Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_J06
         (1392 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000F205BB Cluster: PREDICTED: similar to formin 2; ...    37   1.1  
UniRef50_A4S292 Cluster: Predicted protein; n=1; Ostreococcus lu...    37   1.1  

>UniRef50_UPI0000F205BB Cluster: PREDICTED: similar to formin 2; n=2;
            Danio rerio|Rep: PREDICTED: similar to formin 2 - Danio
            rerio
          Length = 1465

 Score = 37.1 bits (82), Expect = 1.1
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
 Frame = +2

Query: 887  PXPXRAXXPPPVXPGL-----XPPXGXGPXXPPXPXXXGXVXPXL 1006
            P P  A  PPP  PG+      PP G GP  PP P   G   P +
Sbjct: 968  PLPGMAPPPPPPFPGMTPPPPPPPPGCGPPPPPLPPGIGPPPPFM 1012


>UniRef50_A4S292 Cluster: Predicted protein; n=1; Ostreococcus
           lucimarinus CCE9901|Rep: Predicted protein -
           Ostreococcus lucimarinus CCE9901
          Length = 547

 Score = 37.1 bits (82), Expect = 1.1
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = +2

Query: 887 PXPXRAXXPPPVXPGLXPPXGXGPXXPPXP 976
           P P  +  PPPV PG+ PP    P  PP P
Sbjct: 383 PPPGASRAPPPVPPGVPPPATRAPPLPPTP 412


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,073,855
Number of Sequences: 1657284
Number of extensions: 5980547
Number of successful extensions: 25719
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23306
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 145777233240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)