Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP23_F_I24
         (1220 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1011 + 22234306-22234388,22235107-22235226,22235401-222355...   187   2e-47
02_04_0125 - 19982330-19982538,19983507-19983633,19983978-199840...    32   0.80 
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203...    29   9.8  
01_03_0064 + 12159036-12159177,12159383-12159538,12159592-12159605     29   9.8  

>10_08_1011 +
           22234306-22234388,22235107-22235226,22235401-22235515,
           22235582-22235675,22236138-22236358
          Length = 210

 Score =  187 bits (455), Expect = 2e-47
 Identities = 90/184 (48%), Positives = 120/184 (65%), Gaps = 4/184 (2%)
 Frame = +2

Query: 224 MCYFCFDVLYCQLHSMEPPQTPKFTNEAYPLFVTWKI---GKEHRLRGCIGTFNAMHLHS 394
           M  +CFD L       +PP  P F    +PLFVTWK    G E RLRGCIGT  A  + +
Sbjct: 1   MAVYCFDALVSHYSGDQPPP-PAFEEGIHPLFVTWKKATNGSEPRLRGCIGTLEARQIVT 59

Query: 395 GLREYAITSALRDSRFSPITREEVPRLSVSVSILQHFEEAEHYLDWKLGKHGIRIEFVS- 571
           G +EYA+TSALRD RF PI  +E+P L  +VSIL  +E A ++LDW++GKHG+ IEF   
Sbjct: 60  GFKEYALTSALRDRRFPPIQSKELPYLECTVSILTEYETALNHLDWEVGKHGLIIEFTDP 119

Query: 572 ERGSKRTATYLPQVATEQGWDQIQTIDSLLRKGGYKAAITADLRRSIKLTRYQSEEVSAS 751
           +   +R+ATYLP+VA  +GW  ++TIDSL+RK GY   IT  LR+ +++TRYQS   +  
Sbjct: 120 DYNMRRSATYLPEVAAHEGWTHLETIDSLMRKAGYNGTITDSLRKKLRVTRYQSTLYTMH 179

Query: 752 YTDY 763
           Y +Y
Sbjct: 180 YGEY 183


>02_04_0125 -
           19982330-19982538,19983507-19983633,19983978-19984053,
           19984993-19985184,19985906-19986474
          Length = 390

 Score = 32.3 bits (70), Expect = 0.80
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
 Frame = +2

Query: 530 WKLGKHGIRIEFVSERGSKRTATYLPQVATEQGWDQIQTIDSLLRKGGYKAAI-----TA 694
           W+ G+ G  ++ V +R    + T +P+V +E GW  +       R+ G ++ +      A
Sbjct: 210 WEDGEGGAVLQEVKQRNGDESLTPIPEVVSEAGWWAVTGRSMGWRRSGQRSRVRKLQYIA 269

Query: 695 DLRRSI 712
           DL R++
Sbjct: 270 DLERTV 275


>07_01_0276 +
           2028983-2029070,2030084-2030151,2030317-2031246,
           2031334-2031415,2031544-2031609,2032606-2033304,
           2033422-2035424,2035599-2036173,2037060-2037223,
           2037306-2037365,2037475-2037839
          Length = 1699

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 5/81 (6%)
 Frame = +2

Query: 248 LYCQLHSMEPPQTPKFTNEAYPLFVTWKIGKEHRLRG-----CIGTFNAMHLHSGLREYA 412
           L   LHS E PQ P  +N   P +  +   K    RG       G+ N MH  S      
Sbjct: 734 LLAMLHSAEKPQAPA-SNSGLPAWSNYPEAKNLDPRGHGVDLTQGSLN-MHGASVQSSQQ 791

Query: 413 ITSALRDSRFSPITREEVPRL 475
            T+A++   F P+   ++  L
Sbjct: 792 ATTAIQQQNFMPLNMSQIAHL 812


>01_03_0064 + 12159036-12159177,12159383-12159538,12159592-12159605
          Length = 103

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 372 STLCTYIQACVNMLLQVL*ETLDFLL*QERKFRGSLSRCQSCSILK-KLNITLIG 533
           +T+C+ I A V MLLQ + E LDF++  E    GS SR +   +L+ +  + L+G
Sbjct: 48  ATVCSDINAAVEMLLQRMKE-LDFVVISEELIIGS-SRPEIMKLLREETGLRLLG 100


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,952,220
Number of Sequences: 37544
Number of extensions: 395713
Number of successful extensions: 833
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3747967944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)