Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_J02
         (1244 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   157   6e-40
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    26   2.6  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   4.6  
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   6.1  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  157 bits (381), Expect = 6e-40
 Identities = 77/120 (64%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
 Frame = +2

Query: 503 ETKKP-VTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESFETANLR 679
           +T KP   Y+PP PT DE+ IF S ISSGINFDKF+ I V+VSGENPP  +ESFE + LR
Sbjct: 123 KTDKPRELYIPPLPTEDESLIFGSGISSGINFDKFEEIQVRVSGENPPDHVESFERSGLR 182

Query: 680 KYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQDPKD 859
           + V+ NV K+ Y KPTPIQ+ AIPII++GRDLM CAQTGSGKTAAF++P+I+ LL D +D
Sbjct: 183 EEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHHLL-DKED 241



 Score = 50.4 bits (115), Expect = 1e-07
 Identities = 22/36 (61%), Positives = 29/36 (80%)
 Frame = +1

Query: 898  IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAV 1005
            I +PTREL +QI +E RKF++G+ LKV  +YGGTAV
Sbjct: 254  IVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAV 289


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -3

Query: 681 FLRFA-VSKLSIGLGGFSPLTFTAIWSNLSKLIPELIVLLK 562
           FLR   ++  SI LGGF  +  T   S L+ ++  L+VLL+
Sbjct: 317 FLRATEMNPSSINLGGFFDVNRTLFKSLLATMVTYLVVLLQ 357


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 59  YCLAPSRCRSPV 94
           YC++ SRCRSPV
Sbjct: 816 YCVSFSRCRSPV 827


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 6.1
 Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = +2

Query: 56  HYCLAP-SRCRSPVKIKNP-IVMDXXWXXSCEAVVVPPPPLQNHDSVXEGHSL 208
           H+ L P   C+ P   K   + ++       E+ V+PP  +  H     GHSL
Sbjct: 114 HHELKPIETCQYPFSAKQKEVCINPYHYKRVESPVLPPVLVPRHSEFAPGHSL 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 843,669
Number of Sequences: 2352
Number of extensions: 15307
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 142243956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)