Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP23_F_J02
(1244 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 125 6e-29
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 120 2e-27
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 120 2e-27
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 119 5e-27
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 100 2e-21
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 100 2e-21
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 100 2e-21
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 100 2e-21
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 100 2e-21
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 100 2e-21
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 91 1e-18
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 91 1e-18
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 82 9e-16
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 79 6e-15
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 78 1e-14
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 76 6e-14
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 66 6e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 64 3e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 64 3e-10
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 63 5e-10
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 61 1e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 60 2e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 60 2e-09
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 60 4e-09
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 59 7e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 58 1e-08
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 58 1e-08
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 57 3e-08
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 56 5e-08
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 55 9e-08
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 55 9e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 55 1e-07
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 53 4e-07
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 52 8e-07
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 52 1e-06
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 49 8e-06
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 49 8e-06
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 46 6e-05
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 46 6e-05
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 46 6e-05
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 41 0.002
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 38 0.020
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 37 0.026
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 36 0.045
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 30 3.9
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 30 3.9
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 30 3.9
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 29 6.8
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 29 6.8
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 125 bits (302), Expect = 6e-29
Identities = 55/105 (52%), Positives = 78/105 (74%)
Frame = +2
Query: 551 ETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESFETANLRKYVLDNVLKAGYRKPTP 730
E E+FS +S GINFDK++ I V+ +G++ P+PI F +L +++ +N+ AGY +PTP
Sbjct: 133 EQELFSGQLS-GINFDKYEEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTP 191
Query: 731 IQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQDPKDLI 865
+QK +IP + GRDLM CAQTGSGKTAAFLVP++N +LQD D +
Sbjct: 192 VQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGPDAV 236
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGG 996
+ SPTREL+LQIFNE RKF+Y + + A YGG
Sbjct: 255 VLSPTRELSLQIFNESRKFAYRTPITSALLYGG 287
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 120 bits (290), Expect = 2e-27
Identities = 59/133 (44%), Positives = 86/133 (64%)
Frame = +2
Query: 467 NDYEDNEIGENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPR 646
N++ D+ G N + + E+ +F T SGINFDK+++I V+VSG++ P
Sbjct: 78 NNFADSGNGFNNNGAESNQWGGAPAEYSESNLFHRT-DSGINFDKYENIPVEVSGDSVPA 136
Query: 647 PIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVP 826
IE F A V++NV ++GY KPTP+QK++IP +++ RDLM CAQTGSGKTAAFL+P
Sbjct: 137 AIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLP 196
Query: 827 IINMLLQDPKDLI 865
II +L D++
Sbjct: 197 IIQHILAGGPDMV 209
Score = 41.1 bits (92), Expect = 0.002
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGG 996
+ SPTREL +QI E KFSY S ++ A YGG
Sbjct: 227 VLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 259
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 120 bits (290), Expect = 2e-27
Identities = 59/133 (44%), Positives = 86/133 (64%)
Frame = +2
Query: 467 NDYEDNEIGENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPR 646
N++ D+ G N + + E+ +F T SGINFDK+++I V+VSG++ P
Sbjct: 59 NNFADSGNGFNNNGAESNQWGGAPAEYSESNLFHRT-DSGINFDKYENIPVEVSGDSVPA 117
Query: 647 PIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVP 826
IE F A V++NV ++GY KPTP+QK++IP +++ RDLM CAQTGSGKTAAFL+P
Sbjct: 118 AIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLP 177
Query: 827 IINMLLQDPKDLI 865
II +L D++
Sbjct: 178 IIQHILAGGPDMV 190
Score = 41.1 bits (92), Expect = 0.002
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGG 996
+ SPTREL +QI E KFSY S ++ A YGG
Sbjct: 208 VLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 240
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 119 bits (286), Expect = 5e-27
Identities = 55/105 (52%), Positives = 77/105 (73%)
Frame = +2
Query: 551 ETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESFETANLRKYVLDNVLKAGYRKPTP 730
E+ +F T SGINFDK+++I V+VSG++ P IE F A V++NV ++GY KPTP
Sbjct: 90 ESNLFHRT-DSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTP 148
Query: 731 IQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQDPKDLI 865
+QK++IP +++ RDLM CAQTGSGKTAAFL+PII +L D++
Sbjct: 149 VQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMV 193
Score = 41.1 bits (92), Expect = 0.002
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGG 996
+ SPTREL +QI E KFSY S ++ A YGG
Sbjct: 211 VLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 243
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 100 bits (239), Expect = 2e-21
Identities = 59/139 (42%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Frame = +2
Query: 491 GENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPP---RPIESF 661
G GE K TYVP E N E IS G+ F+KF VK++ +P ++F
Sbjct: 286 GVEGEGPK-ATYVPVED-NMEDVFNMQKISEGLMFNKFFDAEVKLTSSEKTVGIKPCKTF 343
Query: 662 ETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINML 841
ANL + + NV AGY K TPIQ+ A+P++ G D+M CAQTGSGKTAAFL+PI+ L
Sbjct: 344 AEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRL 403
Query: 842 LQDPKDLISXNGCAXPQVI 898
+ D + G P+ I
Sbjct: 404 IDDNNLNTAGEGGCYPRCI 422
Score = 44.4 bits (100), Expect = 2e-04
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAV 1005
I +PTREL QI+NE RKF+Y + +++ YGG AV
Sbjct: 423 ILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 100 bits (239), Expect = 2e-21
Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 6/148 (4%)
Frame = +2
Query: 491 GENGETKKPVTYVPPEPTNDETEIFS-STISSGINFDKFDHIAVKVSGENPP---RPIES 658
G GE K TYVP E +E +F+ IS G+ F+KF VK++ + P + ++
Sbjct: 497 GAEGEGPK-ATYVPVEDNMEE--VFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKT 553
Query: 659 FETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINM 838
F ANL + + NV AGY K TPIQ+ +P+I G D+M CAQTGSGKTAAFL+PI+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 839 LLQDPKDL--ISXNGCAXPQVIXYLQRE 916
L+ D DL GC +I RE
Sbjct: 614 LI-DENDLNTAGEGGCYPRCIILTPTRE 640
Score = 46.4 bits (105), Expect = 4e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAV 1005
I +PTRELT QI+NE RKF+Y + +++ YGG AV
Sbjct: 634 ILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 100 bits (239), Expect = 2e-21
Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 6/148 (4%)
Frame = +2
Query: 491 GENGETKKPVTYVPPEPTNDETEIFS-STISSGINFDKFDHIAVKVSGENPP---RPIES 658
G GE K TYVP E +E +F+ IS G+ F+KF VK++ + P + ++
Sbjct: 497 GAEGEGPK-ATYVPVEDNMEE--VFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKT 553
Query: 659 FETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINM 838
F ANL + + NV AGY K TPIQ+ +P+I G D+M CAQTGSGKTAAFL+PI+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 839 LLQDPKDL--ISXNGCAXPQVIXYLQRE 916
L+ D DL GC +I RE
Sbjct: 614 LI-DENDLNTAGEGGCYPRCIILTPTRE 640
Score = 46.4 bits (105), Expect = 4e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAV 1005
I +PTRELT QI+NE RKF+Y + +++ YGG AV
Sbjct: 634 ILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 100 bits (239), Expect = 2e-21
Identities = 59/139 (42%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Frame = +2
Query: 491 GENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPP---RPIESF 661
G GE K TYVP E N E IS G+ F+KF VK++ +P ++F
Sbjct: 286 GVEGEGPK-ATYVPVED-NMEDVFNMQKISEGLMFNKFFDAEVKLTSSEKTVGIKPCKTF 343
Query: 662 ETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINML 841
ANL + + NV AGY K TPIQ+ A+P++ G D+M CAQTGSGKTAAFL+PI+ L
Sbjct: 344 AEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRL 403
Query: 842 LQDPKDLISXNGCAXPQVI 898
+ D + G P+ I
Sbjct: 404 IDDNNLNTAGEGGCYPRCI 422
Score = 44.4 bits (100), Expect = 2e-04
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAV 1005
I +PTREL QI+NE RKF+Y + +++ YGG AV
Sbjct: 423 ILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 100 bits (239), Expect = 2e-21
Identities = 59/139 (42%), Positives = 78/139 (56%), Gaps = 3/139 (2%)
Frame = +2
Query: 491 GENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPP---RPIESF 661
G GE K TYVP E N E IS G+ F+KF VK++ +P ++F
Sbjct: 286 GVEGEGPK-ATYVPVED-NMEDVFNMQKISEGLMFNKFFDAEVKLTSSEKTVGIKPCKTF 343
Query: 662 ETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINML 841
ANL + + NV AGY K TPIQ+ A+P++ G D+M CAQTGSGKTAAFL+PI+ L
Sbjct: 344 AEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRL 403
Query: 842 LQDPKDLISXNGCAXPQVI 898
+ D + G P+ I
Sbjct: 404 IDDNNLNTAGEGGCYPRCI 422
Score = 44.4 bits (100), Expect = 2e-04
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAV 1005
I +PTREL QI+NE RKF+Y + +++ YGG AV
Sbjct: 423 ILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAV 458
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 100 bits (239), Expect = 2e-21
Identities = 63/148 (42%), Positives = 84/148 (56%), Gaps = 6/148 (4%)
Frame = +2
Query: 491 GENGETKKPVTYVPPEPTNDETEIFS-STISSGINFDKFDHIAVKVSGENPP---RPIES 658
G GE K TYVP E +E +F+ IS G+ F+KF VK++ + P + ++
Sbjct: 497 GAEGEGPK-ATYVPVEDNMEE--VFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKT 553
Query: 659 FETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINM 838
F ANL + + NV AGY K TPIQ+ +P+I G D+M CAQTGSGKTAAFL+PI+
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 839 LLQDPKDL--ISXNGCAXPQVIXYLQRE 916
L+ D DL GC +I RE
Sbjct: 614 LI-DENDLNTAGEGGCYPRCIILTPTRE 640
Score = 46.4 bits (105), Expect = 4e-05
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAV 1005
I +PTRELT QI+NE RKF+Y + +++ YGG AV
Sbjct: 634 ILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAV 669
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 91.5 bits (217), Expect = 1e-18
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 6/139 (4%)
Frame = +2
Query: 518 VTYVPPEPTNDETEIFSST-ISSGINFDKFDHIAVKVSGENPP---RPIESFETANLRKY 685
VTYVP + E+FS I++G FDKF +V++ P +P +SF +++ +
Sbjct: 251 VTYVPV--VDKMEEVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQS 308
Query: 686 VLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQDPKDLI 865
+ NV +AGY + TPIQ+ +P++ G+D++ CAQTGSGKTAAFL+PI++ L+ + KDL
Sbjct: 309 MRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILE-KDLN 367
Query: 866 --SXNGCAXPQVIXYLQRE 916
+ GC +I RE
Sbjct: 368 YGAEGGCYPRCIILTPTRE 386
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAV 1005
I +PTREL QI+NE RKFSY S +++ YGG V
Sbjct: 380 ILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 91.5 bits (217), Expect = 1e-18
Identities = 55/139 (39%), Positives = 85/139 (61%), Gaps = 6/139 (4%)
Frame = +2
Query: 518 VTYVPPEPTNDETEIFSST-ISSGINFDKFDHIAVKVSGENPP---RPIESFETANLRKY 685
VTYVP + E+FS I++G FDKF +V++ P +P +SF +++ +
Sbjct: 251 VTYVPV--VDKMEEVFSMLKINAGDFFDKFFDASVQLVSRGQPVTIQPCKSFSDSDIPQS 308
Query: 686 VLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQDPKDLI 865
+ NV +AGY + TPIQ+ +P++ G+D++ CAQTGSGKTAAFL+PI++ L+ + KDL
Sbjct: 309 MRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSRLILE-KDLN 367
Query: 866 --SXNGCAXPQVIXYLQRE 916
+ GC +I RE
Sbjct: 368 YGAEGGCYPRCIILTPTRE 386
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAV 1005
I +PTREL QI+NE RKFSY S +++ YGG V
Sbjct: 380 ILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINV 415
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 81.8 bits (193), Expect = 9e-16
Identities = 40/87 (45%), Positives = 58/87 (66%)
Frame = +2
Query: 617 VKVSGENPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTG 796
++V G PPRP+ SF + K +++ + K+ Y +PTPIQ AIP +SGRD++G A+TG
Sbjct: 253 LRVGGLKPPRPVCSFAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTG 312
Query: 797 SGKTAAFLVPIINMLLQDPKDLISXNG 877
SGKTAA+L P I ++ P DL + G
Sbjct: 313 SGKTAAYLWPAIVHIMDQP-DLKAGEG 338
Score = 33.1 bits (72), Expect = 0.42
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGG 996
I PTREL +Q+F E +KF + AYGG
Sbjct: 343 IVVPTRELAIQVFQEAKKFCKVYNINPICAYGG 375
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 79.0 bits (186), Expect = 6e-15
Identities = 36/80 (45%), Positives = 52/80 (65%)
Frame = +2
Query: 617 VKVSGENPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTG 796
+ + G PRP+ ++E A V V + GY +PTPIQ+ AIPI + RD++G A+TG
Sbjct: 289 ISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETG 348
Query: 797 SGKTAAFLVPIINMLLQDPK 856
SGKTAAFL+P++ + PK
Sbjct: 349 SGKTAAFLLPLLVWITSLPK 368
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 77.8 bits (183), Expect = 1e-14
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Frame = +2
Query: 467 NDYEDNEIGENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPR 646
++ E E E E + V + + T D + S + + D + + G++
Sbjct: 85 DEAEAAEAEEKDEEEDDVQQLGGKETRDTVREKRKSGKSKKSQENEDFFSALIDGKSLDT 144
Query: 647 PIE-SFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLV 823
+ SFE NL + +L AGY PTPIQ+ IP+ ++G+D+ CA TG+GKTAAF++
Sbjct: 145 SVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVL 204
Query: 824 PIINMLLQDPK 856
PI+ ++ PK
Sbjct: 205 PILERMIYRPK 215
Score = 29.5 bits (63), Expect = 5.2
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +1
Query: 907 PTRELTLQIFNEXRKFSYGSXLKVAXAYGG 996
PTREL +Q+F RK S L+V GG
Sbjct: 227 PTRELAIQVFQVFRKLSTFIQLEVCLCAGG 256
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 75.8 bits (178), Expect = 6e-14
Identities = 38/87 (43%), Positives = 57/87 (65%)
Frame = +2
Query: 596 DKFDHIAVKVSGENPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDL 775
++ D I VK G + P+PI+++ + +++ + K Y KPT IQ AIP IMSGRD+
Sbjct: 287 EELDSITVK--GIDCPKPIKTWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDV 344
Query: 776 MGCAQTGSGKTAAFLVPIINMLLQDPK 856
+G A+TGSGKT AFL+P+ +L P+
Sbjct: 345 IGIAKTGSGKTLAFLLPMFRHILDQPE 371
Score = 39.5 bits (88), Expect = 0.005
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAVPIKVITL 1026
I +PTREL +Q + E KF+ LKVA YGG + ++ L
Sbjct: 382 ILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADL 424
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 65.7 bits (153), Expect = 6e-11
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Frame = +2
Query: 641 PRPIESFETA-NLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAF 817
P P+ SFE A ++ + K G+ KP+PIQ P+++SG+D +G +QTGSGKT AF
Sbjct: 79 PPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAF 138
Query: 818 LVPII 832
L+P +
Sbjct: 139 LLPAL 143
Score = 33.9 bits (74), Expect = 0.24
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAVPIKV 1017
+ SPTREL QI E +K+SY + K YGG + P +V
Sbjct: 168 VLSPTRELAQQIEGEVKKYSY-NGYKSVCLYGGGSRPEQV 206
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 63.7 bits (148), Expect = 3e-10
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +2
Query: 596 DKFDHIAVKVSGENPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDL 775
D+ D ++++ + ++ L V + K G+ +PTPIQ+ IP IM G+D+
Sbjct: 5 DEEDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDV 64
Query: 776 MGCAQTGSGKTAAFLVPIINML 841
+ ++TGSGKTAAF++P++ L
Sbjct: 65 VAMSRTGSGKTAAFVIPMLQKL 86
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 63.7 bits (148), Expect = 3e-10
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +2
Query: 596 DKFDHIAVKVSGENPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDL 775
D+ D ++++ + ++ L V + K G+ +PTPIQ+ IP IM G+D+
Sbjct: 5 DEEDFTQLQINQNRKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDV 64
Query: 776 MGCAQTGSGKTAAFLVPIINML 841
+ ++TGSGKTAAF++P++ L
Sbjct: 65 VAMSRTGSGKTAAFVIPMLQKL 86
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 62.9 bits (146), Expect = 5e-10
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 611 IAVKVSGENPPRPIESFETANLRKYVLDNVLKA-GYRKPTPIQKNAIPIIMSGRDLMGCA 787
+ + G++ P PI SF K +L+ + K G PT IQ IP+ +SGRD++G A
Sbjct: 175 LGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIA 234
Query: 788 QTGSGKTAAFLVPIINMLLQDPKDL 862
TGSGKT F++P++ L+ L
Sbjct: 235 STGSGKTMTFVLPLVMFCLEQEMKL 259
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 61.3 bits (142), Expect = 1e-09
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +2
Query: 617 VKVSGENPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTG 796
V + G PRP+ F A L + + +L ++KPT IQ + PI MSGRD++ A+TG
Sbjct: 118 VTLEGRGVPRPVFEFNEAPLPGQIHE-LLYGKFQKPTVIQSISWPIAMSGRDIISIAKTG 176
Query: 797 SGKTAAFLVPII 832
SGKT AF++P +
Sbjct: 177 SGKTLAFMLPAL 188
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 61.3 bits (142), Expect = 1e-09
Identities = 26/68 (38%), Positives = 44/68 (64%)
Frame = +2
Query: 653 ESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPII 832
+SF + + + D + G+ KP+ IQ+ A+P + G+D++G A+TGSGKT AF +P++
Sbjct: 44 KSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
Query: 833 NMLLQDPK 856
LL P+
Sbjct: 104 QSLLDHPQ 111
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 60.5 bits (140), Expect = 2e-09
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +2
Query: 551 ETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESFETANLRKYVL-DNVLKAGYRKPT 727
+ ++F +++ D FD V +G+ + SF+ + L DN+ + +PT
Sbjct: 702 DDKMFEDAVNNDDKID-FDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPT 760
Query: 728 PIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQD 850
PIQ+ + IM G D++ CA TGSGKT AFL+P + L+++
Sbjct: 761 PIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEE 801
Score = 33.5 bits (73), Expect = 0.32
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGG 996
I +PTREL Q F R+ +Y + LK A+GG
Sbjct: 819 IVAPTRELVNQTFTTARQLTYETGLKCGLAFGG 851
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 60.5 bits (140), Expect = 2e-09
Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Frame = +2
Query: 551 ETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESFETANLRKYVL-DNVLKAGYRKPT 727
+ ++F +++ D FD V +G+ + SF+ + L DN+ + +PT
Sbjct: 702 DDKMFEDAVNNDDKID-FDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPT 760
Query: 728 PIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQD 850
PIQ+ + IM G D++ CA TGSGKT AFL+P + L+++
Sbjct: 761 PIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEE 801
Score = 33.5 bits (73), Expect = 0.32
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 898 IXSPTRELTLQIFNEXRKFSYGSXLKVAXAYGG 996
I +PTREL Q F R+ +Y + LK A+GG
Sbjct: 819 IVAPTRELVNQTFTTARQLTYETGLKCGLAFGG 851
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 59.7 bits (138), Expect = 4e-09
Identities = 28/87 (32%), Positives = 48/87 (55%)
Frame = +2
Query: 581 SGINFDKFDHIAVKVSGENPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIM 760
+G +K D V+ I +F+ LR+ +L + G+ KP+ IQ+ A+P I+
Sbjct: 2 AGKKAEKDDMATVEFESSEEVNVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAIL 61
Query: 761 SGRDLMGCAQTGSGKTAAFLVPIINML 841
RD++ AQ+G+GKTA F + ++ L
Sbjct: 62 KARDVIAQAQSGTGKTATFSISVLQSL 88
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 58.8 bits (136), Expect = 7e-09
Identities = 36/122 (29%), Positives = 59/122 (48%)
Frame = +2
Query: 482 NEIGENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESF 661
N G N + P +VP T D E+ T + D AV++ + S+
Sbjct: 326 NSEGVNAPVRAPRDWVPV--TRDIDELVRETADRLADCDVGQDRAVEIRNAEKDVRLTSW 383
Query: 662 ETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINML 841
+ L +L+ + + Y IQ IP ++ G D++G A+T +GKTAAF +PII+ +
Sbjct: 384 TNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKI 443
Query: 842 LQ 847
L+
Sbjct: 444 LR 445
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 58.4 bits (135), Expect = 1e-08
Identities = 35/124 (28%), Positives = 55/124 (44%)
Frame = +2
Query: 482 NEIGENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESF 661
NE E E + V E ++++ E S G F D + + F
Sbjct: 34 NEEFEEFEDGEDVEDEEDEASDEDEE--ESEGEEGDEFKSSDDTPKPIQISEDNMTTKKF 91
Query: 662 ETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINML 841
+ ++ + + TP+Q IP I+ G D++GCA+TG+GKT AF +PI+ L
Sbjct: 92 SQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKL 151
Query: 842 LQDP 853
DP
Sbjct: 152 SVDP 155
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 58.4 bits (135), Expect = 1e-08
Identities = 35/124 (28%), Positives = 55/124 (44%)
Frame = +2
Query: 482 NEIGENGETKKPVTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESF 661
NE E E + V E ++++ E S G F D + + F
Sbjct: 34 NEEFEEFEDGEDVEDEEDEASDEDEE--ESEGEEGDEFKSSDDTPKPIQISEDNMTTKKF 91
Query: 662 ETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINML 841
+ ++ + + TP+Q IP I+ G D++GCA+TG+GKT AF +PI+ L
Sbjct: 92 SQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKL 151
Query: 842 LQDP 853
DP
Sbjct: 152 SVDP 155
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 56.8 bits (131), Expect = 3e-08
Identities = 25/64 (39%), Positives = 41/64 (64%)
Frame = +2
Query: 650 IESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPI 829
I +F+ LR+ +L + G+ KP+ IQ+ AIP I+ RD++ AQ+G+GKTA F + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 830 INML 841
+ L
Sbjct: 85 LQSL 88
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 56.0 bits (129), Expect = 5e-08
Identities = 25/73 (34%), Positives = 46/73 (63%)
Frame = +2
Query: 629 GENPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKT 808
G++ P I F +++ +L+ + + R+P+PIQ +IP + R+++ A TGSGKT
Sbjct: 118 GDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKT 177
Query: 809 AAFLVPIINMLLQ 847
AF +P+I+ +L+
Sbjct: 178 LAFALPVIDEILE 190
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 55.2 bits (127), Expect = 9e-08
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 635 NPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAA 814
N + +ESF+ L++ +L + G+ KP+ IQK AI +G+D++ AQ+G+GKTA
Sbjct: 23 NYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTAT 82
Query: 815 FLVPIINML-LQDP 853
F V I+ + +DP
Sbjct: 83 FSVSILQRIDHEDP 96
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 55.2 bits (127), Expect = 9e-08
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +2
Query: 635 NPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAA 814
N + +ESF+ L++ +L + G+ KP+ IQK AI +G+D++ AQ+G+GKTA
Sbjct: 23 NYDQVVESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTAT 82
Query: 815 FLVPIINML-LQDP 853
F V I+ + +DP
Sbjct: 83 FSVSILQRIDHEDP 96
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 54.8 bits (126), Expect = 1e-07
Identities = 22/68 (32%), Positives = 44/68 (64%)
Frame = +2
Query: 653 ESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPII 832
++F L + +L ++ + G+ K +Q++ I + + +++MG A+TGSGKT AFL+P++
Sbjct: 89 KTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLV 148
Query: 833 NMLLQDPK 856
L+ + K
Sbjct: 149 QKLIAESK 156
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 53.2 bits (122), Expect = 4e-07
Identities = 26/87 (29%), Positives = 51/87 (58%)
Frame = +2
Query: 581 SGINFDKFDHIAVKVSGENPPRPIESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIM 760
+G+N D K + + +E FE L + +L + + G+ KP+PIQ+ +I + +
Sbjct: 21 AGLNLPAKDR-RFKTADVTDTKGVE-FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVAL 78
Query: 761 SGRDLMGCAQTGSGKTAAFLVPIINML 841
+G+D++ A+ G+GKT A+ +P+I +
Sbjct: 79 TGQDILARAKNGTGKTGAYCIPVIEKI 105
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 52.0 bits (119), Expect = 8e-07
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = +2
Query: 659 FETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINM 838
FE L L+ + Y KPT IQ++ I ++G D++G A+TGSGKT A ++P++
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 839 L 841
L
Sbjct: 138 L 138
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 51.6 bits (118), Expect = 1e-06
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +2
Query: 686 VLDNVLKAGYRKPTPIQKNAIPIIMSGR-DLMGCAQTGSGKTAAFLVPIINMLLQDPKD 859
VL+ + + G+ +PT IQ +P + R D++G A+TGSGKT AF +P++ LL+ D
Sbjct: 166 VLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDD 224
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 48.8 bits (111), Expect = 8e-06
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Frame = +2
Query: 668 ANLRKYVLDNVLKA----GYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIIN 835
A+L V N+LKA G+ T IQ +I ++ G+D++ A+TGSGKT AFL+P I
Sbjct: 69 ASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIE 128
Query: 836 ML 841
+L
Sbjct: 129 LL 130
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 48.8 bits (111), Expect = 8e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +2
Query: 656 SFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIIN 835
+FE + + D + + PT +Q AIP I+ G D + A+TGSGKT AF +PI
Sbjct: 3 AFEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
Query: 836 MLLQDPK 856
++ + K
Sbjct: 63 IVWERRK 69
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 46.0 bits (104), Expect = 6e-05
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Frame = +2
Query: 713 YRKPTPIQKNAIPIIMSGR-DLMGCAQTGSGKTAAFLVPIINMLLQDPKD 859
+ +PT IQ +P + R D++G A+TGSGKT AF +P++ LL+ D
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDD 57
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +2
Query: 656 SFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIIN 835
+FE+ + + L+ + + + +P+P+Q AIP+ + GRD++ A++G+GKT F V +
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 836 ML 841
L
Sbjct: 83 NL 84
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 46.0 bits (104), Expect = 6e-05
Identities = 20/62 (32%), Positives = 39/62 (62%)
Frame = +2
Query: 656 SFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIIN 835
+FE+ + + L+ + + + +P+P+Q AIP+ + GRD++ A++G+GKT F V +
Sbjct: 23 TFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVE 82
Query: 836 ML 841
L
Sbjct: 83 NL 84
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 44.4 bits (100), Expect = 2e-04
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +2
Query: 611 IAVKVSGENPPRP---IESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSG--RDL 775
+ V V ++P P I SF L+ VL + ++ PT IQ+ A+P+++ +L
Sbjct: 192 VVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNL 251
Query: 776 MGCAQTGSGKTAAFLVPII 832
+ AQ+G+GKTAAF++ ++
Sbjct: 252 IAQAQSGTGKTAAFVLTML 270
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 44.4 bits (100), Expect = 2e-04
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +2
Query: 611 IAVKVSGENPPRP---IESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSG--RDL 775
+ V V ++P P I SF L+ VL + ++ PT IQ+ A+P+++ +L
Sbjct: 217 VVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNL 276
Query: 776 MGCAQTGSGKTAAFLVPII 832
+ AQ+G+GKTAAF++ ++
Sbjct: 277 IAQAQSGTGKTAAFVLTML 295
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 44.4 bits (100), Expect = 2e-04
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +2
Query: 611 IAVKVSGENPPRP---IESFETANLRKYVLDNVLKAGYRKPTPIQKNAIPIIMSG--RDL 775
+ V V ++P P I SF L+ VL + ++ PT IQ+ A+P+++ +L
Sbjct: 601 VVVDVQRQDPKSPLYSISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNL 660
Query: 776 MGCAQTGSGKTAAFLVPII 832
+ AQ+G+GKTAAF++ ++
Sbjct: 661 IAQAQSGTGKTAAFVLTML 679
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 41.1 bits (92), Expect = 0.002
Identities = 19/53 (35%), Positives = 33/53 (62%)
Frame = +2
Query: 674 LRKYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPII 832
L++ +L + G+ KP+ IQK+A+ +G+D+ +Q GSGKT L+ I+
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDIL 55
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 37.5 bits (83), Expect = 0.020
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 731 IQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQD 850
+Q+ +I +I GR L+ A TG GKT AFL+P I L++
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALEN 58
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 37.1 bits (82), Expect = 0.026
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2
Query: 731 IQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQD 850
+Q+ +I +I GR L+ A TG GKT AFL+P I L++
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALKN 158
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 36.3 bits (80), Expect = 0.045
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 731 IQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQDPKDLISXNGCAXPQVI 898
+Q+ +I I R L+ A TG GKT AFL+P I + L++ L + + P ++
Sbjct: 118 VQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTIL 173
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +2
Query: 698 VLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINML 841
V Y+ T +Q + +++ D++ + TGSGKT AF++P++ M+
Sbjct: 24 VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMI 71
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical protein
C26D10.2b protein.
Length = 268
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 910 TRELTLQIFNEXRKFS-YGSXLKVAXAYGGTAV 1005
TREL QI E +FS Y +KVA +GG A+
Sbjct: 118 TRELAFQISKEYERFSKYLPGVKVAVFFGGMAI 150
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical protein
C26D10.2a protein.
Length = 425
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 910 TRELTLQIFNEXRKFS-YGSXLKVAXAYGGTAV 1005
TREL QI E +FS Y +KVA +GG A+
Sbjct: 118 TRELAFQISKEYERFSKYLPGVKVAVFFGGMAI 150
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 29.9 bits (64), Expect = 3.9
Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +1
Query: 910 TRELTLQIFNEXRKFS-YGSXLKVAXAYGGTAV 1005
TREL QI E +FS Y +KVA +GG A+
Sbjct: 117 TRELAFQISKEYERFSKYLPGVKVAVFFGGMAI 149
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 728 PIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPII 832
P+Q+ AI +MS D + TG GK+ + +P +
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 123
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 29.1 bits (62), Expect = 6.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 728 PIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPII 832
P+Q+ AI +MS D + TG GK+ + +P +
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,453,936
Number of Sequences: 27780
Number of extensions: 338376
Number of successful extensions: 925
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 925
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3453805598
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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