Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_I24
         (1220 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    24   2.7  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   4.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   8.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   8.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   8.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   8.1  

>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 23.8 bits (49), Expect = 2.7
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +2

Query: 248 LYCQLHSMEPPQTPKFTNEAYPLFVTWKIGKEHRLR 355
           L C+ H      T      A  L ++ ++GK+HR++
Sbjct: 83  LSCRFHQGASYNTLNTCRSALALLLSPEVGKDHRIK 118


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -1

Query: 242 QNKNNTYRVSLQNRGNH 192
           QN++ TY++++ N GN+
Sbjct: 478 QNQDFTYKITVNNSGNN 494


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 81   VYLANYPSIYLRCRLYAV 134
            +YL + PS+YL   LY++
Sbjct: 1034 IYLLSIPSMYLLLILYSI 1051


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 81   VYLANYPSIYLRCRLYAV 134
            +YL + PS+YL   LY++
Sbjct: 1034 IYLLSIPSMYLLLILYSI 1051


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 81   VYLANYPSIYLRCRLYAV 134
            +YL + PS+YL   LY++
Sbjct: 1034 IYLLSIPSMYLLLILYSI 1051


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 8.1
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 81   VYLANYPSIYLRCRLYAV 134
            +YL + PS+YL   LY++
Sbjct: 1034 IYLLSIPSMYLLLILYSI 1051


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,818
Number of Sequences: 336
Number of extensions: 3730
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35658067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)