Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_J04
         (1269 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ...    32   0.99 
Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical pr...    31   1.7  
Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical pr...    30   3.0  
U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical pr...    30   3.0  
U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    29   5.3  
AL034392-4|CAA22307.2|  203|Caenorhabditis elegans Hypothetical ...    29   5.3  
Z81593-11|CAI94505.2|  360|Caenorhabditis elegans Hypothetical p...    29   7.0  
Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical pr...    29   9.3  
Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical pr...    29   9.3  
Z84574-1|CAE54890.1|  577|Caenorhabditis elegans Hypothetical pr...    29   9.3  
AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical ...    29   9.3  
AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical ...    29   9.3  

>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
           protein Y32B12B.4 protein.
          Length = 1528

 Score = 31.9 bits (69), Expect = 0.99
 Identities = 18/81 (22%), Positives = 38/81 (46%), Gaps = 5/81 (6%)
 Frame = +1

Query: 544 GIGKPQPDNRELI---QGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEENDALLK- 711
           G     P++ E +   +  A+E+C  ++N+FY        +   H + F+C   +  +K 
Sbjct: 582 GTADDVPESHEALAQQKTAANEYCFTVINDFYQSHKTAQRILYDHTRCFLCATKNCSVKI 641

Query: 712 -YVRYTNPNLRV*LSMTSLYT 771
            ++ Y    + + LS++S  T
Sbjct: 642 VFIEYEKYIIAIGLSLSSAAT 662


>Z81542-1|CAB04414.1|  379|Caenorhabditis elegans Hypothetical
           protein F49A5.2 protein.
          Length = 379

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 289 ASNYCRQRCMDLVSLEPSDENEWVKARIVQDKXKYI 396
           A  +C+ +C +LVS+  ++EN +V++ I  D   YI
Sbjct: 267 AQTFCKTKCANLVSINSANENRYVQS-IYNDTNGYI 301


>Z81506-1|CAB04128.1|  555|Caenorhabditis elegans Hypothetical
           protein F16H6.1 protein.
          Length = 555

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 289 ASNYCRQRCMDLVSLEPSDENEWVKARIVQDKXKYI 396
           A + C+Q C +LVS+   +EN +V++    +   YI
Sbjct: 189 AQSACQQECGNLVSIHSDEENNFVQSLFTTNSPTYI 224


>U64836-4|AAG24059.1|  417|Caenorhabditis elegans Hypothetical
           protein F10G2.3 protein.
          Length = 417

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +1

Query: 271 EAAWLSASNYCRQRCMDLVSLEPSDENEWV 360
           EA+++ A N C Q C DL ++  ++EN ++
Sbjct: 175 EASFVVAQNTCEQFCGDLATIHTANENRYI 204


>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = +1

Query: 550 GKPQPDNRELIQGGASEHCVAILNNFYNDGVHWHDVACHHRKPFVCEE 693
           GK QPDN+E      +E+CV +     +    W D  C   +PFVC++
Sbjct: 269 GKKQPDNQE-----HNENCVEV-----DHSGQWTDKLCIITRPFVCKK 306


>AL034392-4|CAA22307.2|  203|Caenorhabditis elegans Hypothetical
           protein Y40B1A.4 protein.
          Length = 203

 Score = 29.5 bits (63), Expect = 5.3
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +3

Query: 243 VAGPSAPRRRSSLVERKQLLP 305
           VAGPSAP R+ + ++ +Q++P
Sbjct: 36  VAGPSAPARKPNQIQHRQMIP 56


>Z81593-11|CAI94505.2|  360|Caenorhabditis elegans Hypothetical
           protein T20B3.16 protein.
          Length = 360

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +1

Query: 289 ASNYCRQRCMDLVSLEPSDENEWVKARIVQDKXKYIWTSGRLCD 420
           A  +C+ +C ++VS+  ++EN +V++ I   K  YI     + D
Sbjct: 258 AQKFCKTKCANVVSINSANENRYVQS-IYYIKDGYITLGAAVLD 300


>Z84574-8|CAE54891.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 502 PTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGV 642
           P  +R+Q +   G   G P P N     G AS+     LN+FY DG+
Sbjct: 51  PIQHREQANAEFGQKEGSPDPKNMVAATGNASK---PSLNSFYADGL 94


>Z84574-7|CAB06544.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 502 PTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGV 642
           P  +R+Q +   G   G P P N     G AS+     LN+FY DG+
Sbjct: 51  PIQHREQANAEFGQKEGSPDPKNMVAATGNASK---PSLNSFYADGL 94


>Z84574-1|CAE54890.1|  577|Caenorhabditis elegans Hypothetical
           protein F33E2.2c protein.
          Length = 577

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 502 PTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGV 642
           P  +R+Q +   G   G P P N     G AS+     LN+FY DG+
Sbjct: 51  PIQHREQANAEFGQKEGSPDPKNMVAATGNASK---PSLNSFYADGL 94


>AL022593-4|CAE54889.1|  921|Caenorhabditis elegans Hypothetical
           protein F33E2.2b protein.
          Length = 921

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 502 PTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGV 642
           P  +R+Q +   G   G P P N     G AS+     LN+FY DG+
Sbjct: 51  PIQHREQANAEFGQKEGSPDPKNMVAATGNASK---PSLNSFYADGL 94


>AL022593-3|CAA18635.3|  928|Caenorhabditis elegans Hypothetical
           protein F33E2.2a protein.
          Length = 928

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +1

Query: 502 PTTNRQQNDWSEGGGIGKPQPDNRELIQGGASEHCVAILNNFYNDGV 642
           P  +R+Q +   G   G P P N     G AS+     LN+FY DG+
Sbjct: 51  PIQHREQANAEFGQKEGSPDPKNMVAATGNASK---PSLNSFYADGL 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,951,921
Number of Sequences: 27780
Number of extensions: 462175
Number of successful extensions: 1153
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1151
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3537281262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)