = 9.2
Identities = 24/100 (24%), Positives = 46/100 (46%)
Frame = +2
Query: 164 LKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 343
L + + + +EL +K + + V MPK K + K+ + +R +KK G +
Sbjct: 733 LSVSTQHILVPMHFNLEL-SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI-- 789
Query: 344 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLVFP 463
+ +PKP T V+ K + +T TS+ + + + P
Sbjct: 790 --ESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIP 827
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,793,353
Number of Sequences: 237096
Number of extensions: 2585521
Number of successful extensions: 5401
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5346
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18660671970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -